Wall clock time and date at job start Sun Mar 7 2021 19:47:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.08996 * 109.47450 * 2 1 4 4 C 1.52998 * 109.46953 * 120.00464 * 2 1 3 5 5 C 1.53005 * 109.47084 * 179.97438 * 4 2 1 6 6 C 1.53004 * 109.47069 * 299.99748 * 5 4 2 7 7 H 1.08996 * 109.46933 * 300.00025 * 6 5 4 8 8 N 1.46495 * 109.46762 * 179.97438 * 6 5 4 9 9 C 1.34783 * 119.99956 * 85.00646 * 8 6 5 10 10 O 1.21282 * 119.99627 * 359.97438 * 9 8 6 11 11 C 1.50694 * 119.99752 * 179.97438 * 9 8 6 12 12 N 1.46507 * 109.46968 * 179.97438 * 11 9 8 13 13 C 1.36840 * 125.06023 * 265.21566 * 12 11 9 14 14 C 1.34231 * 109.93308 * 180.19399 * 13 12 11 15 15 C 1.50707 * 126.49675 * 179.89681 * 14 13 12 16 16 O 1.42903 * 109.46442 * 254.68647 * 15 14 13 17 17 Si 1.86293 * 109.47256 * 14.68214 * 15 14 13 18 18 C 1.46487 * 107.00314 * 359.62802 * 14 13 12 19 19 C 1.39587 * 134.03261 * 180.18435 * 18 14 13 20 20 C 1.36665 * 119.76404 * 180.02562 * 19 18 14 21 21 C 1.38785 * 120.52286 * 359.97438 * 20 19 18 22 22 C 1.37789 * 120.67120 * 0.02726 * 21 20 19 23 23 C 1.37684 * 125.06318 * 84.99928 * 12 11 9 24 24 C 1.52998 * 109.46961 * 60.00177 * 6 5 4 25 25 C 1.53004 * 109.47014 * 240.00097 * 2 1 3 26 26 H 1.08996 * 109.47450 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.47065 * 300.00281 * 1 2 3 28 28 H 1.09002 * 109.47122 * 59.99962 * 1 2 3 29 29 H 1.09004 * 109.47049 * 299.99292 * 4 2 1 30 30 H 1.08996 * 109.47421 * 59.99518 * 4 2 1 31 31 H 1.09002 * 109.47252 * 179.97438 * 5 4 2 32 32 H 1.08996 * 109.47264 * 59.99570 * 5 4 2 33 33 H 0.97000 * 120.00070 * 264.99643 * 8 6 5 34 34 H 1.09000 * 109.47212 * 60.00132 * 11 9 8 35 35 H 1.08998 * 109.47521 * 299.99636 * 11 9 8 36 36 H 1.08002 * 125.02923 * 0.08799 * 13 12 11 37 37 H 1.08999 * 109.47345 * 134.68718 * 15 14 13 38 38 H 0.96700 * 114.00311 * 60.00230 * 16 15 14 39 39 H 1.48501 * 109.99918 * 58.68485 * 17 15 14 40 40 H 1.48506 * 109.99973 * 180.02562 * 17 15 14 41 41 H 1.08004 * 120.11881 * 0.04069 * 19 18 14 42 42 H 1.08004 * 119.73817 * 179.97438 * 20 19 18 43 43 H 1.08002 * 119.66445 * 180.02562 * 21 20 19 44 44 H 1.07998 * 120.11001 * 179.97438 * 22 21 20 45 45 H 1.08998 * 109.47730 * 59.99708 * 24 6 5 46 46 H 1.09004 * 109.47049 * 180.02562 * 24 6 5 47 47 H 1.09002 * 109.47225 * 60.00003 * 25 2 1 48 48 H 1.08996 * 109.46933 * 300.00219 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7213 1.2492 5 6 3.5700 -0.7219 1.2489 6 6 4.0795 -1.4435 -0.0004 7 1 3.7157 -2.4710 -0.0002 8 7 5.5444 -1.4435 -0.0009 9 6 6.2186 -2.3996 0.6685 10 8 5.6123 -3.2596 1.2716 11 6 7.7255 -2.3998 0.6674 12 7 8.2142 -3.5307 1.4603 13 6 8.5652 -3.4711 2.7816 14 6 8.9736 -4.6788 3.2016 15 6 9.4453 -5.0333 4.5883 16 8 10.8660 -5.1873 4.5832 17 14 8.9723 -3.6743 5.7715 18 6 8.8678 -5.5883 2.0581 19 6 9.1361 -6.9451 1.8695 20 6 8.9274 -7.5141 0.6447 21 6 8.4499 -6.7538 -0.4136 22 6 8.1785 -5.4129 -0.2495 23 6 8.3846 -4.8128 0.9881 24 6 3.5695 -0.7222 -1.2496 25 6 2.0399 -0.7213 -1.2493 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.6767 -0.2075 2.1392 30 1 1.6765 -1.7489 1.2492 31 1 3.9333 -1.2354 2.1391 32 1 3.9337 0.3056 1.2487 33 1 6.0292 -0.7555 -0.4831 34 1 8.0893 -1.4684 1.1012 35 1 8.0882 -2.4899 -0.3565 36 1 8.5217 -2.5833 3.3951 37 1 8.9797 -5.9673 4.9028 38 1 11.3468 -4.3932 4.3126 39 1 7.4997 -3.4826 5.7622 40 1 9.4324 -4.0116 7.1426 41 1 9.5073 -7.5431 2.6888 42 1 9.1355 -8.5639 0.4991 43 1 8.2895 -7.2178 -1.3756 44 1 7.8076 -4.8296 -1.0794 45 1 3.9331 0.3053 -1.2498 46 1 3.9321 -1.2365 -2.1396 47 1 1.6766 -0.2074 -2.1393 48 1 1.6766 -1.7489 -1.2493 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:47:31 Heat of formation + Delta-G solvation = -16.406749 kcal Electronic energy + Delta-G solvation = -28297.273229 eV Core-core repulsion = 24511.415918 eV Total energy + Delta-G solvation = -3785.857311 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -42.47110 -41.04924 -39.39271 -37.97587 -37.50606 -35.76682 -34.07030 -32.40806 -31.89306 -31.20932 -30.10754 -28.98376 -26.92375 -25.53247 -23.88799 -23.63911 -22.80588 -22.18476 -21.61323 -20.89209 -20.52540 -18.63198 -18.41642 -17.73811 -17.35392 -16.91347 -16.39980 -16.31512 -16.00280 -15.80153 -15.38435 -15.33526 -15.27831 -15.18968 -14.77224 -14.58900 -14.40988 -14.32314 -13.90845 -13.77176 -13.61107 -13.38691 -13.32108 -13.21033 -12.65529 -12.57536 -12.44716 -12.21945 -12.10803 -12.04460 -12.00018 -11.78931 -11.66452 -11.43084 -11.23834 -10.99139 -10.40227 -10.21200 -10.17746 -9.01034 -8.51353 -5.01690 0.29045 0.80627 1.39368 1.42287 1.46064 1.67805 1.79507 2.07648 2.13666 3.12661 3.43299 3.49479 3.56551 3.60169 3.66282 3.75847 3.81475 3.83176 3.87304 3.96188 4.06593 4.08988 4.27907 4.32359 4.34188 4.38249 4.39389 4.43652 4.59512 4.64798 4.66727 4.72509 4.80894 4.81900 4.87658 4.91429 4.92567 4.99652 5.03802 5.05771 5.12800 5.20892 5.26464 5.27706 5.36399 5.43510 5.65711 5.82020 5.87538 5.91132 6.18348 6.33760 6.38828 6.76905 7.04213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.094 4.094 3 H 0.071 0.929 4 C -0.113 4.113 5 C -0.128 4.128 6 C 0.146 3.854 7 H 0.088 0.912 8 N -0.726 5.726 9 C 0.490 3.510 10 O -0.513 6.513 11 C 0.091 3.909 12 N -0.466 5.466 13 C 0.069 3.931 14 C -0.198 4.198 15 C -0.028 4.028 16 O -0.542 6.542 17 Si 0.682 3.318 18 C -0.087 4.087 19 C -0.066 4.066 20 C -0.146 4.146 21 C -0.097 4.097 22 C -0.128 4.128 23 C 0.109 3.891 24 C -0.126 4.126 25 C -0.112 4.112 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.055 0.945 29 H 0.066 0.934 30 H 0.065 0.935 31 H 0.066 0.934 32 H 0.064 0.936 33 H 0.401 0.599 34 H 0.123 0.877 35 H 0.118 0.882 36 H 0.171 0.829 37 H 0.111 0.889 38 H 0.376 0.624 39 H -0.256 1.256 40 H -0.254 1.254 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.125 0.875 44 H 0.114 0.886 45 H 0.069 0.931 46 H 0.069 0.931 47 H 0.069 0.931 48 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.611 7.370 -4.134 8.472 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.151 4.151 5 C -0.167 4.167 6 C 0.042 3.958 7 H 0.106 0.894 8 N -0.378 5.378 9 C 0.274 3.726 10 O -0.387 6.387 11 C -0.035 4.035 12 N -0.149 5.149 13 C -0.056 4.056 14 C -0.206 4.206 15 C -0.140 4.140 16 O -0.347 6.347 17 Si 0.583 3.417 18 C -0.091 4.091 19 C -0.085 4.085 20 C -0.165 4.165 21 C -0.116 4.116 22 C -0.148 4.148 23 C 0.005 3.995 24 C -0.164 4.164 25 C -0.150 4.150 26 H 0.074 0.926 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.085 0.915 30 H 0.083 0.917 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.235 0.765 34 H 0.141 0.859 35 H 0.135 0.865 36 H 0.188 0.812 37 H 0.128 0.872 38 H 0.223 0.777 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.143 0.857 44 H 0.132 0.868 45 H 0.088 0.912 46 H 0.088 0.912 47 H 0.088 0.912 48 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -0.554 6.615 -2.918 7.251 hybrid contribution -0.097 -0.077 -0.629 0.641 sum -0.651 6.539 -3.546 7.467 Atomic orbital electron populations 1.21838 0.94930 1.02044 1.01888 1.21180 0.95799 0.99619 0.94655 0.91076 1.21566 0.94494 1.01156 0.97873 1.21908 0.96139 1.00648 0.97995 1.21039 0.78439 1.01093 0.95236 0.89386 1.46067 1.07568 1.30519 1.53686 1.21029 0.90214 0.81841 0.79519 1.90816 1.69605 1.36497 1.41806 1.21603 0.92013 0.90736 0.99150 1.43210 1.55840 1.06818 1.09031 1.21500 1.01324 0.98857 0.83876 1.20625 1.11160 0.92735 0.96032 1.24324 0.84392 1.08275 0.96981 1.86501 1.16080 1.41270 1.90836 0.95418 0.82146 0.84950 0.79170 1.18944 1.04039 0.93594 0.92518 1.20308 0.98121 0.92652 0.97372 1.20668 1.02670 1.00080 0.93067 1.20821 0.98899 0.92823 0.99079 1.19951 1.05304 0.95349 0.94221 1.18158 1.02211 0.83762 0.95408 1.21799 0.96797 1.00867 0.96912 1.21546 0.93979 1.01346 0.98115 0.92568 0.92546 0.92542 0.91503 0.91657 0.91504 0.91699 0.76492 0.85876 0.86453 0.81246 0.87196 0.77726 1.18068 1.17895 0.85986 0.85944 0.85744 0.86768 0.91221 0.91192 0.91215 0.91552 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.19 9.19 37.16 0.34 0.54 16 2 C -0.09 0.14 2.72 -90.62 -0.25 -0.10 16 3 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 4 C -0.11 0.08 5.20 -26.73 -0.14 -0.06 16 5 C -0.13 0.07 5.49 -26.73 -0.15 -0.07 16 6 C 0.15 -0.14 2.45 -67.93 -0.17 -0.31 16 7 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 8 N -0.73 1.70 5.08 -53.81 -0.27 1.43 16 9 C 0.49 0.14 7.86 -10.99 -0.09 0.06 16 10 O -0.51 -2.88 16.09 5.56 0.09 -2.79 16 11 C 0.09 -0.22 6.48 -5.19 -0.03 -0.26 16 12 N -0.47 -0.62 2.27 -115.71 -0.26 -0.89 16 13 C 0.07 0.06 9.89 -16.73 -0.17 -0.11 16 14 C -0.20 -0.52 5.58 -102.71 -0.57 -1.10 16 15 C -0.03 -0.05 3.06 36.01 0.11 0.06 16 16 O -0.54 -0.96 12.88 -35.23 -0.45 -1.41 16 17 Si 0.68 0.01 30.75 -169.99 -5.23 -5.22 16 18 C -0.09 -0.40 6.35 -105.14 -0.67 -1.06 16 19 C -0.07 -0.27 10.05 -39.65 -0.40 -0.67 16 20 C -0.15 -0.44 9.97 -39.95 -0.40 -0.84 16 21 C -0.10 -0.25 10.01 -39.54 -0.40 -0.64 16 22 C -0.13 -0.37 10.00 -39.43 -0.39 -0.76 16 23 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 24 C -0.13 0.33 5.39 -26.76 -0.14 0.19 16 25 C -0.11 0.21 5.20 -26.75 -0.14 0.08 16 26 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.06 -0.07 8.14 -51.92 -0.42 -0.49 16 28 H 0.06 -0.08 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 0.11 8.14 -51.93 -0.42 -0.32 16 32 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.40 -2.22 8.60 -40.82 -0.35 -2.57 16 34 H 0.12 -0.73 8.12 -51.93 -0.42 -1.15 16 35 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 36 H 0.17 -0.46 6.34 -52.49 -0.33 -0.79 16 37 H 0.11 0.30 7.96 -51.93 -0.41 -0.11 16 38 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 39 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 40 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 41 H 0.12 0.39 8.06 -52.48 -0.42 -0.03 16 42 H 0.12 0.13 8.06 -52.48 -0.42 -0.29 16 43 H 0.12 0.04 8.06 -52.49 -0.42 -0.38 16 44 H 0.11 0.10 8.06 -52.49 -0.42 -0.32 16 45 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 48 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 388.36 15.07 5.85 5.85 Total: 0.00 -10.07 388.36 -12.39 -22.46 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -7.90 Total: -14.20 kcal Atomic # 6 Polarization: -1.02 SS G_CDS: -4.22 Total: -5.23 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.54 Total: 0.54 kcal Atomic # 8 Polarization: -3.83 SS G_CDS: -0.36 Total: -4.20 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.23 Total: -5.22 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -10.07 -12.39 -22.46 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.050 kcal (2) G-P(sol) polarization free energy of solvation -10.066 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds