Wall clock time and date at job start Sun Mar 7 2021 19:47:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.08996 * 109.47450 * 2 1 4 4 C 1.52998 * 109.46953 * 120.00464 * 2 1 3 5 5 C 1.53005 * 109.47084 * 179.97438 * 4 2 1 6 6 C 1.53004 * 109.47069 * 299.99748 * 5 4 2 7 7 H 1.08996 * 109.46933 * 300.00025 * 6 5 4 8 8 N 1.46495 * 109.46762 * 179.97438 * 6 5 4 9 9 C 1.34783 * 119.99956 * 85.00646 * 8 6 5 10 10 O 1.21282 * 119.99627 * 359.97438 * 9 8 6 11 11 C 1.50694 * 119.99752 * 179.97438 * 9 8 6 12 12 N 1.46507 * 109.46968 * 179.97438 * 11 9 8 13 13 C 1.36840 * 125.06023 * 265.21566 * 12 11 9 14 14 C 1.34231 * 109.93308 * 180.19399 * 13 12 11 15 15 C 1.50707 * 126.49675 * 179.89681 * 14 13 12 16 16 O 1.42903 * 109.46442 * 254.68647 * 15 14 13 17 17 Si 1.86293 * 109.47256 * 14.68214 * 15 14 13 18 18 C 1.46487 * 107.00314 * 359.62802 * 14 13 12 19 19 C 1.39587 * 134.03261 * 180.18435 * 18 14 13 20 20 C 1.36665 * 119.76404 * 180.02562 * 19 18 14 21 21 C 1.38785 * 120.52286 * 359.97438 * 20 19 18 22 22 C 1.37789 * 120.67120 * 0.02726 * 21 20 19 23 23 C 1.37684 * 125.06318 * 84.99928 * 12 11 9 24 24 C 1.52998 * 109.46961 * 60.00177 * 6 5 4 25 25 C 1.53004 * 109.47014 * 240.00097 * 2 1 3 26 26 H 1.08996 * 109.47450 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.47065 * 300.00281 * 1 2 3 28 28 H 1.09002 * 109.47122 * 59.99962 * 1 2 3 29 29 H 1.09004 * 109.47049 * 299.99292 * 4 2 1 30 30 H 1.08996 * 109.47421 * 59.99518 * 4 2 1 31 31 H 1.09002 * 109.47252 * 179.97438 * 5 4 2 32 32 H 1.08996 * 109.47264 * 59.99570 * 5 4 2 33 33 H 0.97000 * 120.00070 * 264.99643 * 8 6 5 34 34 H 1.09000 * 109.47212 * 60.00132 * 11 9 8 35 35 H 1.08998 * 109.47521 * 299.99636 * 11 9 8 36 36 H 1.08002 * 125.02923 * 0.08799 * 13 12 11 37 37 H 1.08999 * 109.47345 * 134.68718 * 15 14 13 38 38 H 0.96700 * 114.00311 * 60.00230 * 16 15 14 39 39 H 1.48501 * 109.99918 * 58.68485 * 17 15 14 40 40 H 1.48506 * 109.99973 * 180.02562 * 17 15 14 41 41 H 1.08004 * 120.11881 * 0.04069 * 19 18 14 42 42 H 1.08004 * 119.73817 * 179.97438 * 20 19 18 43 43 H 1.08002 * 119.66445 * 180.02562 * 21 20 19 44 44 H 1.07998 * 120.11001 * 179.97438 * 22 21 20 45 45 H 1.08998 * 109.47730 * 59.99708 * 24 6 5 46 46 H 1.09004 * 109.47049 * 180.02562 * 24 6 5 47 47 H 1.09002 * 109.47225 * 60.00003 * 25 2 1 48 48 H 1.08996 * 109.46933 * 300.00219 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7213 1.2492 5 6 3.5700 -0.7219 1.2489 6 6 4.0795 -1.4435 -0.0004 7 1 3.7157 -2.4710 -0.0002 8 7 5.5444 -1.4435 -0.0009 9 6 6.2186 -2.3996 0.6685 10 8 5.6123 -3.2596 1.2716 11 6 7.7255 -2.3998 0.6674 12 7 8.2142 -3.5307 1.4603 13 6 8.5652 -3.4711 2.7816 14 6 8.9736 -4.6788 3.2016 15 6 9.4453 -5.0333 4.5883 16 8 10.8660 -5.1873 4.5832 17 14 8.9723 -3.6743 5.7715 18 6 8.8678 -5.5883 2.0581 19 6 9.1361 -6.9451 1.8695 20 6 8.9274 -7.5141 0.6447 21 6 8.4499 -6.7538 -0.4136 22 6 8.1785 -5.4129 -0.2495 23 6 8.3846 -4.8128 0.9881 24 6 3.5695 -0.7222 -1.2496 25 6 2.0399 -0.7213 -1.2493 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 1.6767 -0.2075 2.1392 30 1 1.6765 -1.7489 1.2492 31 1 3.9333 -1.2354 2.1391 32 1 3.9337 0.3056 1.2487 33 1 6.0292 -0.7555 -0.4831 34 1 8.0893 -1.4684 1.1012 35 1 8.0882 -2.4899 -0.3565 36 1 8.5217 -2.5833 3.3951 37 1 8.9797 -5.9673 4.9028 38 1 11.3468 -4.3932 4.3126 39 1 7.4997 -3.4826 5.7622 40 1 9.4324 -4.0116 7.1426 41 1 9.5073 -7.5431 2.6888 42 1 9.1355 -8.5639 0.4991 43 1 8.2895 -7.2178 -1.3756 44 1 7.8076 -4.8296 -1.0794 45 1 3.9331 0.3053 -1.2498 46 1 3.9321 -1.2365 -2.1396 47 1 1.6766 -0.2074 -2.1393 48 1 1.6766 -1.7489 -1.2493 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 19:47:29 Heat of formation + Delta-G solvation = -14.601569 kcal Electronic energy + Delta-G solvation = -28297.194951 eV Core-core repulsion = 24511.415918 eV Total energy + Delta-G solvation = -3785.779032 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.178 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.54497 -41.04181 -39.36896 -38.10507 -37.60273 -35.75405 -34.11308 -32.37950 -31.79583 -31.29398 -30.24687 -28.98999 -26.88370 -25.57707 -23.83200 -23.74354 -22.86476 -22.17858 -21.59816 -20.84810 -20.58672 -18.65421 -18.39772 -17.80068 -17.37091 -16.92227 -16.45057 -16.39345 -16.05767 -15.84562 -15.40348 -15.27566 -15.24230 -15.18369 -14.89044 -14.71964 -14.46249 -14.29375 -14.07012 -13.71630 -13.63977 -13.28536 -13.22154 -13.12496 -12.72757 -12.59956 -12.55999 -12.27571 -12.13847 -12.13301 -11.95807 -11.83557 -11.71945 -11.34575 -11.17704 -11.02788 -10.55812 -10.32095 -10.13678 -9.17217 -8.63883 -5.06951 0.12601 0.61551 1.32924 1.42293 1.46658 1.63280 1.74709 1.98474 2.21126 2.92932 3.55565 3.61234 3.66377 3.66864 3.71543 3.73710 3.86448 3.91413 4.03407 4.06892 4.15575 4.16206 4.20099 4.28388 4.37982 4.41128 4.47021 4.50484 4.53846 4.54717 4.69924 4.72855 4.76717 4.77271 4.86684 4.92327 4.97256 5.06262 5.10881 5.11482 5.15051 5.20298 5.30978 5.37096 5.44739 5.48643 5.53153 5.64024 5.71682 5.73873 6.18919 6.22763 6.49696 6.88320 7.16161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.089 4.089 3 H 0.081 0.919 4 C -0.113 4.113 5 C -0.122 4.122 6 C 0.148 3.852 7 H 0.054 0.946 8 N -0.708 5.708 9 C 0.489 3.511 10 O -0.576 6.576 11 C 0.089 3.911 12 N -0.466 5.466 13 C 0.080 3.920 14 C -0.225 4.225 15 C -0.041 4.041 16 O -0.560 6.560 17 Si 0.802 3.198 18 C -0.118 4.118 19 C -0.091 4.091 20 C -0.154 4.154 21 C -0.109 4.109 22 C -0.134 4.134 23 C 0.091 3.909 24 C -0.117 4.117 25 C -0.113 4.113 26 H 0.047 0.953 27 H 0.054 0.946 28 H 0.061 0.939 29 H 0.065 0.935 30 H 0.047 0.953 31 H 0.040 0.960 32 H 0.082 0.918 33 H 0.421 0.579 34 H 0.169 0.831 35 H 0.144 0.856 36 H 0.208 0.792 37 H 0.087 0.913 38 H 0.394 0.606 39 H -0.296 1.296 40 H -0.297 1.297 41 H 0.116 0.884 42 H 0.136 0.864 43 H 0.146 0.854 44 H 0.133 0.867 45 H 0.089 0.911 46 H 0.075 0.925 47 H 0.079 0.921 48 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.266 10.255 -5.552 11.730 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.108 4.108 3 H 0.099 0.901 4 C -0.151 4.151 5 C -0.160 4.160 6 C 0.043 3.957 7 H 0.072 0.928 8 N -0.361 5.361 9 C 0.275 3.725 10 O -0.454 6.454 11 C -0.036 4.036 12 N -0.148 5.148 13 C -0.046 4.046 14 C -0.233 4.233 15 C -0.150 4.150 16 O -0.367 6.367 17 Si 0.707 3.293 18 C -0.122 4.122 19 C -0.110 4.110 20 C -0.173 4.173 21 C -0.128 4.128 22 C -0.154 4.154 23 C -0.015 4.015 24 C -0.155 4.155 25 C -0.151 4.151 26 H 0.066 0.934 27 H 0.073 0.927 28 H 0.080 0.920 29 H 0.084 0.916 30 H 0.066 0.934 31 H 0.059 0.941 32 H 0.100 0.900 33 H 0.259 0.741 34 H 0.186 0.814 35 H 0.162 0.838 36 H 0.224 0.776 37 H 0.105 0.895 38 H 0.243 0.757 39 H -0.224 1.224 40 H -0.224 1.224 41 H 0.134 0.866 42 H 0.154 0.846 43 H 0.163 0.837 44 H 0.151 0.849 45 H 0.108 0.892 46 H 0.094 0.906 47 H 0.098 0.902 48 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 0.137 9.545 -4.409 10.516 hybrid contribution -0.357 -1.003 -0.188 1.081 sum -0.220 8.543 -4.598 9.704 Atomic orbital electron populations 1.21848 0.95227 1.01618 1.02116 1.21149 0.95547 0.99924 0.94161 0.90054 1.21555 0.94652 1.00312 0.98586 1.21832 0.96011 1.01155 0.97037 1.20910 0.79254 0.99424 0.96066 0.92775 1.45911 1.07060 1.30331 1.52790 1.21551 0.91394 0.81101 0.78497 1.90806 1.70994 1.38974 1.44627 1.22018 0.89715 0.91165 1.00684 1.43462 1.55068 1.06925 1.09393 1.22063 0.99099 0.99383 0.84037 1.20784 1.13037 0.93392 0.96049 1.24571 0.84377 1.08441 0.97640 1.86451 1.16309 1.42989 1.90987 0.94137 0.77890 0.82285 0.74979 1.19376 1.04699 0.94148 0.94014 1.20450 0.99487 0.93168 0.97890 1.20912 1.02497 1.00916 0.92960 1.21128 0.98800 0.93048 0.99802 1.20252 1.04806 0.95708 0.94625 1.18389 1.02539 0.85014 0.95513 1.21745 0.96094 1.01728 0.95905 1.21556 0.94640 1.00644 0.98256 0.93359 0.92654 0.91951 0.91592 0.93399 0.94114 0.89987 0.74119 0.81401 0.83813 0.77591 0.89501 0.75676 1.22365 1.22440 0.86569 0.84630 0.83672 0.84910 0.89195 0.90641 0.90242 0.92892 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 9.19 71.98 0.66 1.04 16 2 C -0.09 0.31 2.72 -10.79 -0.03 0.28 16 3 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 4 C -0.11 0.06 5.20 30.60 0.16 0.22 16 5 C -0.12 0.12 5.49 30.60 0.17 0.29 16 6 C 0.15 -0.30 2.45 44.99 0.11 -0.19 16 7 H 0.05 0.29 7.58 -2.39 -0.02 0.27 16 8 N -0.71 4.29 5.08 -442.54 -2.25 2.05 16 9 C 0.49 -0.07 7.86 87.65 0.69 0.62 16 10 O -0.58 -7.19 16.09 -3.04 -0.05 -7.24 16 11 C 0.09 -0.64 6.48 85.63 0.56 -0.08 16 12 N -0.47 -0.90 2.27 -520.00 -1.18 -2.08 16 13 C 0.08 0.09 9.89 83.00 0.82 0.91 16 14 C -0.23 -1.45 5.58 -18.63 -0.10 -1.55 16 15 C -0.04 -0.20 3.06 71.24 0.22 0.02 16 16 O -0.56 -2.59 12.88 -148.98 -1.92 -4.51 16 17 Si 0.80 0.13 30.75 68.60 2.11 2.24 16 18 C -0.12 -1.31 6.35 -20.20 -0.13 -1.44 16 19 C -0.09 -1.01 10.05 22.23 0.22 -0.78 16 20 C -0.15 -1.21 9.97 22.03 0.22 -0.99 16 21 C -0.11 -0.65 10.01 22.29 0.22 -0.42 16 22 C -0.13 -0.82 10.00 22.37 0.22 -0.60 16 23 C 0.09 0.73 6.80 39.03 0.27 1.00 16 24 C -0.12 0.78 5.39 30.58 0.16 0.94 16 25 C -0.11 0.49 5.20 30.58 0.16 0.65 16 26 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 27 H 0.05 -0.12 8.14 -2.38 -0.02 -0.14 16 28 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 29 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 30 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 31 H 0.04 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 33 H 0.42 -5.90 8.60 -92.71 -0.80 -6.70 16 34 H 0.17 -2.72 8.12 -2.39 -0.02 -2.74 16 35 H 0.14 -1.76 8.14 -2.39 -0.02 -1.78 16 36 H 0.21 -1.60 6.34 -2.91 -0.02 -1.62 16 37 H 0.09 0.75 7.96 -2.39 -0.02 0.73 16 38 H 0.39 -1.82 8.70 -74.06 -0.64 -2.46 16 39 H -0.30 -2.02 7.11 99.48 0.71 -1.31 16 40 H -0.30 -2.09 7.11 99.48 0.71 -1.39 16 41 H 0.12 1.19 8.06 -2.91 -0.02 1.17 16 42 H 0.14 0.51 8.06 -2.91 -0.02 0.48 16 43 H 0.15 0.10 8.06 -2.91 -0.02 0.07 16 44 H 0.13 0.16 8.06 -2.91 -0.02 0.13 16 45 H 0.09 -0.91 8.14 -2.39 -0.02 -0.92 16 46 H 0.07 -0.54 8.14 -2.39 -0.02 -0.56 16 47 H 0.08 -0.47 8.14 -2.39 -0.02 -0.49 16 48 H 0.05 -0.08 8.14 -2.39 -0.02 -0.10 16 Total: 0.00 -28.74 388.36 0.87 -27.87 By element: Atomic # 1 Polarization: -17.78 SS G_CDS: -0.45 Total: -18.23 kcal Atomic # 6 Polarization: -4.69 SS G_CDS: 4.60 Total: -0.09 kcal Atomic # 7 Polarization: 3.39 SS G_CDS: -3.43 Total: -0.03 kcal Atomic # 8 Polarization: -9.79 SS G_CDS: -1.97 Total: -11.75 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: 2.11 Total: 2.24 kcal Total: -28.74 0.87 -27.87 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.273 kcal (2) G-P(sol) polarization free energy of solvation -28.741 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.874 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds