Wall clock time and date at job start Mon Mar 8 2021 02:31:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 O 1.42898 * 109.47351 * 2 1 4 4 C 1.35905 * 116.99652 * 275.32445 * 3 2 1 5 5 C 1.38733 * 120.05675 * 5.08761 * 4 3 2 6 6 C 1.38142 * 119.94262 * 179.70110 * 5 4 3 7 7 C 1.38265 * 120.05695 * 0.59038 * 6 5 4 8 8 C 1.50701 * 119.94943 * 179.70054 * 7 6 5 9 9 O 1.42893 * 109.47192 * 119.97544 * 8 7 6 10 10 Si 1.86308 * 109.46663 * 359.97438 * 8 7 6 11 11 C 1.38267 * 120.11251 * 359.68479 * 7 6 5 12 12 C 1.38149 * 120.05408 * 0.02562 * 11 7 6 13 13 C 1.50696 * 109.47017 * 120.00054 * 2 1 3 14 14 O 1.21287 * 120.00001 * 244.99679 * 13 2 1 15 15 N 1.34769 * 120.00470 * 64.99688 * 13 2 1 16 16 C 1.46503 * 120.00549 * 179.97438 * 15 13 2 17 17 H 1.09007 * 109.46389 * 35.00442 * 16 15 13 18 18 C 1.53000 * 109.47553 * 154.99914 * 16 15 13 19 19 C 1.53007 * 109.46860 * 60.00340 * 18 16 15 20 20 C 1.52997 * 109.47009 * 59.99923 * 19 18 16 21 21 H 1.09001 * 109.47166 * 60.00111 * 20 19 18 22 22 C 1.52997 * 109.47030 * 179.97438 * 20 19 18 23 23 O 1.42904 * 109.46841 * 185.00274 * 22 20 19 24 24 C 1.53003 * 109.47219 * 300.00102 * 20 19 18 25 25 C 1.52997 * 109.47178 * 275.00520 * 16 15 13 26 26 H 1.09001 * 109.47379 * 60.00078 * 1 2 3 27 27 H 1.08994 * 109.47248 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.47165 * 300.00305 * 1 2 3 29 29 H 1.08998 * 109.46673 * 239.99775 * 2 1 3 30 30 H 1.07993 * 120.02729 * 359.97438 * 5 4 3 31 31 H 1.07998 * 119.97237 * 180.26919 * 6 5 4 32 32 H 1.08996 * 109.47367 * 239.98647 * 8 7 6 33 33 H 0.96701 * 114.00257 * 180.02562 * 9 8 7 34 34 H 1.48500 * 109.99855 * 298.67576 * 10 8 7 35 35 H 1.48494 * 110.00058 * 59.99967 * 10 8 7 36 36 H 1.07997 * 119.97969 * 180.02562 * 11 7 6 37 37 H 1.07997 * 120.02808 * 179.97438 * 12 11 7 38 38 H 0.97006 * 119.99877 * 0.02562 * 15 13 2 39 39 H 1.08998 * 109.47181 * 300.00600 * 18 16 15 40 40 H 1.08997 * 109.47595 * 180.02562 * 18 16 15 41 41 H 1.09001 * 109.47066 * 299.99973 * 19 18 16 42 42 H 1.08993 * 109.47178 * 180.02562 * 19 18 16 43 43 H 1.08996 * 109.47508 * 65.00410 * 22 20 19 44 44 H 1.08994 * 109.47491 * 304.99898 * 22 20 19 45 45 H 0.96702 * 113.99780 * 180.02562 * 23 22 20 46 46 H 1.09007 * 109.47102 * 179.97438 * 24 20 19 47 47 H 1.08997 * 109.47396 * 299.99727 * 24 20 19 48 48 H 1.08993 * 109.47352 * 59.99661 * 25 16 15 49 49 H 1.09001 * 109.47166 * 179.97438 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1061 1.9663 -1.2057 5 6 1.6543 1.3302 -2.3529 6 6 1.7512 1.9642 -3.5764 7 6 2.3089 3.2266 -3.6600 8 6 2.4196 3.9132 -4.9970 9 8 1.6856 5.1388 -4.9652 10 14 1.7223 2.8059 -6.3232 11 6 2.7651 3.8604 -2.5190 12 6 2.6651 3.2331 -1.2922 13 6 2.0323 -0.7104 1.2304 14 8 2.6530 -0.0979 2.0734 15 7 1.7918 -2.0263 1.3942 16 6 2.2806 -2.7171 2.5901 17 1 2.2338 -2.0416 3.4444 18 6 1.4088 -3.9446 2.8623 19 6 1.4744 -4.8927 1.6632 20 6 2.9223 -5.3345 1.4410 21 1 3.2860 -5.8484 2.3308 22 6 2.9878 -6.2831 0.2424 23 8 4.3181 -6.7868 0.1058 24 6 3.7941 -4.1069 1.1689 25 6 3.7285 -3.1589 2.3680 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 1.8932 -0.5139 -0.8900 30 1 1.2233 0.3421 -2.2888 31 1 1.3957 1.4713 -4.4692 32 1 3.4673 4.1225 -5.2124 33 1 1.7124 5.6350 -5.7948 34 1 2.4974 1.5409 -6.3879 35 1 0.2942 2.5128 -6.0412 36 1 3.2000 4.8466 -2.5867 37 1 3.0219 3.7284 -0.4013 38 1 1.2957 -2.5163 0.7199 39 1 0.3774 -3.6298 3.0206 40 1 1.7722 -4.4583 3.7523 41 1 1.1107 -4.3788 0.7734 42 1 0.8531 -5.7670 1.8568 43 1 2.7086 -5.7443 -0.6631 44 1 2.2991 -7.1134 0.3980 45 1 4.4337 -7.3960 -0.6363 46 1 4.8257 -4.4217 1.0111 47 1 3.4305 -3.5930 0.2791 48 1 4.3495 -2.2844 2.1741 49 1 4.0923 -3.6724 3.2579 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_10157680.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:31:25 Heat of formation + Delta-G solvation = -132.295131 kcal Electronic energy + Delta-G solvation = -29636.574131 eV Core-core repulsion = 25530.205331 eV Total energy + Delta-G solvation = -4106.368800 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.87479 -41.04908 -39.73803 -38.80369 -37.53918 -37.18305 -34.96749 -33.53132 -32.06454 -31.91507 -31.76545 -31.05367 -26.86733 -26.49991 -25.38301 -24.18052 -23.79312 -22.60159 -22.16051 -21.57869 -20.28272 -19.49213 -18.74826 -18.37582 -18.27514 -17.26609 -16.94692 -16.78766 -16.67391 -16.43557 -15.93254 -15.78718 -15.71164 -15.45769 -15.20927 -14.94335 -14.80687 -14.54592 -14.28542 -14.01026 -13.95335 -13.74807 -13.59993 -13.51292 -13.37063 -13.29600 -13.13483 -12.93674 -12.57872 -12.44650 -12.29232 -12.12032 -11.90456 -11.82914 -11.68064 -11.43218 -11.22273 -10.94755 -10.77341 -10.33040 -10.12006 -10.04362 -9.18010 -5.00262 0.27282 0.29373 1.26421 1.49328 1.51362 1.60169 1.93573 2.47715 2.62858 3.08262 3.36911 3.39749 3.51384 3.56706 3.60699 3.69643 3.70451 3.78463 3.81048 3.91637 3.92875 4.11632 4.19061 4.24577 4.26476 4.32053 4.33369 4.36427 4.39465 4.44190 4.49238 4.50666 4.55685 4.62910 4.65133 4.85927 4.87522 4.92377 4.92822 4.98618 5.00308 5.16486 5.18824 5.23629 5.31162 5.32875 5.44702 5.50138 5.67769 6.24089 6.39796 6.59387 6.62272 7.11885 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.065 3.935 3 O -0.282 6.282 4 C 0.136 3.864 5 C -0.207 4.207 6 C -0.083 4.083 7 C -0.113 4.113 8 C -0.066 4.066 9 O -0.546 6.546 10 Si 0.681 3.319 11 C -0.047 4.047 12 C -0.144 4.144 13 C 0.520 3.480 14 O -0.511 6.511 15 N -0.719 5.719 16 C 0.147 3.853 17 H 0.092 0.908 18 C -0.126 4.126 19 C -0.115 4.115 20 C -0.089 4.089 21 H 0.081 0.919 22 C 0.079 3.921 23 O -0.572 6.572 24 C -0.108 4.108 25 C -0.133 4.133 26 H 0.077 0.923 27 H 0.079 0.921 28 H 0.078 0.922 29 H 0.098 0.902 30 H 0.132 0.868 31 H 0.120 0.880 32 H 0.074 0.926 33 H 0.382 0.618 34 H -0.256 1.256 35 H -0.251 1.251 36 H 0.137 0.863 37 H 0.138 0.862 38 H 0.399 0.601 39 H 0.074 0.926 40 H 0.084 0.916 41 H 0.060 0.940 42 H 0.071 0.929 43 H 0.043 0.957 44 H 0.046 0.954 45 H 0.380 0.620 46 H 0.071 0.929 47 H 0.057 0.943 48 H 0.070 0.930 49 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.487 -3.529 -5.636 7.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.005 3.995 3 O -0.194 6.194 4 C 0.090 3.910 5 C -0.225 4.225 6 C -0.100 4.100 7 C -0.113 4.113 8 C -0.177 4.177 9 O -0.352 6.352 10 Si 0.583 3.417 11 C -0.065 4.065 12 C -0.163 4.163 13 C 0.304 3.696 14 O -0.384 6.384 15 N -0.374 5.374 16 C 0.043 3.957 17 H 0.110 0.890 18 C -0.164 4.164 19 C -0.152 4.152 20 C -0.108 4.108 21 H 0.099 0.901 22 C 0.001 3.999 23 O -0.378 6.378 24 C -0.146 4.146 25 C -0.172 4.172 26 H 0.096 0.904 27 H 0.098 0.902 28 H 0.097 0.903 29 H 0.115 0.885 30 H 0.150 0.850 31 H 0.137 0.863 32 H 0.092 0.908 33 H 0.229 0.771 34 H -0.181 1.181 35 H -0.176 1.176 36 H 0.154 0.846 37 H 0.156 0.844 38 H 0.234 0.766 39 H 0.092 0.908 40 H 0.102 0.898 41 H 0.079 0.921 42 H 0.090 0.910 43 H 0.062 0.938 44 H 0.064 0.936 45 H 0.227 0.773 46 H 0.090 0.910 47 H 0.076 0.924 48 H 0.088 0.912 49 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -2.383 -3.595 -3.846 5.779 hybrid contribution -0.251 -0.786 -0.537 0.984 sum -2.635 -4.381 -4.382 6.734 Atomic orbital electron populations 1.22354 0.92332 1.03869 1.04942 1.22208 0.95950 0.83261 0.98093 1.86235 1.80853 1.25420 1.26889 1.19055 0.95146 0.92871 0.83889 1.21134 1.07392 1.01703 0.92288 1.20626 0.97824 0.94759 0.96811 1.19260 1.02768 0.94744 0.94546 1.24604 0.99433 0.92789 1.00887 1.86494 1.73992 1.34271 1.40477 0.95349 0.80340 0.80070 0.85944 1.20845 0.96140 0.99126 0.90385 1.20557 1.03171 0.93515 0.99035 1.20030 0.80002 0.82233 0.87374 1.90774 1.38707 1.65765 1.43170 1.45985 1.58243 1.08595 1.24564 1.21011 0.93527 0.93411 0.87763 0.89008 1.21817 1.00334 0.95111 0.99105 1.21525 0.95929 0.99524 0.98265 1.21190 0.95515 0.95750 0.98324 0.90067 1.22225 0.83864 0.96147 0.97652 1.86484 1.29589 1.66598 1.55126 1.21479 1.00647 0.94646 0.97781 1.21952 0.96087 0.99816 0.99301 0.90364 0.90246 0.90303 0.88468 0.85012 0.86266 0.90823 0.77065 1.18109 1.17597 0.84554 0.84413 0.76583 0.90773 0.89773 0.92094 0.91012 0.93834 0.93615 0.77256 0.90987 0.92400 0.91173 0.90622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.23 9.12 37.16 0.34 0.57 16 2 C 0.07 0.05 2.64 -27.89 -0.07 -0.02 16 3 O -0.28 -1.17 9.34 -39.30 -0.37 -1.54 16 4 C 0.14 0.47 6.60 -39.21 -0.26 0.21 16 5 C -0.21 -0.42 8.23 -39.43 -0.32 -0.74 16 6 C -0.08 -0.21 8.66 -39.61 -0.34 -0.55 16 7 C -0.11 -0.30 5.42 -104.60 -0.57 -0.87 16 8 C -0.07 -0.01 2.81 36.01 0.10 0.09 16 9 O -0.55 -0.20 12.74 -35.23 -0.45 -0.65 16 10 Si 0.68 -0.69 29.78 -169.99 -5.06 -5.76 16 11 C -0.05 -0.12 9.60 -39.60 -0.38 -0.50 16 12 C -0.14 -0.47 9.99 -39.43 -0.39 -0.86 16 13 C 0.52 1.23 7.14 -10.99 -0.08 1.15 16 14 O -0.51 -3.61 16.17 -14.31 -0.23 -3.84 16 15 N -0.72 0.65 4.19 -53.81 -0.23 0.43 16 16 C 0.15 -0.07 2.78 -67.93 -0.19 -0.26 16 17 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 18 C -0.13 0.33 5.61 -26.73 -0.15 0.18 16 19 C -0.11 0.36 5.03 -26.73 -0.13 0.22 16 20 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 21 H 0.08 -0.02 8.14 -51.93 -0.42 -0.45 16 22 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 23 O -0.57 -0.10 13.20 -35.23 -0.46 -0.56 16 24 C -0.11 0.02 4.94 -26.73 -0.13 -0.11 16 25 C -0.13 -0.04 5.60 -26.73 -0.15 -0.19 16 26 H 0.08 -0.10 6.91 -51.93 -0.36 -0.46 16 27 H 0.08 -0.31 7.92 -51.93 -0.41 -0.72 16 28 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.10 -0.13 6.31 -51.93 -0.33 -0.46 16 30 H 0.13 -0.07 5.43 -52.49 -0.29 -0.36 16 31 H 0.12 0.19 4.87 -52.49 -0.26 -0.07 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 33 H 0.38 -1.80 8.74 45.56 0.40 -1.40 16 34 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 35 H -0.25 -0.53 7.11 56.52 0.40 -0.12 16 36 H 0.14 0.16 8.06 -52.49 -0.42 -0.27 16 37 H 0.14 0.33 8.06 -52.49 -0.42 -0.09 16 38 H 0.40 -1.41 6.65 -40.82 -0.27 -1.68 16 39 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 41 H 0.06 -0.25 6.51 -51.93 -0.34 -0.59 16 42 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 43 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.38 -1.45 9.12 45.56 0.42 -1.03 16 46 H 0.07 0.11 7.82 -51.92 -0.41 -0.30 16 47 H 0.06 -0.02 7.60 -51.93 -0.39 -0.42 16 48 H 0.07 0.18 8.14 -51.93 -0.42 -0.25 16 49 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 385.50 15.07 5.81 5.81 Total: 0.00 -10.40 385.50 -10.60 -21.00 By element: Atomic # 1 Polarization: -6.34 SS G_CDS: -6.89 Total: -13.23 kcal Atomic # 6 Polarization: 1.05 SS G_CDS: -2.72 Total: -1.67 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.23 Total: 0.43 kcal Atomic # 8 Polarization: -5.07 SS G_CDS: -1.51 Total: -6.59 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.06 Total: -5.76 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.40 -10.60 -21.00 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_10157680.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.297 kcal (2) G-P(sol) polarization free energy of solvation -10.400 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.697 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.598 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.998 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds