Wall clock time and date at job start Mon Mar 8 2021 02:31:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.37655 * 125.67832 * 2 1 4 4 C 1.46682 * 126.23121 * 0.02562 * 3 2 1 5 5 O 1.21694 * 119.99976 * 5.13102 * 4 3 2 6 6 N 1.34773 * 119.99621 * 185.13714 * 4 3 2 7 7 C 1.46500 * 119.99996 * 174.63080 * 6 4 3 8 8 H 1.09003 * 109.47168 * 325.00399 * 7 6 4 9 9 C 1.53003 * 109.47225 * 84.99660 * 7 6 4 10 10 C 1.53001 * 109.47032 * 60.00097 * 9 7 6 11 11 C 1.53004 * 109.46831 * 60.00153 * 10 9 7 12 12 H 1.08999 * 109.47188 * 60.00051 * 11 10 9 13 13 C 1.53001 * 109.46831 * 179.97438 * 11 10 9 14 14 O 1.42904 * 109.47089 * 294.99953 * 13 11 10 15 15 C 1.53003 * 109.47188 * 299.99752 * 11 10 9 16 16 C 1.52995 * 109.47565 * 204.99983 * 7 6 4 17 17 C 1.37873 * 107.53250 * 180.28592 * 3 2 1 18 18 C 1.39835 * 107.08330 * 359.58538 * 17 3 2 19 19 C 1.35448 * 107.86589 * 0.41733 * 18 17 3 20 20 C 1.50701 * 125.56187 * 179.71960 * 19 18 17 21 21 O 1.42904 * 109.46895 * 210.02242 * 20 19 18 22 22 Si 1.86298 * 109.47434 * 330.02255 * 20 19 18 23 23 H 1.08996 * 109.47304 * 91.52036 * 1 2 3 24 24 H 1.09004 * 109.47175 * 211.52527 * 1 2 3 25 25 H 1.09006 * 109.47182 * 331.51992 * 1 2 3 26 26 H 0.97001 * 120.00514 * 354.63164 * 6 4 3 27 27 H 1.08999 * 109.47301 * 180.02562 * 9 7 6 28 28 H 1.09001 * 109.47314 * 300.00413 * 9 7 6 29 29 H 1.08999 * 109.47193 * 300.00207 * 10 9 7 30 30 H 1.09004 * 109.47030 * 179.97438 * 10 9 7 31 31 H 1.09004 * 109.47005 * 55.00173 * 13 11 10 32 32 H 1.09003 * 109.47094 * 174.99820 * 13 11 10 33 33 H 0.96698 * 113.99188 * 180.02562 * 14 13 11 34 34 H 1.08992 * 109.47209 * 179.97438 * 15 11 10 35 35 H 1.08998 * 109.47034 * 300.00710 * 15 11 10 36 36 H 1.08999 * 109.47332 * 179.97438 * 16 7 6 37 37 H 1.09004 * 109.47084 * 59.99589 * 16 7 6 38 38 H 1.08001 * 126.45426 * 179.73822 * 17 3 2 39 39 H 1.08001 * 126.06200 * 180.16113 * 18 17 3 40 40 H 1.08997 * 109.47283 * 90.02620 * 20 19 18 41 41 H 0.96708 * 113.99780 * 60.00555 * 21 20 19 42 42 H 1.48502 * 109.99738 * 58.68278 * 22 20 19 43 43 H 1.48496 * 110.00327 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8123 2.5125 0.0005 5 8 0.6256 2.7649 0.0953 6 7 2.7081 3.5140 -0.1040 7 6 2.2473 4.8996 -0.2220 8 1 1.3248 4.9276 -0.8019 9 6 1.9899 5.4721 1.1733 10 6 3.2848 5.4328 1.9875 11 6 4.3556 6.2683 1.2830 12 1 4.0127 7.2992 1.1952 13 6 5.6503 6.2296 2.0974 14 8 5.4396 6.8698 3.3575 15 6 4.6130 5.6958 -0.1124 16 6 3.3180 5.7351 -0.9265 17 6 3.5780 0.6888 -0.0066 18 6 3.5521 -0.7093 -0.0009 19 6 2.2554 -1.1009 -0.0005 20 6 1.7709 -2.5279 -0.0011 21 8 0.5128 -2.6034 -0.6747 22 14 3.0114 -3.6047 -0.8799 23 1 -0.3634 -0.0273 -1.0272 24 1 -0.3634 -0.8760 0.5374 25 1 -0.3634 0.9033 0.4901 26 1 3.6580 3.3174 -0.1012 27 1 1.6466 6.5028 1.0856 28 1 1.2271 4.8769 1.6753 29 1 3.6277 4.4019 2.0752 30 1 3.1015 5.8411 2.9814 31 1 5.9456 5.1932 2.2612 32 1 6.4380 6.7500 1.5526 33 1 6.2207 6.8826 3.9274 34 1 5.3755 6.2912 -0.6144 35 1 4.9558 4.6649 -0.0246 36 1 2.9750 6.7659 -1.0146 37 1 3.5014 5.3272 -1.9206 38 1 4.4583 1.3144 -0.0123 39 1 4.4132 -1.3611 -0.0012 40 1 1.6540 -2.8724 1.0263 41 1 0.5420 -2.3115 -1.5963 42 1 4.3322 -3.5101 -0.2078 43 1 2.5449 -5.0144 -0.8879 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_10803936.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:31:33 Heat of formation + Delta-G solvation = -77.907694 kcal Electronic energy + Delta-G solvation = -24773.906114 eV Core-core repulsion = 21206.915771 eV Total energy + Delta-G solvation = -3566.990343 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.57195 -41.01298 -39.23572 -37.80100 -37.44117 -34.93220 -33.69606 -32.15283 -31.82739 -30.76801 -27.44778 -27.07756 -26.06690 -23.74459 -23.38235 -22.21805 -21.60927 -20.47742 -20.11817 -18.92941 -18.29954 -18.14589 -16.95203 -16.87910 -16.63267 -16.19404 -15.92836 -15.75102 -15.44091 -15.18864 -14.87476 -14.79165 -14.73419 -14.43922 -14.30193 -13.93168 -13.69716 -13.49198 -13.23535 -13.19057 -13.07310 -12.94261 -12.49850 -12.24686 -12.20422 -12.01051 -11.60199 -11.35556 -11.15571 -10.96692 -10.87421 -10.68697 -10.04560 -9.72472 -9.06328 -5.05078 0.45805 1.10812 1.51923 1.69903 1.71562 1.97926 2.42590 2.45161 3.15145 3.20598 3.54861 3.59693 3.66593 3.77501 3.89268 3.99226 4.01259 4.19671 4.31573 4.32248 4.36799 4.39518 4.40849 4.44293 4.47819 4.52490 4.56889 4.62732 4.70314 4.83646 4.92654 4.98905 5.01070 5.05229 5.07579 5.16129 5.27632 5.39147 5.40959 5.54468 5.73124 6.00397 6.16431 6.35762 6.53320 6.65461 7.25004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.390 5.390 3 C -0.051 4.051 4 C 0.591 3.409 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.150 3.850 8 H 0.090 0.910 9 C -0.132 4.132 10 C -0.108 4.108 11 C -0.089 4.089 12 H 0.080 0.920 13 C 0.079 3.921 14 O -0.573 6.573 15 C -0.115 4.115 16 C -0.126 4.126 17 C -0.136 4.136 18 C -0.205 4.205 19 C 0.014 3.986 20 C -0.050 4.050 21 O -0.543 6.543 22 Si 0.723 3.277 23 H 0.076 0.924 24 H 0.093 0.907 25 H 0.101 0.899 26 H 0.401 0.599 27 H 0.073 0.927 28 H 0.070 0.930 29 H 0.059 0.941 30 H 0.070 0.930 31 H 0.044 0.956 32 H 0.045 0.955 33 H 0.380 0.620 34 H 0.071 0.929 35 H 0.062 0.938 36 H 0.083 0.917 37 H 0.074 0.926 38 H 0.144 0.856 39 H 0.146 0.854 40 H 0.119 0.881 41 H 0.380 0.620 42 H -0.252 1.252 43 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.633 0.215 -3.247 5.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.062 5.062 3 C -0.165 4.165 4 C 0.379 3.621 5 O -0.425 6.425 6 N -0.364 5.364 7 C 0.045 3.955 8 H 0.108 0.892 9 C -0.171 4.171 10 C -0.146 4.146 11 C -0.107 4.107 12 H 0.098 0.902 13 C 0.001 3.999 14 O -0.378 6.378 15 C -0.153 4.153 16 C -0.164 4.164 17 C -0.163 4.163 18 C -0.229 4.229 19 C -0.104 4.104 20 C -0.160 4.160 21 O -0.348 6.348 22 Si 0.622 3.378 23 H 0.094 0.906 24 H 0.111 0.889 25 H 0.119 0.881 26 H 0.237 0.763 27 H 0.092 0.908 28 H 0.089 0.911 29 H 0.078 0.922 30 H 0.089 0.911 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.227 0.773 34 H 0.090 0.910 35 H 0.080 0.920 36 H 0.101 0.899 37 H 0.092 0.908 38 H 0.162 0.838 39 H 0.164 0.836 40 H 0.136 0.864 41 H 0.228 0.772 42 H -0.177 1.177 43 H -0.178 1.178 Dipole moment (debyes) X Y Z Total from point charges 3.108 -0.388 -2.807 4.206 hybrid contribution 0.864 0.165 0.845 1.220 sum 3.972 -0.223 -1.962 4.436 Atomic orbital electron populations 1.22400 0.75438 1.05691 1.04123 1.43752 1.07019 1.03996 1.51435 1.20069 0.90468 0.87573 1.18381 1.16974 0.85612 0.83487 0.76049 1.90792 1.16384 1.84798 1.50513 1.45750 1.09693 1.06058 1.74873 1.20982 0.98053 0.79597 0.96825 0.89236 1.21946 0.98148 1.01545 0.95425 1.21479 0.94217 0.99646 0.99234 1.21188 0.94733 1.00997 0.93818 0.90177 1.22235 0.96983 0.96004 0.84696 1.86481 1.40915 1.81272 1.29156 1.21525 0.97750 1.01168 0.94816 1.21820 0.94728 1.00957 0.98892 1.21252 0.94367 0.95135 1.05512 1.20629 0.95068 0.95403 1.11790 1.21107 0.90940 0.89215 1.09110 1.24970 0.94133 0.94579 1.02345 1.86498 1.29991 1.89071 1.29273 0.94019 0.76375 0.77697 0.89702 0.90561 0.88881 0.88054 0.76295 0.90826 0.91137 0.92213 0.91113 0.93724 0.93647 0.77302 0.91048 0.91952 0.89855 0.90759 0.83833 0.83603 0.86405 0.77220 1.17651 1.17769 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.08 9.41 59.85 0.56 0.64 16 2 N -0.39 -0.79 3.16 -115.62 -0.37 -1.16 16 3 C -0.05 -0.12 6.89 -81.98 -0.56 -0.68 16 4 C 0.59 1.68 7.73 -12.85 -0.10 1.58 16 5 O -0.55 -3.17 14.28 5.19 0.07 -3.10 16 6 N -0.71 0.06 4.22 -55.11 -0.23 -0.17 16 7 C 0.15 -0.04 2.74 -67.93 -0.19 -0.22 16 8 H 0.09 0.11 7.66 -51.93 -0.40 -0.29 16 9 C -0.13 -0.08 5.60 -26.73 -0.15 -0.22 16 10 C -0.11 -0.03 4.94 -26.73 -0.13 -0.16 16 11 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 12 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 13 C 0.08 -0.09 6.43 37.16 0.24 0.15 16 14 O -0.57 -0.29 13.19 -35.23 -0.46 -0.76 16 15 C -0.11 0.31 5.03 -26.73 -0.13 0.18 16 16 C -0.13 0.29 5.61 -26.73 -0.15 0.14 16 17 C -0.14 -0.07 10.36 -39.12 -0.41 -0.48 16 18 C -0.20 -0.11 9.37 -39.98 -0.37 -0.49 16 19 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 20 C -0.05 0.03 2.89 36.01 0.10 0.13 16 21 O -0.54 0.37 10.41 -35.23 -0.37 0.00 16 22 Si 0.72 -1.31 31.29 -169.99 -5.32 -6.63 16 23 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 24 H 0.09 0.07 6.90 -51.93 -0.36 -0.29 16 25 H 0.10 0.30 6.14 -51.93 -0.32 -0.02 16 26 H 0.40 -0.83 5.77 -40.82 -0.24 -1.07 16 27 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.07 0.20 8.08 -51.93 -0.42 -0.22 16 29 H 0.06 0.03 7.60 -51.93 -0.39 -0.36 16 30 H 0.07 0.14 7.82 -51.93 -0.41 -0.27 16 31 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.38 -1.32 9.12 45.56 0.42 -0.90 16 34 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 35 H 0.06 -0.21 6.50 -51.93 -0.34 -0.55 16 36 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 37 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.14 -0.31 7.45 -52.49 -0.39 -0.70 16 39 H 0.15 -0.12 6.62 -52.49 -0.35 -0.46 16 40 H 0.12 -0.02 7.96 -51.93 -0.41 -0.44 16 41 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 42 H -0.25 -0.03 6.76 56.52 0.38 0.35 16 43 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 LS Contribution 337.44 15.07 5.09 5.09 Total: 0.00 -7.77 337.44 -9.41 -17.18 By element: Atomic # 1 Polarization: -4.60 SS G_CDS: -5.81 Total: -10.41 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -2.01 Total: -0.05 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.60 Total: -1.33 kcal Atomic # 8 Polarization: -3.10 SS G_CDS: -0.76 Total: -3.85 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.32 Total: -6.63 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -7.77 -9.41 -17.18 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_10803936.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.726 kcal (2) G-P(sol) polarization free energy of solvation -7.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.498 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.181 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.908 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds