Wall clock time and date at job start Mon Mar 8 2021 02:32:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86301 * 109.47369 * 2 1 4 4 C 1.50707 * 109.47120 * 119.99691 * 2 1 3 5 5 C 1.38315 * 119.92438 * 244.97663 * 4 2 1 6 6 C 1.38459 * 120.28471 * 180.02562 * 5 4 2 7 7 Br 1.89103 * 119.93848 * 180.02562 * 6 5 4 8 8 C 1.38030 * 120.12239 * 359.71846 * 6 5 4 9 9 C 1.39580 * 119.84428 * 0.57834 * 8 6 5 10 10 C 1.47851 * 120.14331 * 179.69680 * 9 8 6 11 11 O 1.21549 * 119.99933 * 179.72604 * 10 9 8 12 12 N 1.34768 * 119.99824 * 359.72442 * 10 9 8 13 13 C 1.46500 * 120.00085 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47129 * 325.00582 * 13 12 10 15 15 C 1.53002 * 109.47089 * 85.00503 * 13 12 10 16 16 C 1.52996 * 109.46972 * 59.99956 * 15 13 12 17 17 C 1.52997 * 109.47131 * 60.00459 * 16 15 13 18 18 H 1.08993 * 109.47194 * 60.00154 * 17 16 15 19 19 C 1.53006 * 109.46943 * 179.97438 * 17 16 15 20 20 O 1.42897 * 109.47254 * 294.99971 * 19 17 16 21 21 C 1.52999 * 109.46991 * 299.99311 * 17 16 15 22 22 C 1.52997 * 109.47473 * 205.00325 * 13 12 10 23 23 C 1.37991 * 119.91793 * 64.99809 * 4 2 1 24 24 H 0.96705 * 114.00336 * 300.00365 * 1 2 3 25 25 H 1.09000 * 109.47000 * 239.99706 * 2 1 3 26 26 H 1.48503 * 109.99885 * 299.99852 * 3 2 1 27 27 H 1.48502 * 109.99991 * 61.31643 * 3 2 1 28 28 H 1.08005 * 119.85653 * 359.97438 * 5 4 2 29 29 H 1.08005 * 120.07988 * 180.28119 * 8 6 5 30 30 H 0.97006 * 120.00285 * 0.02562 * 12 10 9 31 31 H 1.08996 * 109.47407 * 180.02562 * 15 13 12 32 32 H 1.09000 * 109.46986 * 300.00214 * 15 13 12 33 33 H 1.09001 * 109.46993 * 180.02562 * 16 15 13 34 34 H 1.09000 * 109.47380 * 299.99696 * 16 15 13 35 35 H 1.09001 * 109.47164 * 55.00166 * 19 17 16 36 36 H 1.08998 * 109.46741 * 174.99515 * 19 17 16 37 37 H 0.96702 * 113.99667 * 179.97438 * 20 19 17 38 38 H 1.08993 * 109.47839 * 300.00447 * 21 17 16 39 39 H 1.09000 * 109.47160 * 180.02562 * 21 17 16 40 40 H 1.09001 * 109.47502 * 180.02562 * 22 13 12 41 41 H 1.09001 * 109.47289 * 60.00327 * 22 13 12 42 42 H 1.07999 * 120.06275 * 0.02562 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2306 5 6 2.6394 -0.0104 2.1906 6 6 3.1048 -0.6557 3.3238 7 35 4.0712 0.3111 4.6305 8 6 2.8593 -2.0019 3.5044 9 6 2.1507 -2.7148 2.5360 10 6 1.8898 -4.1585 2.7195 11 8 1.2681 -4.7757 1.8769 12 7 2.3412 -4.7901 3.8211 13 6 2.0822 -6.2204 4.0033 14 1 1.1030 -6.4675 3.5933 15 6 3.1583 -7.0301 3.2770 16 6 4.5328 -6.6833 3.8525 17 6 4.5609 -7.0208 5.3445 18 1 4.3683 -8.0850 5.4800 19 6 5.9357 -6.6745 5.9199 20 8 6.9267 -7.5139 5.3238 21 6 3.4850 -6.2111 6.0709 22 6 2.1103 -6.5579 5.4953 23 6 1.6841 -2.0578 1.3965 24 1 -0.3934 0.4418 0.7650 25 1 1.7923 -0.5139 -0.8900 26 1 1.5615 2.4679 -1.2085 27 1 1.5879 2.4586 1.2242 28 1 2.8307 1.0440 2.0554 29 1 3.2188 -2.5036 4.3908 30 1 2.8370 -4.2974 4.4938 31 1 2.9654 -8.0943 3.4122 32 1 3.1383 -6.7897 2.2140 33 1 5.2994 -7.2598 3.3348 34 1 4.7255 -5.6191 3.7169 35 1 6.1669 -5.6310 5.7059 36 1 5.9280 -6.8311 6.9986 37 1 7.8249 -7.3491 5.6421 38 1 3.6776 -5.1469 5.9354 39 1 3.5053 -6.4511 7.1339 40 1 1.9181 -7.6222 5.6309 41 1 1.3437 -5.9811 6.0128 42 1 1.1318 -2.6030 0.6455 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:12 Heat of formation + Delta-G solvation = -95.974057 kcal Electronic energy + Delta-G solvation = -25759.849251 eV Core-core repulsion = 21944.994879 eV Total energy + Delta-G solvation = -3814.854373 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.061 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.77252 -40.62901 -39.31360 -37.84352 -37.50030 -34.95078 -33.67214 -33.29206 -31.89801 -31.31503 -30.52107 -27.13294 -26.65584 -25.22560 -23.76949 -22.87771 -22.27529 -21.78429 -20.24174 -19.31836 -18.33310 -18.01153 -17.69638 -17.25161 -16.66308 -16.57702 -16.36054 -16.02747 -15.84715 -15.67703 -15.08639 -15.03015 -14.98608 -14.77732 -14.30371 -14.18165 -13.96161 -13.51836 -13.33029 -13.27570 -13.11447 -13.02495 -12.54822 -12.30978 -12.25761 -12.00567 -11.83462 -11.65298 -11.51247 -11.40611 -11.19380 -11.07734 -10.91200 -10.72552 -10.37589 -10.08546 -9.95574 -5.08284 -0.52958 -0.21606 0.35736 1.11675 1.46478 1.58439 1.84879 2.01383 2.48969 3.11427 3.15988 3.27157 3.36255 3.56159 3.62951 3.72946 3.78142 3.84213 3.92383 3.94616 4.13504 4.16933 4.22864 4.29318 4.35191 4.36485 4.42864 4.47425 4.52484 4.58540 4.65492 4.69902 4.88537 4.89337 4.94403 4.98852 5.02951 5.07016 5.21041 5.32801 5.35549 5.36100 5.48031 6.27231 6.37149 6.62890 7.11022 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.524 6.524 2 C -0.074 4.074 3 Si 0.681 3.319 4 C -0.117 4.117 5 C -0.066 4.066 6 C -0.094 4.094 7 Br -0.034 7.034 8 C -0.054 4.054 9 C -0.127 4.127 10 C 0.561 3.439 11 O -0.526 6.526 12 N -0.717 5.717 13 C 0.145 3.855 14 H 0.092 0.908 15 C -0.132 4.132 16 C -0.108 4.108 17 C -0.089 4.089 18 H 0.081 0.919 19 C 0.079 3.921 20 O -0.572 6.572 21 C -0.115 4.115 22 C -0.127 4.127 23 C -0.017 4.017 24 H 0.377 0.623 25 H 0.125 0.875 26 H -0.250 1.250 27 H -0.255 1.255 28 H 0.142 0.858 29 H 0.136 0.864 30 H 0.398 0.602 31 H 0.075 0.925 32 H 0.070 0.930 33 H 0.072 0.928 34 H 0.058 0.942 35 H 0.044 0.956 36 H 0.045 0.955 37 H 0.380 0.620 38 H 0.060 0.940 39 H 0.071 0.929 40 H 0.084 0.916 41 H 0.073 0.927 42 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.635 1.557 4.112 5.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.330 6.330 2 C -0.184 4.184 3 Si 0.582 3.418 4 C -0.118 4.118 5 C -0.086 4.086 6 C -0.174 4.174 7 Br 0.052 6.948 8 C -0.075 4.075 9 C -0.131 4.131 10 C 0.347 3.653 11 O -0.403 6.403 12 N -0.370 5.370 13 C 0.041 3.959 14 H 0.110 0.890 15 C -0.171 4.171 16 C -0.146 4.146 17 C -0.108 4.108 18 H 0.099 0.901 19 C 0.001 3.999 20 O -0.378 6.378 21 C -0.153 4.153 22 C -0.165 4.165 23 C -0.036 4.036 24 H 0.225 0.775 25 H 0.143 0.857 26 H -0.175 1.175 27 H -0.180 1.180 28 H 0.160 0.840 29 H 0.154 0.846 30 H 0.234 0.766 31 H 0.093 0.907 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.077 0.923 35 H 0.063 0.937 36 H 0.064 0.936 37 H 0.227 0.773 38 H 0.078 0.922 39 H 0.090 0.910 40 H 0.102 0.898 41 H 0.092 0.908 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.892 1.748 3.146 4.617 hybrid contribution -0.442 0.124 1.050 1.146 sum 2.450 1.872 4.196 5.207 Atomic orbital electron populations 1.86651 1.17161 1.79889 1.49320 1.25059 0.84341 1.11093 0.97876 0.95033 0.91581 0.74281 0.80915 1.20313 0.99818 0.94513 0.97177 1.21261 0.95245 1.00246 0.91819 1.21632 1.04076 0.95050 0.96597 1.96841 1.72425 1.73622 1.51903 1.21266 0.95596 0.92340 0.98273 1.20001 1.02544 0.93915 0.96625 1.18091 0.79029 0.86228 0.81907 1.90821 1.39985 1.67188 1.42316 1.46043 1.57545 1.10728 1.22732 1.21027 0.99861 0.79246 0.95738 0.88966 1.21945 0.94556 1.00123 1.00430 1.21480 0.97085 1.01418 0.94597 1.21186 0.92647 1.01229 0.95697 0.90096 1.22227 0.88551 0.93223 0.95907 1.86479 1.19678 1.62538 1.69092 1.21528 0.94111 0.99600 1.00042 1.21826 0.97368 1.03148 0.94123 1.21314 0.93559 0.93091 0.95655 0.77496 0.85679 1.17492 1.18024 0.84042 0.84581 0.76568 0.90668 0.91124 0.90973 0.92298 0.93743 0.93648 0.77264 0.92159 0.90987 0.89756 0.90804 0.83396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.33 12.83 -35.23 -0.45 -0.78 16 2 C -0.07 0.07 2.80 36.01 0.10 0.17 16 3 Si 0.68 -1.16 29.87 -169.99 -5.08 -6.24 16 4 C -0.12 0.07 5.35 -104.68 -0.56 -0.49 16 5 C -0.07 0.07 8.40 -39.47 -0.33 -0.26 16 6 C -0.09 0.08 6.22 -39.58 -0.25 -0.17 16 7 Br -0.03 0.03 33.69 -68.01 -2.29 -2.26 16 8 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 9 C -0.13 -0.06 5.87 -104.97 -0.62 -0.68 16 10 C 0.56 1.05 7.74 -12.33 -0.10 0.96 16 11 O -0.53 -2.94 16.01 5.32 0.09 -2.85 16 12 N -0.72 0.56 4.18 -54.75 -0.23 0.33 16 13 C 0.15 -0.09 2.78 -67.93 -0.19 -0.28 16 14 H 0.09 0.09 7.58 -51.93 -0.39 -0.30 16 15 C -0.13 0.00 5.60 -26.73 -0.15 -0.15 16 16 C -0.11 0.04 4.94 -26.73 -0.13 -0.09 16 17 C -0.09 0.13 2.43 -90.62 -0.22 -0.09 16 18 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 19 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 20 O -0.57 -0.04 13.19 -35.23 -0.46 -0.50 16 21 C -0.12 0.35 5.03 -26.73 -0.13 0.21 16 22 C -0.13 0.32 5.61 -26.73 -0.15 0.17 16 23 C -0.02 -0.01 9.23 -39.18 -0.36 -0.37 16 24 H 0.38 -0.86 8.70 45.56 0.40 -0.46 16 25 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 26 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 27 H -0.26 0.01 7.01 56.52 0.40 0.41 16 28 H 0.14 -0.33 4.82 -52.48 -0.25 -0.58 16 29 H 0.14 -0.45 6.41 -52.48 -0.34 -0.79 16 30 H 0.40 -1.15 4.90 -40.82 -0.20 -1.35 16 31 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 33 H 0.07 0.09 7.82 -51.93 -0.41 -0.31 16 34 H 0.06 -0.02 7.60 -51.93 -0.39 -0.42 16 35 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.05 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.38 -1.47 9.12 45.56 0.42 -1.05 16 38 H 0.06 -0.23 6.50 -51.93 -0.34 -0.57 16 39 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 40 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 41 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 42 H 0.15 0.26 7.65 -52.49 -0.40 -0.14 16 LS Contribution 355.80 15.07 5.36 5.36 Total: 0.00 -7.41 355.80 -11.19 -18.59 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -4.91 Total: -10.39 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -3.21 Total: -1.25 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.23 Total: 0.33 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.83 Total: -4.14 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.08 Total: -6.24 kcal Atomic # 35 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.36 Total: 5.36 kcal Total: -7.41 -11.19 -18.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.380 kcal (2) G-P(sol) polarization free energy of solvation -7.406 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.188 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.594 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.974 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds