Wall clock time and date at job start Mon Mar 8 2021 02:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46993 * 2 1 4 4 C 1.50695 * 109.47290 * 120.00380 * 2 1 3 5 5 C 1.38614 * 119.84232 * 195.02419 * 4 2 1 6 6 F 1.35094 * 119.91764 * 359.97438 * 5 4 2 7 7 C 1.38112 * 120.16595 * 180.02562 * 5 4 2 8 8 C 1.39619 * 119.85053 * 359.71846 * 7 5 4 9 9 C 1.47699 * 120.15525 * 180.25252 * 8 7 5 10 10 O 1.21577 * 119.99625 * 180.25080 * 9 8 7 11 11 N 1.34769 * 120.00053 * 0.25887 * 9 8 7 12 12 C 1.46502 * 120.00130 * 179.97438 * 11 9 8 13 13 H 1.09000 * 109.46888 * 35.00245 * 12 11 9 14 14 C 1.52999 * 109.47141 * 154.99546 * 12 11 9 15 15 C 1.52997 * 109.46788 * 60.00360 * 14 12 11 16 16 C 1.53001 * 109.47358 * 60.00068 * 15 14 12 17 17 H 1.09003 * 109.47288 * 59.99622 * 16 15 14 18 18 C 1.52997 * 109.47358 * 179.97438 * 16 15 14 19 19 O 1.42904 * 109.47278 * 184.99794 * 18 16 15 20 20 C 1.52995 * 109.46797 * 299.99862 * 16 15 14 21 21 C 1.53001 * 109.47671 * 60.00091 * 20 16 15 22 22 C 1.39850 * 119.68892 * 0.50715 * 8 7 5 23 23 F 1.35104 * 120.08262 * 179.76863 * 22 8 7 24 24 C 1.38233 * 119.84501 * 14.99740 * 4 2 1 25 25 H 0.96701 * 114.00328 * 59.99896 * 1 2 3 26 26 H 1.09000 * 109.47041 * 240.00018 * 2 1 3 27 27 H 1.48507 * 109.99765 * 60.00244 * 3 2 1 28 28 H 1.48503 * 109.99770 * 181.31729 * 3 2 1 29 29 H 1.07998 * 120.07987 * 179.97438 * 7 5 4 30 30 H 0.96996 * 119.99878 * 359.97438 * 11 9 8 31 31 H 1.09003 * 109.46952 * 180.02562 * 14 12 11 32 32 H 1.08996 * 109.47698 * 300.00372 * 14 12 11 33 33 H 1.09008 * 109.47193 * 179.97438 * 15 14 12 34 34 H 1.08994 * 109.47450 * 299.99493 * 15 14 12 35 35 H 1.09007 * 109.47225 * 304.99725 * 18 16 15 36 36 H 1.09002 * 109.47512 * 64.99702 * 18 16 15 37 37 H 0.96704 * 113.99865 * 179.97438 * 19 18 16 38 38 H 1.09005 * 109.47430 * 180.02562 * 20 16 15 39 39 H 1.08997 * 109.47640 * 299.99634 * 20 16 15 40 40 H 1.08995 * 109.47521 * 179.97438 * 21 20 16 41 41 H 1.08997 * 109.46961 * 59.99128 * 21 20 16 42 42 H 1.07998 * 119.92365 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 3.2561 -0.5722 1.6141 6 9 4.0922 0.1981 0.8842 7 6 3.7238 -1.2207 2.7403 8 6 2.8573 -2.0125 3.4963 9 6 3.3489 -2.7046 4.7050 10 8 2.5931 -3.3971 5.3587 11 7 4.6352 -2.5684 5.0833 12 6 5.1227 -3.2544 6.2825 13 1 4.6233 -4.2186 6.3777 14 6 6.6328 -3.4715 6.1675 15 6 7.3338 -2.1181 6.0338 16 6 7.0338 -1.2642 7.2674 17 1 7.3964 -1.7747 8.1596 18 6 7.7352 0.0889 7.1339 19 8 7.5517 0.8411 8.3350 20 6 5.5236 -1.0472 7.3823 21 6 4.8225 -2.4006 7.5161 22 6 1.5231 -2.1516 3.1009 23 9 0.6790 -2.9196 3.8239 24 6 1.0688 -1.4965 1.9712 25 1 -0.3934 0.4417 -0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 1.2086 28 1 3.5346 1.7703 -0.0321 29 1 4.7563 -1.1123 3.0378 30 1 5.2383 -2.0161 4.5616 31 1 6.9954 -3.9823 7.0595 32 1 6.8467 -4.0798 5.2887 33 1 8.4098 -2.2726 5.9523 34 1 6.9712 -1.6077 5.1416 35 1 8.8002 -0.0691 6.9634 36 1 7.3101 0.6373 6.2933 37 1 7.9713 1.7123 8.3215 38 1 5.3098 -0.4385 8.2609 39 1 5.1609 -0.5368 6.4902 40 1 3.7467 -2.2459 7.5984 41 1 5.1853 -2.9110 8.4082 42 1 0.0379 -1.5999 1.6665 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:22 Heat of formation + Delta-G solvation = -174.810933 kcal Electronic energy + Delta-G solvation = -28906.526306 eV Core-core repulsion = 24489.163361 eV Total energy + Delta-G solvation = -4417.362945 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.132 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.56015 -49.92185 -41.61326 -40.34269 -39.31218 -37.78548 -37.49125 -34.95333 -33.43494 -31.91516 -31.54288 -31.33421 -28.00386 -26.43958 -24.32663 -23.95841 -23.74040 -22.32643 -22.00466 -20.29574 -19.83785 -19.05672 -18.44852 -18.29541 -18.04609 -17.59990 -17.22282 -16.81796 -16.74752 -16.45606 -16.05219 -15.96611 -15.85930 -15.75161 -15.61765 -15.34378 -14.99747 -14.91506 -14.56625 -14.07318 -13.98202 -13.64380 -13.56017 -13.29369 -13.14389 -13.05871 -13.03312 -12.61793 -12.51871 -12.27389 -11.71805 -11.66763 -11.42461 -11.21272 -11.08831 -11.01544 -10.92901 -10.23417 -10.12540 -9.71977 -5.07118 -0.77626 -0.33656 1.04877 1.53434 1.58635 1.89198 1.91529 2.32928 2.61475 2.80663 2.88728 3.09248 3.14326 3.42344 3.55172 3.58800 3.61724 3.79437 3.81673 3.92963 4.05687 4.12750 4.23516 4.27125 4.32004 4.33965 4.34790 4.40843 4.50396 4.55491 4.60305 4.64136 4.68076 4.79878 4.87036 4.93603 5.00168 5.01403 5.20000 5.32259 5.34408 5.38444 5.45401 6.31992 6.35473 6.60882 7.07310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.076 4.076 3 Si 0.684 3.316 4 C -0.055 4.055 5 C 0.064 3.936 6 F -0.115 7.115 7 C -0.085 4.085 8 C -0.152 4.152 9 C 0.561 3.439 10 O -0.514 6.514 11 N -0.716 5.716 12 C 0.146 3.854 13 H 0.094 0.906 14 C -0.126 4.126 15 C -0.115 4.115 16 C -0.089 4.089 17 H 0.081 0.919 18 C 0.079 3.921 19 O -0.572 6.572 20 C -0.109 4.109 21 C -0.132 4.132 22 C 0.160 3.840 23 F -0.104 7.104 24 C -0.111 4.111 25 H 0.392 0.608 26 H 0.092 0.908 27 H -0.257 1.257 28 H -0.226 1.226 29 H 0.150 0.850 30 H 0.397 0.603 31 H 0.085 0.915 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.059 0.941 35 H 0.046 0.954 36 H 0.043 0.957 37 H 0.380 0.620 38 H 0.072 0.928 39 H 0.057 0.943 40 H 0.070 0.930 41 H 0.076 0.924 42 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.767 3.459 -5.700 7.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.185 4.185 3 Si 0.582 3.418 4 C -0.056 4.056 5 C 0.045 3.955 6 F -0.093 7.093 7 C -0.105 4.105 8 C -0.156 4.156 9 C 0.347 3.653 10 O -0.389 6.389 11 N -0.370 5.370 12 C 0.042 3.958 13 H 0.112 0.888 14 C -0.164 4.164 15 C -0.153 4.153 16 C -0.108 4.108 17 H 0.100 0.900 18 C 0.001 3.999 19 O -0.378 6.378 20 C -0.146 4.146 21 C -0.171 4.171 22 C 0.139 3.861 23 F -0.082 7.082 24 C -0.130 4.130 25 H 0.241 0.759 26 H 0.110 0.890 27 H -0.181 1.181 28 H -0.151 1.151 29 H 0.168 0.832 30 H 0.234 0.766 31 H 0.103 0.897 32 H 0.092 0.908 33 H 0.091 0.909 34 H 0.078 0.922 35 H 0.064 0.936 36 H 0.062 0.938 37 H 0.227 0.773 38 H 0.091 0.909 39 H 0.076 0.924 40 H 0.089 0.911 41 H 0.094 0.906 42 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges 3.469 2.671 -4.045 5.961 hybrid contribution 0.680 0.218 -0.305 0.777 sum 4.150 2.889 -4.350 6.670 Atomic orbital electron populations 1.86372 1.16457 1.82051 1.50311 1.24657 0.86532 1.10892 0.96387 0.95791 0.81077 0.75476 0.89473 1.19456 0.91489 0.97096 0.97597 1.17196 0.87852 0.97217 0.93261 1.91508 1.70644 1.71447 1.75721 1.21025 1.00522 0.95786 0.93133 1.19900 0.93437 1.03394 0.98845 1.17805 0.82537 0.81167 0.83831 1.90887 1.55192 1.38579 1.54265 1.45998 1.10518 1.51519 1.28971 1.21040 0.94364 0.96527 0.83881 0.88845 1.21823 0.93397 0.97473 1.03727 1.21530 1.00979 0.95476 0.97298 1.21189 0.96108 0.94355 0.99113 0.90020 1.22229 0.98586 0.92350 0.86743 1.86483 1.79542 1.33172 1.38573 1.21484 0.93623 0.97048 1.02467 1.21949 1.01463 0.96222 0.97460 1.17679 0.86660 0.91299 0.90441 1.91652 1.69147 1.71611 1.75796 1.20871 1.02408 0.96441 0.93232 0.75949 0.89000 1.18074 1.15075 0.83233 0.76632 0.89680 0.90754 0.90941 0.92237 0.93599 0.93843 0.77263 0.90947 0.92406 0.91099 0.90573 0.81648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.98 11.47 -35.23 -0.40 0.58 16 2 C -0.08 0.11 2.95 36.00 0.11 0.22 16 3 Si 0.68 -1.18 30.72 -169.99 -5.22 -6.41 16 4 C -0.05 -0.05 5.16 -104.49 -0.54 -0.59 16 5 C 0.06 0.05 6.65 -39.49 -0.26 -0.22 16 6 F -0.11 -0.11 12.84 2.25 0.03 -0.08 16 7 C -0.09 0.01 9.52 -39.11 -0.37 -0.36 16 8 C -0.15 -0.32 5.88 -104.91 -0.62 -0.93 16 9 C 0.56 1.77 7.73 -12.40 -0.10 1.67 16 10 O -0.51 -3.61 15.00 5.30 0.08 -3.53 16 11 N -0.72 0.03 4.18 -54.80 -0.23 -0.19 16 12 C 0.15 -0.01 2.78 -67.93 -0.19 -0.20 16 13 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 14 C -0.13 0.28 5.61 -26.73 -0.15 0.13 16 15 C -0.12 0.31 5.03 -26.73 -0.13 0.18 16 16 C -0.09 0.09 2.43 -90.62 -0.22 -0.13 16 17 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 18 C 0.08 -0.09 6.43 37.16 0.24 0.15 16 19 O -0.57 -0.26 13.20 -35.23 -0.46 -0.73 16 20 C -0.11 -0.02 4.94 -26.73 -0.13 -0.15 16 21 C -0.13 -0.08 5.60 -26.73 -0.15 -0.23 16 22 C 0.16 0.51 7.28 -38.97 -0.28 0.23 16 23 F -0.10 -0.58 15.55 2.25 0.04 -0.54 16 24 C -0.11 -0.19 9.33 -39.57 -0.37 -0.56 16 25 H 0.39 -2.61 8.74 45.56 0.40 -2.22 16 26 H 0.09 -0.30 7.96 -51.93 -0.41 -0.71 16 27 H -0.26 -0.57 7.11 56.52 0.40 -0.16 16 28 H -0.23 -0.10 5.39 56.52 0.30 0.20 16 29 H 0.15 -0.47 6.40 -52.49 -0.34 -0.81 16 30 H 0.40 -0.96 4.90 -40.82 -0.20 -1.16 16 31 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 -0.19 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 -0.23 8.14 -51.92 -0.42 -0.65 16 34 H 0.06 -0.21 6.51 -51.93 -0.34 -0.55 16 35 H 0.05 -0.09 8.14 -51.93 -0.42 -0.52 16 36 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.38 -1.33 9.12 45.56 0.42 -0.91 16 38 H 0.07 0.13 7.82 -51.93 -0.41 -0.27 16 39 H 0.06 0.01 7.60 -51.93 -0.39 -0.38 16 40 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 41 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.17 0.17 7.12 -52.49 -0.37 -0.20 16 LS Contribution 341.66 15.07 5.15 5.15 Total: 0.00 -9.06 341.66 -8.92 -17.98 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -4.72 Total: -11.43 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -3.17 Total: -0.79 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.23 Total: -0.19 kcal Atomic # 8 Polarization: -2.89 SS G_CDS: -0.79 Total: -3.68 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.06 Total: -0.63 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.22 Total: -6.41 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -9.06 -8.92 -17.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.831 kcal (2) G-P(sol) polarization free energy of solvation -9.063 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.916 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.980 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds