Wall clock time and date at job start Mon Mar 8 2021 02:32:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35657 * 116.99980 * 2 1 4 4 C 1.40132 * 120.14824 * 180.02562 * 3 2 1 5 5 C 1.47532 * 120.19511 * 0.02562 * 4 3 2 6 6 O 1.21587 * 120.00149 * 359.71706 * 5 4 3 7 7 N 1.34774 * 120.00080 * 179.72336 * 5 4 3 8 8 C 1.46502 * 120.00163 * 179.97438 * 7 5 4 9 9 H 1.08992 * 109.47338 * 325.00305 * 8 7 5 10 10 C 1.53006 * 109.46875 * 85.00141 * 8 7 5 11 11 C 1.52997 * 109.47380 * 60.00145 * 10 8 7 12 12 C 1.53001 * 109.47242 * 59.99720 * 11 10 8 13 13 H 1.09008 * 109.46731 * 60.00294 * 12 11 10 14 14 C 1.52997 * 109.47242 * 179.97438 * 12 11 10 15 15 O 1.42898 * 109.47319 * 295.00540 * 14 12 11 16 16 C 1.52994 * 109.47368 * 300.00569 * 12 11 10 17 17 C 1.52997 * 109.47404 * 59.99530 * 16 12 11 18 18 C 1.39709 * 119.61487 * 179.72366 * 4 3 2 19 19 C 1.37786 * 119.90921 * 0.25385 * 18 4 3 20 20 C 1.50702 * 119.85297 * 180.02562 * 19 18 4 21 21 O 1.42900 * 109.47261 * 64.99957 * 20 19 18 22 22 Si 1.86302 * 109.47130 * 184.99827 * 20 19 18 23 23 C 1.38552 * 120.30071 * 359.97438 * 19 18 4 24 24 C 1.38056 * 120.38608 * 0.02562 * 23 19 18 25 25 H 1.09006 * 109.47437 * 299.99972 * 1 2 3 26 26 H 1.09002 * 109.47482 * 60.00443 * 1 2 3 27 27 H 1.09000 * 109.47375 * 179.97438 * 1 2 3 28 28 H 0.97006 * 120.00602 * 359.97438 * 7 5 4 29 29 H 1.08998 * 109.47136 * 180.02562 * 10 8 7 30 30 H 1.09000 * 109.46811 * 299.99928 * 10 8 7 31 31 H 1.09008 * 109.47017 * 300.00189 * 11 10 8 32 32 H 1.08998 * 109.47192 * 180.02562 * 11 10 8 33 33 H 1.09002 * 109.47153 * 175.00232 * 14 12 11 34 34 H 1.09001 * 109.46832 * 55.00423 * 14 12 11 35 35 H 0.96701 * 113.99881 * 180.02562 * 15 14 12 36 36 H 1.09000 * 109.47476 * 179.97438 * 16 12 11 37 37 H 1.09008 * 109.46970 * 299.99579 * 16 12 11 38 38 H 1.08995 * 109.47630 * 59.99990 * 17 16 12 39 39 H 1.09002 * 109.47754 * 180.02562 * 17 16 12 40 40 H 1.08003 * 120.04737 * 180.27854 * 18 4 3 41 41 H 1.09002 * 109.46873 * 304.99492 * 20 19 18 42 42 H 0.96701 * 114.00432 * 59.99590 * 21 20 19 43 43 H 1.48497 * 109.99902 * 179.97438 * 22 20 19 44 44 H 1.48498 * 110.00038 * 301.31547 * 22 20 19 45 45 H 1.08001 * 119.80543 * 180.02562 * 23 19 18 46 46 H 1.08001 * 119.95477 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2857 -0.0005 5 6 4.2549 0.0532 -0.0017 6 8 3.7095 -1.0334 0.0030 7 7 5.6004 0.1318 -0.0078 8 6 6.4057 -1.0921 -0.0084 9 1 5.9048 -1.8568 0.5850 10 6 6.5746 -1.5907 -1.4450 11 6 7.2777 -0.5172 -2.2782 12 6 8.6529 -0.2231 -1.6753 13 1 9.2520 -1.1338 -1.6758 14 6 9.3562 0.8499 -2.5088 15 8 9.6184 0.3404 -3.8179 16 6 8.4840 0.2754 -0.2388 17 6 7.7809 -0.7981 0.5943 18 6 4.0667 2.5363 -0.0064 19 6 3.3037 3.6837 -0.0063 20 6 3.9766 5.0321 -0.0132 21 8 4.6934 5.2005 -1.2379 22 14 2.6890 6.3696 0.1417 23 6 1.9205 3.6034 -0.0009 24 6 1.2924 2.3740 0.0049 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 6.0357 0.9987 -0.0119 29 1 7.1733 -2.5015 -1.4455 30 1 5.5949 -1.8001 -1.8745 31 1 6.6786 0.3935 -2.2777 32 1 7.3976 -0.8722 -3.3017 33 1 10.2967 1.1233 -2.0303 34 1 8.7169 1.7296 -2.5826 35 1 10.0643 0.9686 -4.4024 36 1 9.4637 0.4845 0.1908 37 1 7.8848 1.1861 -0.2383 38 1 8.3799 -1.7087 0.5939 39 1 7.6601 -0.4427 1.6177 40 1 5.1446 2.6038 -0.0114 41 1 4.6700 5.0964 0.8254 42 1 4.1380 5.1547 -2.0282 43 1 3.3400 7.7042 0.1368 44 1 1.7190 6.2729 -0.9785 45 1 1.3303 4.5078 -0.0013 46 1 0.2138 2.3195 0.0086 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:25 Heat of formation + Delta-G solvation = -131.322481 kcal Electronic energy + Delta-G solvation = -28533.780664 eV Core-core repulsion = 24582.991660 eV Total energy + Delta-G solvation = -3950.789004 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.81142 -40.76534 -39.24836 -39.12110 -37.42593 -37.23663 -34.68417 -32.93445 -31.92474 -31.79137 -31.05786 -28.58724 -26.51541 -26.23757 -25.11505 -23.66883 -22.93299 -22.03040 -21.59694 -20.09079 -19.55152 -18.49790 -18.22496 -18.15434 -17.27892 -16.85836 -16.56394 -16.48613 -16.23298 -16.03901 -15.91162 -15.75432 -15.58351 -14.88010 -14.81645 -14.75584 -14.57645 -14.37271 -13.88367 -13.63889 -13.53305 -13.30271 -13.19400 -13.16596 -12.97434 -12.47027 -12.42429 -12.26576 -12.15609 -12.09599 -11.71136 -11.55122 -11.29354 -11.10063 -10.87664 -10.83394 -10.50973 -10.21612 -9.87243 -9.28699 -5.04836 -0.23885 0.18724 1.19355 1.49772 1.87718 1.91614 2.21754 2.25183 2.75471 3.18686 3.27432 3.49591 3.58942 3.63359 3.67277 3.73213 3.90030 3.98399 4.03468 4.08723 4.19686 4.20223 4.25316 4.33473 4.36871 4.45063 4.46414 4.48753 4.52367 4.57297 4.61570 4.65752 4.68330 4.76537 4.88273 4.97435 5.03227 5.07215 5.12390 5.15915 5.22869 5.32880 5.43804 5.46002 5.49405 5.66637 6.29635 6.30995 6.63757 6.68323 7.42376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.278 6.278 3 C 0.193 3.807 4 C -0.174 4.174 5 C 0.561 3.439 6 O -0.516 6.516 7 N -0.723 5.723 8 C 0.147 3.853 9 H 0.090 0.910 10 C -0.132 4.132 11 C -0.108 4.108 12 C -0.088 4.088 13 H 0.080 0.920 14 C 0.079 3.921 15 O -0.573 6.573 16 C -0.115 4.115 17 C -0.126 4.126 18 C -0.020 4.020 19 C -0.167 4.167 20 C -0.069 4.069 21 O -0.530 6.530 22 Si 0.683 3.317 23 C -0.050 4.050 24 C -0.214 4.214 25 H 0.059 0.941 26 H 0.057 0.943 27 H 0.105 0.895 28 H 0.396 0.604 29 H 0.073 0.927 30 H 0.069 0.931 31 H 0.059 0.941 32 H 0.070 0.930 33 H 0.045 0.955 34 H 0.044 0.956 35 H 0.380 0.620 36 H 0.070 0.930 37 H 0.061 0.939 38 H 0.082 0.918 39 H 0.073 0.927 40 H 0.133 0.867 41 H 0.119 0.881 42 H 0.376 0.624 43 H -0.256 1.256 44 H -0.260 1.260 45 H 0.134 0.866 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.691 4.020 2.116 4.595 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.177 4.177 5 C 0.348 3.652 6 O -0.392 6.392 7 N -0.377 5.377 8 C 0.043 3.957 9 H 0.108 0.892 10 C -0.170 4.170 11 C -0.145 4.145 12 C -0.107 4.107 13 H 0.098 0.902 14 C 0.001 3.999 15 O -0.378 6.378 16 C -0.152 4.152 17 C -0.164 4.164 18 C -0.039 4.039 19 C -0.167 4.167 20 C -0.179 4.179 21 O -0.337 6.337 22 Si 0.585 3.415 23 C -0.067 4.067 24 C -0.233 4.233 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.123 0.877 28 H 0.232 0.768 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.077 0.923 32 H 0.088 0.912 33 H 0.063 0.937 34 H 0.063 0.937 35 H 0.227 0.773 36 H 0.089 0.911 37 H 0.079 0.921 38 H 0.101 0.899 39 H 0.091 0.909 40 H 0.151 0.849 41 H 0.137 0.863 42 H 0.224 0.776 43 H -0.181 1.181 44 H -0.185 1.185 45 H 0.151 0.849 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -1.167 3.228 2.421 4.200 hybrid contribution 0.475 0.862 -1.378 1.693 sum -0.692 4.090 1.043 4.277 Atomic orbital electron populations 1.23235 0.78222 1.04758 1.01423 1.86388 1.21163 1.25179 1.86152 1.19099 0.90963 0.85053 0.90466 1.19378 0.90933 0.94000 1.13436 1.17933 0.81970 0.88590 0.76690 1.90841 1.71528 1.28530 1.48270 1.46023 1.05716 1.09756 1.76209 1.20948 0.90828 0.87009 0.96899 0.89158 1.21939 1.01386 0.98680 0.95010 1.21471 0.94510 0.99000 0.99535 1.21178 0.97028 0.98881 0.93594 0.90190 1.22235 0.98284 0.95886 0.83511 1.86479 1.82262 1.44923 1.24142 1.21521 1.00972 0.98323 0.94417 1.21816 0.95061 1.00263 0.99256 1.20954 0.99751 0.89911 0.93266 1.20045 0.93534 0.95876 1.07285 1.24934 1.04115 0.99056 0.89745 1.86596 1.37479 1.94262 1.15332 0.95006 0.78792 0.77643 0.90089 1.21033 0.93786 0.97459 0.94461 1.21232 1.00728 0.91575 1.09734 0.92240 0.92398 0.87665 0.76789 0.90888 0.91213 0.92276 0.91163 0.93681 0.93724 0.77341 0.91118 0.92081 0.89949 0.90859 0.84915 0.86322 0.77584 1.18072 1.18490 0.84875 0.84177 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.03 8.57 -40.55 -0.35 -1.38 16 3 C 0.19 0.48 6.70 -38.70 -0.26 0.22 16 4 C -0.17 -0.41 5.89 -104.85 -0.62 -1.03 16 5 C 0.56 2.17 7.73 -12.47 -0.10 2.07 16 6 O -0.52 -3.93 14.82 -16.59 -0.25 -4.18 16 7 N -0.72 -0.60 4.18 -54.85 -0.23 -0.83 16 8 C 0.15 0.11 2.78 -67.92 -0.19 -0.08 16 9 H 0.09 0.22 7.58 -51.93 -0.39 -0.18 16 10 C -0.13 -0.18 5.60 -26.73 -0.15 -0.33 16 11 C -0.11 -0.10 4.94 -26.73 -0.13 -0.23 16 12 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 13 H 0.08 0.05 8.14 -51.92 -0.42 -0.37 16 14 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 15 O -0.57 -0.58 13.19 -35.23 -0.46 -1.05 16 16 C -0.11 0.21 5.03 -26.74 -0.13 0.08 16 17 C -0.13 0.18 5.61 -26.73 -0.15 0.03 16 18 C -0.02 0.00 9.16 -39.20 -0.36 -0.36 16 19 C -0.17 0.14 5.35 -104.67 -0.56 -0.42 16 20 C -0.07 0.11 2.79 36.01 0.10 0.21 16 21 O -0.53 0.11 12.83 -35.23 -0.45 -0.34 16 22 Si 0.68 -1.37 29.87 -169.99 -5.08 -6.45 16 23 C -0.05 0.06 8.65 -39.53 -0.34 -0.29 16 24 C -0.21 0.04 9.03 -39.48 -0.36 -0.32 16 25 H 0.06 -0.14 7.65 -51.93 -0.40 -0.53 16 26 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 27 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.40 -0.49 4.90 -40.82 -0.20 -0.69 16 29 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 30 H 0.07 0.24 8.14 -51.93 -0.42 -0.18 16 31 H 0.06 0.07 7.60 -51.92 -0.39 -0.33 16 32 H 0.07 0.18 7.82 -51.93 -0.41 -0.23 16 33 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.04 -0.04 8.14 -51.93 -0.42 -0.47 16 35 H 0.38 -1.13 9.12 45.56 0.42 -0.71 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.06 -0.15 6.51 -51.92 -0.34 -0.49 16 38 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 39 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.13 -0.24 6.40 -52.48 -0.34 -0.57 16 41 H 0.12 -0.30 7.96 -51.93 -0.41 -0.71 16 42 H 0.38 -1.00 8.70 45.56 0.40 -0.61 16 43 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 44 H -0.26 0.04 7.00 56.52 0.40 0.43 16 45 H 0.13 -0.41 4.81 -52.49 -0.25 -0.66 16 46 H 0.14 -0.33 6.30 -52.49 -0.33 -0.66 16 LS Contribution 361.81 15.07 5.45 5.45 Total: 0.00 -9.15 361.81 -9.66 -18.81 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -6.06 Total: -10.58 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -2.23 Total: 0.54 kcal Atomic # 7 Polarization: -0.60 SS G_CDS: -0.23 Total: -0.83 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -1.51 Total: -6.95 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: -5.08 Total: -6.45 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.15 -9.66 -18.81 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.513 kcal (2) G-P(sol) polarization free energy of solvation -9.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.667 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.656 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds