Wall clock time and date at job start Mon Mar 8 2021 02:32:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35657 * 116.99980 * 2 1 4 4 C 1.40132 * 120.14824 * 180.02562 * 3 2 1 5 5 C 1.47532 * 120.19511 * 0.02562 * 4 3 2 6 6 O 1.21587 * 120.00149 * 359.71706 * 5 4 3 7 7 N 1.34774 * 120.00080 * 179.72336 * 5 4 3 8 8 C 1.46502 * 120.00163 * 179.97438 * 7 5 4 9 9 H 1.08992 * 109.47338 * 325.00305 * 8 7 5 10 10 C 1.53006 * 109.46875 * 85.00141 * 8 7 5 11 11 C 1.52997 * 109.47380 * 60.00145 * 10 8 7 12 12 C 1.53001 * 109.47242 * 59.99720 * 11 10 8 13 13 H 1.09008 * 109.46731 * 60.00294 * 12 11 10 14 14 C 1.52997 * 109.47242 * 179.97438 * 12 11 10 15 15 O 1.42898 * 109.47319 * 295.00540 * 14 12 11 16 16 C 1.52994 * 109.47368 * 300.00569 * 12 11 10 17 17 C 1.52997 * 109.47404 * 59.99530 * 16 12 11 18 18 C 1.39709 * 119.61487 * 179.72366 * 4 3 2 19 19 C 1.37786 * 119.90921 * 0.25385 * 18 4 3 20 20 C 1.50702 * 119.85297 * 180.02562 * 19 18 4 21 21 O 1.42900 * 109.47261 * 64.99957 * 20 19 18 22 22 Si 1.86302 * 109.47130 * 184.99827 * 20 19 18 23 23 C 1.38552 * 120.30071 * 359.97438 * 19 18 4 24 24 C 1.38056 * 120.38608 * 0.02562 * 23 19 18 25 25 H 1.09006 * 109.47437 * 299.99972 * 1 2 3 26 26 H 1.09002 * 109.47482 * 60.00443 * 1 2 3 27 27 H 1.09000 * 109.47375 * 179.97438 * 1 2 3 28 28 H 0.97006 * 120.00602 * 359.97438 * 7 5 4 29 29 H 1.08998 * 109.47136 * 180.02562 * 10 8 7 30 30 H 1.09000 * 109.46811 * 299.99928 * 10 8 7 31 31 H 1.09008 * 109.47017 * 300.00189 * 11 10 8 32 32 H 1.08998 * 109.47192 * 180.02562 * 11 10 8 33 33 H 1.09002 * 109.47153 * 175.00232 * 14 12 11 34 34 H 1.09001 * 109.46832 * 55.00423 * 14 12 11 35 35 H 0.96701 * 113.99881 * 180.02562 * 15 14 12 36 36 H 1.09000 * 109.47476 * 179.97438 * 16 12 11 37 37 H 1.09008 * 109.46970 * 299.99579 * 16 12 11 38 38 H 1.08995 * 109.47630 * 59.99990 * 17 16 12 39 39 H 1.09002 * 109.47754 * 180.02562 * 17 16 12 40 40 H 1.08003 * 120.04737 * 180.27854 * 18 4 3 41 41 H 1.09002 * 109.46873 * 304.99492 * 20 19 18 42 42 H 0.96701 * 114.00432 * 59.99590 * 21 20 19 43 43 H 1.48497 * 109.99902 * 179.97438 * 22 20 19 44 44 H 1.48498 * 110.00038 * 301.31547 * 22 20 19 45 45 H 1.08001 * 119.80543 * 180.02562 * 23 19 18 46 46 H 1.08001 * 119.95477 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4440 1.2857 -0.0005 5 6 4.2549 0.0532 -0.0017 6 8 3.7095 -1.0334 0.0030 7 7 5.6004 0.1318 -0.0078 8 6 6.4057 -1.0921 -0.0084 9 1 5.9048 -1.8568 0.5850 10 6 6.5746 -1.5907 -1.4450 11 6 7.2777 -0.5172 -2.2782 12 6 8.6529 -0.2231 -1.6753 13 1 9.2520 -1.1338 -1.6758 14 6 9.3562 0.8499 -2.5088 15 8 9.6184 0.3404 -3.8179 16 6 8.4840 0.2754 -0.2388 17 6 7.7809 -0.7981 0.5943 18 6 4.0667 2.5363 -0.0064 19 6 3.3037 3.6837 -0.0063 20 6 3.9766 5.0321 -0.0132 21 8 4.6934 5.2005 -1.2379 22 14 2.6890 6.3696 0.1417 23 6 1.9205 3.6034 -0.0009 24 6 1.2924 2.3740 0.0049 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 6.0357 0.9987 -0.0119 29 1 7.1733 -2.5015 -1.4455 30 1 5.5949 -1.8001 -1.8745 31 1 6.6786 0.3935 -2.2777 32 1 7.3976 -0.8722 -3.3017 33 1 10.2967 1.1233 -2.0303 34 1 8.7169 1.7296 -2.5826 35 1 10.0643 0.9686 -4.4024 36 1 9.4637 0.4845 0.1908 37 1 7.8848 1.1861 -0.2383 38 1 8.3799 -1.7087 0.5939 39 1 7.6601 -0.4427 1.6177 40 1 5.1446 2.6038 -0.0114 41 1 4.6700 5.0964 0.8254 42 1 4.1380 5.1547 -2.0282 43 1 3.3400 7.7042 0.1368 44 1 1.7190 6.2729 -0.9785 45 1 1.3303 4.5078 -0.0013 46 1 0.2138 2.3195 0.0086 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:24 Heat of formation + Delta-G solvation = -132.693801 kcal Electronic energy + Delta-G solvation = -28533.840129 eV Core-core repulsion = 24582.991660 eV Total energy + Delta-G solvation = -3950.848469 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.89273 -40.82457 -39.28201 -39.21599 -37.45362 -37.22230 -34.83866 -32.96266 -31.90170 -31.82228 -31.09161 -28.52534 -26.52630 -26.16625 -25.17058 -23.69293 -22.91898 -22.04510 -21.67103 -20.19254 -19.57453 -18.48512 -18.21148 -18.19600 -17.28888 -16.91375 -16.64940 -16.51565 -16.18440 -16.06624 -15.87333 -15.83946 -15.57166 -14.98398 -14.78158 -14.76195 -14.53192 -14.46650 -13.93745 -13.62072 -13.51347 -13.35454 -13.19881 -13.12722 -13.02447 -12.46848 -12.41072 -12.21591 -12.15547 -12.05279 -11.65982 -11.57699 -11.32653 -11.12368 -11.01678 -10.82313 -10.54622 -10.26874 -10.00737 -9.30762 -4.89308 -0.26778 0.20584 1.33449 1.61294 1.78337 1.99072 2.12312 2.26520 2.67659 3.29379 3.41632 3.54680 3.63015 3.67529 3.70708 3.73456 3.89587 3.99330 4.04469 4.14599 4.26727 4.29436 4.34620 4.38036 4.40580 4.41577 4.47650 4.49202 4.62129 4.64723 4.67348 4.70846 4.73922 4.76052 4.91780 4.99500 5.04147 5.08704 5.11396 5.13851 5.21545 5.26634 5.38351 5.42400 5.53227 5.56242 6.29661 6.50791 6.53080 6.88330 7.23470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.314 6.314 3 C 0.171 3.829 4 C -0.197 4.197 5 C 0.555 3.445 6 O -0.565 6.565 7 N -0.708 5.708 8 C 0.148 3.852 9 H 0.069 0.931 10 C -0.127 4.127 11 C -0.100 4.100 12 C -0.086 4.086 13 H 0.071 0.929 14 C 0.076 3.924 15 O -0.597 6.597 16 C -0.110 4.110 17 C -0.119 4.119 18 C -0.016 4.016 19 C -0.163 4.163 20 C -0.072 4.072 21 O -0.546 6.546 22 Si 0.760 3.240 23 C -0.045 4.045 24 C -0.212 4.212 25 H 0.076 0.924 26 H 0.071 0.929 27 H 0.106 0.894 28 H 0.408 0.592 29 H 0.076 0.924 30 H 0.040 0.960 31 H 0.057 0.943 32 H 0.051 0.949 33 H 0.059 0.941 34 H 0.051 0.949 35 H 0.395 0.605 36 H 0.086 0.914 37 H 0.071 0.929 38 H 0.087 0.913 39 H 0.083 0.917 40 H 0.149 0.851 41 H 0.132 0.868 42 H 0.386 0.614 43 H -0.304 1.304 44 H -0.281 1.281 45 H 0.156 0.844 46 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.242 5.866 2.787 6.499 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.122 3.878 4 C -0.201 4.201 5 C 0.344 3.656 6 O -0.445 6.445 7 N -0.362 5.362 8 C 0.043 3.957 9 H 0.088 0.912 10 C -0.166 4.166 11 C -0.138 4.138 12 C -0.105 4.105 13 H 0.089 0.911 14 C -0.001 4.001 15 O -0.405 6.405 16 C -0.147 4.147 17 C -0.157 4.157 18 C -0.035 4.035 19 C -0.164 4.164 20 C -0.181 4.181 21 O -0.354 6.354 22 Si 0.666 3.334 23 C -0.062 4.062 24 C -0.231 4.231 25 H 0.094 0.906 26 H 0.089 0.911 27 H 0.125 0.875 28 H 0.246 0.754 29 H 0.095 0.905 30 H 0.059 0.941 31 H 0.076 0.924 32 H 0.070 0.930 33 H 0.077 0.923 34 H 0.070 0.930 35 H 0.244 0.756 36 H 0.105 0.895 37 H 0.089 0.911 38 H 0.106 0.894 39 H 0.102 0.898 40 H 0.166 0.834 41 H 0.150 0.850 42 H 0.235 0.765 43 H -0.233 1.233 44 H -0.207 1.207 45 H 0.173 0.827 46 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -0.690 5.087 3.089 5.991 hybrid contribution 0.332 0.343 -1.642 1.710 sum -0.359 5.431 1.447 5.631 Atomic orbital electron populations 1.23443 0.76558 1.05439 1.02847 1.86340 1.23180 1.26455 1.86560 1.19422 0.91356 0.85540 0.91442 1.19450 0.91195 0.94091 1.15342 1.18317 0.82753 0.88618 0.75911 1.90804 1.72513 1.30317 1.50825 1.45923 1.04953 1.10407 1.74925 1.20930 0.91979 0.86599 0.96145 0.91247 1.21873 0.99922 0.99284 0.95528 1.21374 0.95503 0.98438 0.98450 1.21165 0.95693 0.98904 0.94703 0.91084 1.22314 0.99025 0.95750 0.83034 1.86441 1.82679 1.46291 1.25108 1.21510 1.01912 0.98254 0.93042 1.21786 0.93345 1.00922 0.99631 1.21092 1.00607 0.89196 0.92607 1.20167 0.93740 0.95879 1.06581 1.25107 1.04649 0.98562 0.89829 1.86575 1.38436 1.94264 1.16135 0.94141 0.76734 0.74139 0.88358 1.21313 0.93911 0.97909 0.93090 1.21465 1.01732 0.90921 1.08958 0.90587 0.91071 0.87518 0.75380 0.90502 0.94095 0.92426 0.93038 0.92306 0.93040 0.75604 0.89545 0.91074 0.89409 0.89824 0.83381 0.85036 0.76503 1.23277 1.20710 0.82681 0.82103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 9.81 113.37 1.11 1.11 16 2 O -0.31 -2.93 8.57 -68.81 -0.59 -3.52 16 3 C 0.17 1.01 6.70 22.84 0.15 1.16 16 4 C -0.20 -1.14 5.89 -20.01 -0.12 -1.25 16 5 C 0.56 5.45 7.73 86.69 0.67 6.12 16 6 O -0.56 -10.52 14.82 16.93 0.25 -10.27 16 7 N -0.71 -1.94 4.18 -445.70 -1.86 -3.80 16 8 C 0.15 0.42 2.78 44.99 0.13 0.55 16 9 H 0.07 0.51 7.58 -2.39 -0.02 0.49 16 10 C -0.13 -0.61 5.60 30.60 0.17 -0.44 16 11 C -0.10 -0.31 4.94 30.59 0.15 -0.16 16 12 C -0.09 0.07 2.43 -10.80 -0.03 0.04 16 13 H 0.07 0.09 8.14 -2.38 -0.02 0.07 16 14 C 0.08 -0.12 6.43 71.98 0.46 0.34 16 15 O -0.60 -1.21 13.19 -148.98 -1.97 -3.17 16 16 C -0.11 0.55 5.03 30.59 0.15 0.70 16 17 C -0.12 0.39 5.61 30.59 0.17 0.56 16 18 C -0.02 0.01 9.16 22.52 0.21 0.21 16 19 C -0.16 0.49 5.35 -19.90 -0.11 0.38 16 20 C -0.07 0.35 2.79 71.24 0.20 0.54 16 21 O -0.55 0.95 12.83 -148.98 -1.91 -0.96 16 22 Si 0.76 -4.02 29.87 68.60 2.05 -1.97 16 23 C -0.04 0.17 8.65 22.30 0.19 0.36 16 24 C -0.21 0.21 9.03 22.34 0.20 0.41 16 25 H 0.08 -0.35 7.65 -2.38 -0.02 -0.37 16 26 H 0.07 -0.28 7.67 -2.39 -0.02 -0.30 16 27 H 0.11 -0.19 8.14 -2.39 -0.02 -0.21 16 28 H 0.41 -1.07 4.90 -92.70 -0.45 -1.52 16 29 H 0.08 0.28 8.14 -2.39 -0.02 0.26 16 30 H 0.04 0.43 8.14 -2.39 -0.02 0.41 16 31 H 0.06 0.18 7.60 -2.38 -0.02 0.16 16 32 H 0.05 0.35 7.82 -2.39 -0.02 0.34 16 33 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.39 -2.41 9.12 -74.06 -0.68 -3.09 16 36 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 37 H 0.07 -0.48 6.51 -2.38 -0.02 -0.50 16 38 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 39 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 40 H 0.15 -0.69 6.40 -2.91 -0.02 -0.71 16 41 H 0.13 -0.94 7.96 -2.39 -0.02 -0.96 16 42 H 0.39 -2.49 8.70 -74.06 -0.64 -3.13 16 43 H -0.30 -0.95 7.11 99.48 0.71 -0.24 16 44 H -0.28 0.50 7.00 99.48 0.70 1.20 16 45 H 0.16 -1.32 4.81 -2.91 -0.01 -1.34 16 46 H 0.16 -0.97 6.30 -2.91 -0.02 -0.98 16 Total: 0.00 -24.28 361.81 -1.03 -25.31 By element: Atomic # 1 Polarization: -11.53 SS G_CDS: -0.72 Total: -12.25 kcal Atomic # 6 Polarization: 6.91 SS G_CDS: 3.72 Total: 10.63 kcal Atomic # 7 Polarization: -1.94 SS G_CDS: -1.86 Total: -3.80 kcal Atomic # 8 Polarization: -13.71 SS G_CDS: -4.22 Total: -17.93 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.05 Total: -1.97 kcal Total: -24.28 -1.03 -25.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.379 kcal (2) G-P(sol) polarization free energy of solvation -24.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.662 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.032 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds