Wall clock time and date at job start Mon Mar 8 2021 02:32:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.47369 * 2 1 4 4 C 1.50702 * 109.47356 * 239.99899 * 2 1 3 5 5 C 1.37808 * 119.94253 * 255.00396 * 4 2 1 6 6 C 1.39673 * 119.88476 * 179.97438 * 5 4 2 7 7 C 1.47725 * 120.12106 * 179.97438 * 6 5 4 8 8 O 1.21569 * 120.00078 * 359.97438 * 7 6 5 9 9 N 1.34779 * 119.99706 * 179.97438 * 7 6 5 10 10 C 1.46500 * 119.99741 * 179.97438 * 9 7 6 11 11 H 1.09000 * 109.47175 * 35.00237 * 10 9 7 12 12 C 1.52997 * 109.47204 * 155.00342 * 10 9 7 13 13 C 1.53002 * 109.46978 * 59.99799 * 12 10 9 14 14 C 1.52996 * 109.46891 * 60.00410 * 13 12 10 15 15 H 1.09001 * 109.47372 * 59.99964 * 14 13 12 16 16 C 1.53001 * 109.47302 * 179.97438 * 14 13 12 17 17 O 1.42899 * 109.47310 * 295.00121 * 16 14 13 18 18 C 1.53000 * 109.47328 * 299.99597 * 14 13 12 19 19 C 1.52997 * 109.47060 * 60.00126 * 18 14 13 20 20 C 1.39634 * 119.76055 * 0.24830 * 6 5 4 21 21 C 1.37860 * 119.87509 * 359.46958 * 20 6 5 22 22 C 1.38634 * 120.12303 * 0.53708 * 21 20 6 23 23 F 1.35099 * 119.87951 * 179.71858 * 22 21 20 24 24 H 0.96702 * 113.99881 * 60.00220 * 1 2 3 25 25 H 1.09000 * 109.47440 * 120.00135 * 2 1 3 26 26 H 1.48509 * 109.99474 * 298.68150 * 3 2 1 27 27 H 1.48495 * 109.99816 * 59.99584 * 3 2 1 28 28 H 1.08000 * 120.05786 * 359.97354 * 5 4 2 29 29 H 0.96997 * 120.00149 * 0.02562 * 9 7 6 30 30 H 1.09002 * 109.47045 * 299.99966 * 12 10 9 31 31 H 1.09001 * 109.47375 * 179.97438 * 12 10 9 32 32 H 1.08992 * 109.47056 * 300.00064 * 13 12 10 33 33 H 1.09004 * 109.47006 * 180.02562 * 13 12 10 34 34 H 1.09002 * 109.46989 * 54.99886 * 16 14 13 35 35 H 1.08994 * 109.47704 * 174.99699 * 16 14 13 36 36 H 0.96693 * 114.00385 * 179.97438 * 17 16 14 37 37 H 1.09002 * 109.47398 * 180.02562 * 18 14 13 38 38 H 1.09001 * 109.47194 * 300.00476 * 18 14 13 39 39 H 1.08998 * 109.47533 * 59.99948 * 19 18 14 40 40 H 1.08996 * 109.47853 * 180.02562 * 19 18 14 41 41 H 1.07994 * 120.06119 * 179.75197 * 20 6 5 42 42 H 1.08001 * 119.94100 * 180.25055 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4520 -1.9821 -1.1261 6 6 2.9168 -2.6396 -2.2674 7 6 3.4764 -4.0027 -2.1614 8 8 3.5335 -4.5539 -1.0794 9 7 3.9237 -4.6350 -3.2644 10 6 4.4792 -5.9866 -3.1592 11 1 3.9419 -6.5414 -2.3902 12 6 4.3324 -6.7042 -4.5024 13 6 5.0866 -5.9253 -5.5820 14 6 6.5679 -5.8403 -5.2084 15 1 6.9812 -6.8459 -5.1302 16 6 7.3223 -5.0620 -6.2882 17 8 7.2834 -5.7915 -7.5163 18 6 6.7148 -5.1226 -3.8652 19 6 5.9605 -5.9015 -2.7857 20 6 2.8559 -2.0017 -3.5080 21 6 2.3278 -0.7317 -3.6019 22 6 1.8679 -0.0837 -2.4659 23 9 1.3566 1.1631 -2.5628 24 1 -0.3933 0.4417 -0.7651 25 1 1.7924 -0.5138 0.8900 26 1 1.5879 2.4585 -1.2243 27 1 1.5615 2.4679 1.2084 28 1 2.5005 -2.4694 -0.1635 29 1 3.8785 -4.1950 -4.1276 30 1 3.2771 -6.7648 -4.7686 31 1 4.7461 -7.7097 -4.4244 32 1 4.6733 -4.9198 -5.6602 33 1 4.9817 -6.4364 -6.5390 34 1 6.8530 -4.0883 -6.4290 35 1 8.3587 -4.9245 -5.9799 36 1 7.7429 -5.3561 -8.2472 37 1 7.7701 -5.0617 -3.5993 38 1 6.3015 -4.1171 -3.9434 39 1 6.3737 -6.9071 -2.7074 40 1 6.0647 -5.3901 -1.8288 41 1 3.2176 -2.5040 -4.3929 42 1 2.2764 -0.2389 -4.5615 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:28 Heat of formation + Delta-G solvation = -134.943777 kcal Electronic energy + Delta-G solvation = -26136.842511 eV Core-core repulsion = 22190.662311 eV Total energy + Delta-G solvation = -3946.180200 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -50.48835 -41.67884 -40.38327 -39.19759 -37.79878 -37.49270 -34.94082 -33.11604 -32.33444 -31.91450 -31.04899 -27.08531 -26.59274 -24.98414 -23.78224 -23.60267 -22.28802 -21.75596 -20.28357 -19.38116 -18.91166 -18.35927 -18.00662 -17.85815 -17.16993 -16.84278 -16.64814 -16.25620 -16.00198 -15.88588 -15.60735 -15.33196 -15.12314 -15.02672 -14.85118 -14.64609 -14.11519 -14.06762 -13.73704 -13.50220 -13.33477 -13.23832 -13.13680 -12.99536 -12.61723 -12.36990 -12.25897 -11.63319 -11.41640 -11.26746 -11.20209 -11.08818 -10.96032 -10.82715 -10.22876 -10.14107 -9.86826 -4.95879 -0.56738 -0.08282 1.20449 1.58818 1.62987 1.98361 2.04882 2.53352 2.89024 3.11451 3.18400 3.39677 3.45329 3.49576 3.56586 3.63226 3.77617 3.80485 4.00989 4.03209 4.12395 4.21497 4.29010 4.29882 4.37789 4.39002 4.51052 4.55661 4.60183 4.64917 4.67933 4.75972 4.87718 4.91167 4.95442 5.00537 5.03477 5.07043 5.12101 5.29380 5.32552 5.44071 5.51352 6.27477 6.39521 6.59476 7.13308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C -0.010 4.010 6 C -0.143 4.143 7 C 0.561 3.439 8 O -0.530 6.530 9 N -0.718 5.718 10 C 0.145 3.855 11 H 0.092 0.908 12 C -0.130 4.130 13 C -0.111 4.111 14 C -0.089 4.089 15 H 0.081 0.919 16 C 0.079 3.921 17 O -0.573 6.573 18 C -0.112 4.112 19 C -0.130 4.130 20 C -0.056 4.056 21 C -0.152 4.152 22 C 0.118 3.882 23 F -0.123 7.123 24 H 0.375 0.625 25 H 0.125 0.875 26 H -0.231 1.231 27 H -0.259 1.259 28 H 0.151 0.849 29 H 0.398 0.602 30 H 0.071 0.929 31 H 0.082 0.918 32 H 0.055 0.945 33 H 0.076 0.924 34 H 0.044 0.956 35 H 0.046 0.954 36 H 0.380 0.620 37 H 0.066 0.934 38 H 0.063 0.937 39 H 0.076 0.924 40 H 0.072 0.928 41 H 0.136 0.864 42 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.876 0.898 -4.796 6.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.152 4.152 5 C -0.029 4.029 6 C -0.146 4.146 7 C 0.348 3.652 8 O -0.407 6.407 9 N -0.371 5.371 10 C 0.041 3.959 11 H 0.110 0.890 12 C -0.167 4.167 13 C -0.149 4.149 14 C -0.107 4.107 15 H 0.099 0.901 16 C 0.001 3.999 17 O -0.379 6.379 18 C -0.150 4.150 19 C -0.168 4.168 20 C -0.075 4.075 21 C -0.171 4.171 22 C 0.099 3.901 23 F -0.101 7.101 24 H 0.223 0.777 25 H 0.142 0.858 26 H -0.154 1.154 27 H -0.184 1.184 28 H 0.168 0.832 29 H 0.235 0.765 30 H 0.090 0.910 31 H 0.101 0.899 32 H 0.074 0.926 33 H 0.095 0.905 34 H 0.062 0.938 35 H 0.064 0.936 36 H 0.227 0.773 37 H 0.085 0.915 38 H 0.082 0.918 39 H 0.094 0.906 40 H 0.091 0.909 41 H 0.154 0.846 42 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.430 0.635 -3.103 4.668 hybrid contribution -0.810 0.661 -1.400 1.747 sum 2.620 1.296 -4.502 5.368 Atomic orbital electron populations 1.86659 1.17100 1.79906 1.49265 1.24993 0.84287 1.11457 0.97558 0.95467 0.91438 0.74685 0.81007 1.20271 1.04084 0.96432 0.94449 1.21044 0.91385 0.91274 0.99152 1.20038 1.04756 0.95419 0.94394 1.18108 0.77554 0.85213 0.84334 1.90817 1.55796 1.66964 1.27102 1.46045 1.63255 1.17712 1.10119 1.21015 0.94159 0.82277 0.98425 0.88989 1.21870 1.01289 0.99932 0.93655 1.21525 0.94149 1.00090 0.99098 1.21191 0.95725 1.00501 0.93321 0.90105 1.22233 0.98939 0.94039 0.84717 1.86469 1.79797 1.50769 1.20858 1.21486 1.00688 0.99198 0.93594 1.21903 0.94432 1.01501 0.98964 1.21168 0.95714 0.93801 0.96806 1.21092 1.01780 0.96000 0.98231 1.17902 0.97342 0.80491 0.94393 1.91576 1.84473 1.37678 1.96419 0.77706 0.85755 1.15437 1.18440 0.83179 0.76528 0.90987 0.89912 0.92611 0.90518 0.93762 0.93594 0.77251 0.91511 0.91823 0.90586 0.90913 0.84590 0.83590 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.01 12.88 -35.23 -0.45 -1.46 16 2 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.67 -0.16 30.81 -169.99 -5.24 -5.40 16 4 C -0.15 0.00 4.78 -104.62 -0.50 -0.50 16 5 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 6 C -0.14 0.02 5.87 -104.96 -0.62 -0.59 16 7 C 0.56 0.69 7.73 -12.38 -0.10 0.59 16 8 O -0.53 -2.61 16.01 5.30 0.08 -2.53 16 9 N -0.72 0.98 4.18 -54.78 -0.23 0.75 16 10 C 0.15 -0.15 2.78 -67.93 -0.19 -0.34 16 11 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 12 C -0.13 0.29 5.61 -26.73 -0.15 0.14 16 13 C -0.11 0.25 4.93 -26.73 -0.13 0.12 16 14 C -0.09 0.16 2.43 -90.62 -0.22 -0.06 16 15 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 16 C 0.08 -0.15 6.43 37.16 0.24 0.09 16 17 O -0.57 0.38 13.19 -35.23 -0.46 -0.09 16 18 C -0.11 0.23 5.05 -26.73 -0.13 0.10 16 19 C -0.13 0.14 5.60 -26.73 -0.15 -0.01 16 20 C -0.06 0.13 9.54 -39.20 -0.37 -0.24 16 21 C -0.15 0.29 10.01 -39.57 -0.40 -0.11 16 22 C 0.12 -0.03 6.63 -39.27 -0.26 -0.29 16 23 F -0.12 -0.09 12.57 2.25 0.03 -0.06 16 24 H 0.38 -0.22 8.41 45.56 0.38 0.17 16 25 H 0.12 -0.10 7.77 -51.93 -0.40 -0.51 16 26 H -0.23 -0.36 5.27 56.52 0.30 -0.06 16 27 H -0.26 -0.79 7.11 56.52 0.40 -0.38 16 28 H 0.15 0.09 7.59 -52.49 -0.40 -0.31 16 29 H 0.40 -1.42 4.89 -40.82 -0.20 -1.61 16 30 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 31 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 32 H 0.06 -0.18 6.50 -51.93 -0.34 -0.52 16 33 H 0.08 -0.07 7.82 -51.93 -0.41 -0.47 16 34 H 0.04 -0.13 8.14 -51.93 -0.42 -0.55 16 35 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.38 -1.71 9.12 45.56 0.42 -1.29 16 37 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 38 H 0.06 -0.14 7.60 -51.93 -0.39 -0.54 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 41 H 0.14 -0.71 6.40 -52.49 -0.34 -1.04 16 42 H 0.15 -0.55 8.06 -52.49 -0.42 -0.98 16 LS Contribution 338.29 15.07 5.10 5.10 Total: 0.00 -7.60 338.29 -9.59 -17.19 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -5.18 Total: -12.11 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -3.24 Total: -1.39 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.23 Total: 0.75 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.83 Total: -4.08 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.03 Total: -0.06 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.24 Total: -5.40 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -7.60 -9.59 -17.19 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.757 kcal (2) G-P(sol) polarization free energy of solvation -7.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds