Wall clock time and date at job start Mon Mar 8 2021 02:32:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47175 * 2 1 4 4 C 1.50704 * 109.47055 * 120.00240 * 2 1 3 5 5 C 1.34828 * 125.65392 * 64.94671 * 4 2 1 6 6 C 1.40797 * 107.05339 * 180.02562 * 5 4 2 7 7 C 1.36115 * 106.72767 * 0.02562 * 6 5 4 8 8 C 1.47570 * 125.94235 * 179.97438 * 7 6 5 9 9 C 1.39927 * 119.95475 * 359.73093 * 8 7 6 10 10 C 1.36423 * 120.27781 * 179.71718 * 9 8 7 11 11 C 1.39874 * 120.18626 * 0.54967 * 10 9 8 12 12 C 1.47290 * 120.04996 * 179.69702 * 11 10 9 13 13 O 1.21627 * 120.00103 * 180.02562 * 12 11 10 14 14 N 1.34779 * 120.00139 * 0.02806 * 12 11 10 15 15 C 1.46490 * 120.00468 * 179.97438 * 14 12 11 16 16 H 1.09004 * 109.47161 * 34.99701 * 15 14 12 17 17 C 1.53002 * 109.47371 * 154.99855 * 15 14 12 18 18 C 1.53005 * 109.46772 * 60.00154 * 17 15 14 19 19 C 1.53002 * 109.47223 * 60.00011 * 18 17 15 20 20 H 1.09001 * 109.47004 * 59.99893 * 19 18 17 21 21 C 1.52992 * 109.47133 * 179.97438 * 19 18 17 22 22 O 1.42907 * 109.47125 * 185.00321 * 21 19 18 23 23 C 1.52995 * 109.47150 * 300.00329 * 19 18 17 24 24 C 1.53002 * 109.47839 * 59.99709 * 23 19 18 25 25 C 1.40413 * 119.90507 * 359.72569 * 11 10 9 26 26 O 1.35679 * 120.13587 * 179.97438 * 25 11 10 27 27 C 1.38267 * 119.72709 * 359.97438 * 25 11 10 28 28 O 1.34228 * 125.65139 * 244.97303 * 4 2 1 29 29 H 0.96703 * 113.99513 * 300.00016 * 1 2 3 30 30 H 1.09002 * 109.46938 * 240.00039 * 2 1 3 31 31 H 1.48503 * 109.99810 * 178.68039 * 3 2 1 32 32 H 1.48497 * 110.00134 * 299.99858 * 3 2 1 33 33 H 1.08000 * 126.47903 * 0.04485 * 5 4 2 34 34 H 1.07994 * 126.63968 * 180.26218 * 6 5 4 35 35 H 1.07998 * 119.86155 * 359.97438 * 9 8 7 36 36 H 1.07996 * 119.91094 * 180.29785 * 10 9 8 37 37 H 0.96999 * 119.99453 * 0.02562 * 14 12 11 38 38 H 1.09001 * 109.47051 * 179.97438 * 17 15 14 39 39 H 1.09000 * 109.47360 * 300.00294 * 17 15 14 40 40 H 1.09004 * 109.46781 * 180.02562 * 18 17 15 41 41 H 1.08996 * 109.46869 * 300.00290 * 18 17 15 42 42 H 1.09006 * 109.47414 * 304.99895 * 21 19 18 43 43 H 1.08995 * 109.47248 * 65.00170 * 21 19 18 44 44 H 0.96703 * 113.99838 * 180.02562 * 22 21 19 45 45 H 1.09000 * 109.47273 * 179.97438 * 23 19 18 46 46 H 1.09001 * 109.46812 * 299.99682 * 23 19 18 47 47 H 1.08992 * 109.47704 * 180.02562 * 24 23 19 48 48 H 1.08996 * 109.46592 * 59.99796 * 24 23 19 49 49 H 0.96695 * 114.00316 * 270.02626 * 26 25 11 50 50 H 1.08002 * 120.09557 * 179.97438 * 27 25 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2305 5 6 1.7559 -2.0178 1.5098 6 6 2.3795 -2.2627 2.7481 7 6 2.9070 -1.0783 3.1622 8 6 3.6556 -0.8539 4.4140 9 6 3.8707 -1.9159 5.2994 10 6 4.5668 -1.7171 6.4557 11 6 5.0608 -0.4468 6.7697 12 6 5.8062 -0.2341 8.0222 13 8 6.2350 0.8710 8.2946 14 7 6.0133 -1.2642 8.8663 15 6 6.7552 -1.0529 10.1117 16 1 6.5323 -0.0605 10.5035 17 6 6.3421 -2.1107 11.1372 18 6 6.6551 -3.5037 10.5872 19 6 8.1559 -3.6183 10.3125 20 1 8.7079 -3.4611 11.2392 21 6 8.4689 -5.0115 9.7631 22 8 9.8827 -5.1590 9.6163 23 6 8.5689 -2.5605 9.2872 24 6 8.2560 -1.1674 9.8371 25 6 4.8445 0.6257 5.8896 26 8 5.3211 1.8600 6.1898 27 6 4.1438 0.4187 4.7157 28 8 2.6272 -0.1465 2.2302 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 3.5346 1.7702 0.0321 32 1 1.5616 2.4679 -1.2085 33 1 1.2357 -2.7407 0.8989 34 1 2.4327 -3.2083 3.2671 35 1 3.4876 -2.8979 5.0644 36 1 4.7335 -2.5420 7.1325 37 1 5.6717 -2.1456 8.6488 38 1 6.8945 -1.9537 12.0637 39 1 5.2729 -2.0291 11.3328 40 1 6.3604 -4.2573 11.3175 41 1 6.1031 -3.6609 9.6605 42 1 8.0946 -5.7670 10.4539 43 1 7.9879 -5.1360 8.7930 44 1 10.1545 -6.0205 9.2712 45 1 9.6382 -2.6418 9.0918 46 1 8.0169 -2.7177 8.3605 47 1 8.5498 -0.4139 9.1065 48 1 8.8080 -1.0103 10.7637 49 1 4.7044 2.4078 6.6944 50 1 3.9737 1.2395 4.0347 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:40 Heat of formation + Delta-G solvation = -118.585170 kcal Electronic energy + Delta-G solvation = -33947.141793 eV Core-core repulsion = 29293.544507 eV Total energy + Delta-G solvation = -4653.597286 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.76560 -41.71482 -40.52949 -39.05887 -38.12911 -37.83162 -37.42176 -34.84125 -34.25105 -33.50892 -31.87623 -31.64240 -31.22271 -30.30204 -27.20002 -26.35083 -24.55039 -24.10225 -23.74059 -22.70788 -22.21280 -22.03527 -21.41315 -20.18437 -19.75044 -18.92513 -18.53486 -18.28328 -17.73450 -17.43929 -17.16830 -16.74862 -16.50397 -16.40263 -16.14975 -15.91544 -15.80068 -15.63972 -15.43337 -14.96962 -14.79409 -14.77595 -14.36274 -14.23368 -14.05034 -13.94558 -13.89875 -13.64432 -13.60638 -13.40829 -13.24178 -13.05391 -12.88879 -12.76327 -12.51905 -12.23581 -12.13170 -11.82731 -11.62095 -11.37203 -11.17813 -11.14535 -10.90091 -10.75841 -10.73217 -10.60879 -10.02934 -9.95814 -9.03794 -5.08943 -0.79695 0.09123 0.64078 1.08975 1.38006 1.44180 1.73214 1.89226 1.99769 2.12196 2.64273 2.99996 3.12475 3.19296 3.33250 3.50498 3.56051 3.63727 3.67635 3.82296 3.85465 3.88582 3.91661 3.97194 4.13669 4.17478 4.23998 4.29334 4.35268 4.37597 4.39199 4.45096 4.53319 4.55919 4.60115 4.64607 4.68954 4.74388 4.80384 4.90436 4.97162 4.97726 5.02785 5.05556 5.08587 5.16239 5.26412 5.35263 5.37077 5.39498 5.43994 5.55686 5.93414 6.33469 6.49244 6.63162 6.68729 7.26685 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.045 4.045 5 C -0.174 4.174 6 C -0.178 4.178 7 C 0.024 3.976 8 C 0.029 3.971 9 C -0.116 4.116 10 C -0.065 4.065 11 C -0.164 4.164 12 C 0.558 3.442 13 O -0.517 6.517 14 N -0.721 5.721 15 C 0.147 3.853 16 H 0.091 0.909 17 C -0.126 4.126 18 C -0.114 4.114 19 C -0.089 4.089 20 H 0.080 0.920 21 C 0.079 3.921 22 O -0.573 6.573 23 C -0.108 4.108 24 C -0.132 4.132 25 C 0.179 3.821 26 O -0.474 6.474 27 C -0.141 4.141 28 O -0.161 6.161 29 H 0.384 0.616 30 H 0.134 0.866 31 H -0.252 1.252 32 H -0.246 1.246 33 H 0.155 0.845 34 H 0.156 0.844 35 H 0.138 0.862 36 H 0.134 0.866 37 H 0.396 0.604 38 H 0.083 0.917 39 H 0.073 0.927 40 H 0.071 0.929 41 H 0.060 0.940 42 H 0.045 0.955 43 H 0.044 0.956 44 H 0.380 0.620 45 H 0.071 0.929 46 H 0.058 0.942 47 H 0.070 0.930 48 H 0.073 0.927 49 H 0.399 0.601 50 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.235 -4.526 2.363 6.633 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.138 4.138 3 Si 0.599 3.401 4 C -0.096 4.096 5 C -0.193 4.193 6 C -0.197 4.197 7 C -0.026 4.026 8 C 0.029 3.971 9 C -0.134 4.134 10 C -0.084 4.084 11 C -0.168 4.168 12 C 0.345 3.655 13 O -0.393 6.393 14 N -0.375 5.375 15 C 0.043 3.957 16 H 0.109 0.891 17 C -0.164 4.164 18 C -0.152 4.152 19 C -0.108 4.108 20 H 0.099 0.901 21 C 0.001 3.999 22 O -0.378 6.378 23 C -0.146 4.146 24 C -0.171 4.171 25 C 0.132 3.868 26 O -0.285 6.285 27 C -0.159 4.159 28 O -0.058 6.058 29 H 0.232 0.768 30 H 0.151 0.849 31 H -0.176 1.176 32 H -0.170 1.170 33 H 0.173 0.827 34 H 0.174 0.826 35 H 0.156 0.844 36 H 0.152 0.848 37 H 0.233 0.767 38 H 0.101 0.899 39 H 0.092 0.908 40 H 0.089 0.911 41 H 0.078 0.922 42 H 0.063 0.937 43 H 0.062 0.938 44 H 0.227 0.773 45 H 0.089 0.911 46 H 0.077 0.923 47 H 0.089 0.911 48 H 0.092 0.908 49 H 0.257 0.743 50 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -2.774 -2.680 1.554 4.159 hybrid contribution -0.547 -1.891 -0.266 1.986 sum -3.321 -4.571 1.288 5.795 Atomic orbital electron populations 1.86568 1.16089 1.81734 1.49155 1.24421 0.85241 1.11289 0.92890 0.94262 0.81727 0.76827 0.87234 1.22995 1.00467 0.93911 0.92176 1.21579 1.04016 0.95694 0.98013 1.21904 1.02022 0.98369 0.97388 1.20326 1.03728 0.87535 0.91013 1.17744 0.95729 0.93705 0.89938 1.20692 1.00252 0.98669 0.93811 1.20790 0.95493 0.95540 0.96577 1.20527 1.04594 0.95029 0.96619 1.17964 0.79723 0.84670 0.83110 1.90845 1.49865 1.23677 1.74962 1.46038 1.57496 1.12030 1.21898 1.20973 0.91265 0.99996 0.83515 0.89094 1.21822 1.02195 0.93863 0.98543 1.21523 0.95156 0.97385 1.01147 1.21188 0.95880 0.93688 1.00017 0.90128 1.22229 0.81719 0.96873 0.99064 1.86487 1.22532 1.40115 1.88663 1.21475 1.02002 0.93397 0.97678 1.21946 0.95273 0.97667 1.02212 1.18282 0.91344 0.85794 0.91399 1.84778 1.44596 1.22705 1.76424 1.21594 0.98711 0.97523 0.98071 1.83935 1.57599 1.37897 1.26402 0.76808 0.84897 1.17637 1.16967 0.82713 0.82650 0.84413 0.84825 0.76741 0.89876 0.90840 0.91066 0.92152 0.93658 0.93793 0.77287 0.91070 0.92300 0.91121 0.90798 0.74252 0.83806 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.36 12.88 -35.23 -0.45 -0.09 16 2 C -0.03 0.02 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.64 32.11 -169.99 -5.46 -6.10 16 4 C -0.05 -0.02 6.21 -35.52 -0.22 -0.24 16 5 C -0.17 -0.07 10.78 -39.82 -0.43 -0.50 16 6 C -0.18 0.01 10.26 -39.38 -0.40 -0.40 16 7 C 0.02 0.02 7.02 -36.54 -0.26 -0.24 16 8 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 9 C -0.12 0.18 9.48 -39.60 -0.38 -0.20 16 10 C -0.07 0.11 9.47 -39.62 -0.38 -0.27 16 11 C -0.16 -0.17 5.89 -104.79 -0.62 -0.78 16 12 C 0.56 1.28 7.72 -12.58 -0.10 1.19 16 13 O -0.52 -3.05 14.80 -16.70 -0.25 -3.30 16 14 N -0.72 0.44 4.18 -54.92 -0.23 0.21 16 15 C 0.15 -0.06 2.78 -67.93 -0.19 -0.25 16 16 H 0.09 0.11 7.58 -51.93 -0.39 -0.29 16 17 C -0.13 0.32 5.61 -26.73 -0.15 0.17 16 18 C -0.11 0.34 5.03 -26.73 -0.13 0.21 16 19 C -0.09 0.11 2.43 -90.63 -0.22 -0.11 16 20 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 21 C 0.08 -0.11 6.43 37.15 0.24 0.13 16 22 O -0.57 -0.19 13.20 -35.23 -0.46 -0.65 16 23 C -0.11 -0.01 4.94 -26.73 -0.13 -0.14 16 24 C -0.13 -0.07 5.60 -26.73 -0.15 -0.22 16 25 C 0.18 0.31 6.71 -38.75 -0.26 0.05 16 26 O -0.47 -1.20 11.56 -40.69 -0.47 -1.67 16 27 C -0.14 -0.12 9.65 -39.06 -0.38 -0.50 16 28 O -0.16 -0.20 8.79 4.75 0.04 -0.16 16 29 H 0.38 -1.70 8.70 45.56 0.40 -1.31 16 30 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 31 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 32 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 33 H 0.16 -0.11 8.06 -52.49 -0.42 -0.54 16 34 H 0.16 -0.37 7.24 -52.49 -0.38 -0.75 16 35 H 0.14 -0.53 6.95 -52.49 -0.36 -0.89 16 36 H 0.13 -0.61 6.38 -52.49 -0.33 -0.95 16 37 H 0.40 -1.17 4.87 -40.82 -0.20 -1.37 16 38 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 39 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 40 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 41 H 0.06 -0.24 6.50 -51.93 -0.34 -0.58 16 42 H 0.05 -0.10 8.14 -51.93 -0.42 -0.53 16 43 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 44 H 0.38 -1.39 9.12 45.56 0.42 -0.98 16 45 H 0.07 0.13 7.82 -51.93 -0.41 -0.27 16 46 H 0.06 0.01 7.60 -51.93 -0.39 -0.39 16 47 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 48 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 49 H 0.40 -0.54 9.06 45.56 0.41 -0.13 16 50 H 0.14 0.02 7.90 -52.49 -0.41 -0.40 16 LS Contribution 407.47 15.07 6.14 6.14 Total: 0.00 -10.57 407.47 -11.22 -21.78 By element: Atomic # 1 Polarization: -8.18 SS G_CDS: -5.42 Total: -13.59 kcal Atomic # 6 Polarization: 2.08 SS G_CDS: -4.66 Total: -2.58 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.23 Total: 0.21 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.59 Total: -5.86 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.46 Total: -6.10 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -10.57 -11.22 -21.78 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.804 kcal (2) G-P(sol) polarization free energy of solvation -10.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds