Wall clock time and date at job start Mon Mar 8 2021 02:32:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.39287 * 121.03268 * 2 1 4 4 C 1.46502 * 134.20164 * 359.95348 * 3 2 1 5 5 C 1.50700 * 126.59781 * 0.02933 * 4 3 2 6 6 O 1.42897 * 109.47761 * 74.96669 * 5 4 3 7 7 Si 1.86299 * 109.47125 * 194.97361 * 5 4 3 8 8 C 1.34173 * 106.80608 * 180.02562 * 4 3 2 9 9 N 1.36958 * 109.94744 * 0.24654 * 8 4 3 10 10 C 1.37153 * 110.11116 * 359.58677 * 9 8 4 11 11 N 1.32826 * 132.95820 * 180.02562 * 10 9 8 12 12 C 1.31304 * 121.88565 * 180.32062 * 11 10 9 13 13 C 1.39748 * 121.03017 * 179.97438 * 2 1 3 14 14 C 1.47660 * 120.45704 * 359.97438 * 13 2 1 15 15 O 1.21579 * 119.99733 * 6.05001 * 14 13 2 16 16 N 1.34775 * 120.00228 * 186.04571 * 14 13 2 17 17 C 1.46500 * 119.99765 * 179.97438 * 16 14 13 18 18 H 1.09001 * 109.47541 * 35.00288 * 17 16 14 19 19 C 1.53005 * 109.47097 * 155.00191 * 17 16 14 20 20 C 1.53001 * 109.47176 * 59.99776 * 19 17 16 21 21 C 1.53002 * 109.46561 * 60.00184 * 20 19 17 22 22 H 1.08999 * 109.47430 * 60.00272 * 21 20 19 23 23 C 1.53007 * 109.46832 * 180.02562 * 21 20 19 24 24 O 1.42900 * 109.47273 * 185.00302 * 23 21 20 25 25 C 1.52993 * 109.47468 * 299.99722 * 21 20 19 26 26 C 1.53000 * 109.47279 * 275.00091 * 17 16 14 27 27 H 1.08993 * 109.47561 * 96.29171 * 1 2 3 28 28 H 1.09008 * 109.47033 * 216.29919 * 1 2 3 29 29 H 1.09005 * 109.47104 * 336.29495 * 1 2 3 30 30 H 1.09012 * 109.46800 * 314.97034 * 5 4 3 31 31 H 0.96706 * 113.99756 * 60.00120 * 6 5 4 32 32 H 1.48505 * 109.99981 * 179.97438 * 7 5 4 33 33 H 1.48496 * 109.99756 * 301.31314 * 7 5 4 34 34 H 1.07994 * 125.02690 * 179.97438 * 8 4 3 35 35 H 0.96993 * 124.94034 * 179.72433 * 9 8 4 36 36 H 1.08002 * 119.31028 * 180.02562 * 12 11 10 37 37 H 0.96992 * 119.99787 * 0.02562 * 16 14 13 38 38 H 1.08999 * 109.47313 * 179.97438 * 19 17 16 39 39 H 1.09008 * 109.46851 * 300.00217 * 19 17 16 40 40 H 1.08995 * 109.47087 * 180.02562 * 20 19 17 41 41 H 1.09001 * 109.47319 * 300.00663 * 20 19 17 42 42 H 1.08995 * 109.46874 * 305.00183 * 23 21 20 43 43 H 1.09004 * 109.47213 * 64.99678 * 23 21 20 44 44 H 0.96697 * 114.00293 * 180.02562 * 24 23 21 45 45 H 1.09004 * 109.47472 * 180.02562 * 25 21 20 46 46 H 1.09001 * 109.47468 * 300.00168 * 25 21 20 47 47 H 1.09002 * 109.47194 * 60.00444 * 26 17 16 48 48 H 1.09001 * 109.46810 * 180.02562 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6102 -0.0009 5 6 0.4527 3.1706 -0.0014 6 8 -0.1198 3.0241 1.2996 7 14 0.5074 4.9764 -0.4562 8 6 2.9948 3.3126 -0.0009 9 7 4.0669 2.4604 -0.0057 10 6 3.6347 1.1588 0.0003 11 7 4.2720 -0.0066 -0.0004 12 6 3.6266 -1.1501 0.0003 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0017 15 8 0.3122 -2.5294 -0.1088 16 7 2.2207 -3.6411 0.1251 17 6 1.5213 -4.9284 0.1268 18 1 0.6663 -4.8783 -0.5474 19 6 2.4762 -6.0283 -0.3414 20 6 3.6763 -6.0988 0.6050 21 6 3.1909 -6.4136 2.0214 22 1 2.6705 -7.3714 2.0226 23 6 4.3910 -6.4835 2.9680 24 8 3.9515 -6.8915 4.2650 25 6 2.2361 -5.3138 2.4896 26 6 1.0360 -5.2433 1.5432 27 1 -0.3634 -0.1126 -1.0214 28 1 -0.3633 -0.8283 0.6084 29 1 -0.3633 0.9410 0.4132 30 1 -0.1545 2.6310 -0.7284 31 1 0.3698 3.4796 1.9983 32 1 -0.8662 5.5408 -0.4610 33 1 1.3582 5.7177 0.5090 34 1 3.0599 4.3906 -0.0019 35 1 4.9965 2.7372 -0.0105 36 1 4.1869 -2.0734 0.0000 37 1 3.1862 -3.6137 0.2136 38 1 1.9559 -6.9861 -0.3398 39 1 2.8219 -5.8039 -1.3506 40 1 4.3568 -6.8820 0.2711 41 1 4.1967 -5.1410 0.6038 42 1 5.1137 -7.2044 2.5858 43 1 4.8585 -5.5011 3.0350 44 1 4.6614 -6.9570 4.9183 45 1 1.8906 -5.5379 3.4989 46 1 2.7565 -4.3560 2.4884 47 1 0.3556 -4.4597 1.8768 48 1 0.5159 -6.2012 1.5445 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:43 Heat of formation + Delta-G solvation = -51.877417 kcal Electronic energy + Delta-G solvation = -31243.472880 eV Core-core repulsion = 27071.969343 eV Total energy + Delta-G solvation = -4171.503537 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.83597 -41.31099 -39.74483 -38.61236 -37.87285 -37.43923 -35.15372 -34.57574 -32.23245 -31.83548 -31.79785 -30.41173 -28.71780 -26.67033 -26.26997 -24.68246 -23.92567 -23.69300 -22.25659 -21.94451 -20.72247 -20.18823 -19.24906 -18.85288 -18.24613 -17.77963 -17.51446 -16.93412 -16.66606 -16.47842 -16.33877 -15.94402 -15.85887 -15.59167 -15.46411 -15.13324 -14.91232 -14.79823 -14.58432 -14.07304 -13.94751 -13.85993 -13.68153 -13.53682 -13.37716 -13.21235 -13.15550 -13.07306 -12.83842 -12.47545 -12.41637 -12.18185 -11.84508 -11.57559 -11.32599 -11.12807 -11.07387 -11.03055 -10.85742 -10.49380 -10.18244 -9.97971 -9.56329 -9.13509 -5.00460 -0.19783 -0.03882 1.23533 1.38439 1.50595 1.61385 1.93138 1.99456 2.19355 2.88861 3.16648 3.28959 3.38626 3.51730 3.59619 3.63215 3.70129 3.75481 3.82589 3.90085 4.01688 4.10640 4.20369 4.26458 4.29416 4.34663 4.42346 4.43793 4.49880 4.56470 4.59680 4.65312 4.68641 4.73108 4.79520 4.95283 4.99248 5.03293 5.07276 5.10338 5.11700 5.21671 5.29491 5.41187 5.43063 5.45515 5.53609 5.66356 5.80609 6.10263 6.44386 6.55802 6.66624 6.86799 7.33036 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.086 3.914 3 C -0.149 4.149 4 C -0.176 4.176 5 C -0.044 4.044 6 O -0.527 6.527 7 Si 0.686 3.314 8 C 0.067 3.933 9 N -0.570 5.570 10 C 0.307 3.693 11 N -0.504 5.504 12 C 0.180 3.820 13 C -0.233 4.233 14 C 0.571 3.429 15 O -0.529 6.529 16 N -0.721 5.721 17 C 0.147 3.853 18 H 0.092 0.908 19 C -0.127 4.127 20 C -0.115 4.115 21 C -0.089 4.089 22 H 0.080 0.920 23 C 0.078 3.922 24 O -0.573 6.573 25 C -0.108 4.108 26 C -0.132 4.132 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.082 0.918 30 H 0.119 0.881 31 H 0.375 0.625 32 H -0.254 1.254 33 H -0.258 1.258 34 H 0.183 0.817 35 H 0.425 0.575 36 H 0.160 0.840 37 H 0.396 0.604 38 H 0.082 0.918 39 H 0.073 0.927 40 H 0.070 0.930 41 H 0.061 0.939 42 H 0.045 0.955 43 H 0.044 0.956 44 H 0.380 0.620 45 H 0.070 0.930 46 H 0.059 0.941 47 H 0.070 0.930 48 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.466 1.535 -1.751 5.941 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.077 3.923 3 C -0.155 4.155 4 C -0.184 4.184 5 C -0.155 4.155 6 O -0.333 6.333 7 Si 0.586 3.414 8 C -0.060 4.060 9 N -0.176 5.176 10 C 0.074 3.926 11 N -0.217 5.217 12 C 0.011 3.989 13 C -0.240 4.240 14 C 0.359 3.641 15 O -0.407 6.407 16 N -0.374 5.374 17 C 0.043 3.957 18 H 0.110 0.890 19 C -0.164 4.164 20 C -0.153 4.153 21 C -0.107 4.107 22 H 0.098 0.902 23 C 0.001 3.999 24 O -0.378 6.378 25 C -0.146 4.146 26 C -0.170 4.170 27 H 0.100 0.900 28 H 0.116 0.884 29 H 0.101 0.899 30 H 0.137 0.863 31 H 0.222 0.778 32 H -0.178 1.178 33 H -0.183 1.183 34 H 0.200 0.800 35 H 0.264 0.736 36 H 0.177 0.823 37 H 0.232 0.768 38 H 0.101 0.899 39 H 0.092 0.908 40 H 0.089 0.911 41 H 0.079 0.921 42 H 0.063 0.937 43 H 0.062 0.938 44 H 0.227 0.773 45 H 0.089 0.911 46 H 0.077 0.923 47 H 0.088 0.912 48 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 4.419 2.131 -2.226 5.387 hybrid contribution 1.064 -0.138 1.508 1.851 sum 5.483 1.993 -0.718 5.878 Atomic orbital electron populations 1.21270 0.88778 1.04951 1.03893 1.19926 0.97185 0.89126 0.86047 1.19471 0.92761 0.93514 1.09803 1.20616 0.95206 0.91051 1.11514 1.24417 0.90950 1.11833 0.88258 1.86622 1.54359 1.75864 1.16449 0.95125 0.82675 0.73564 0.89996 1.21794 0.85124 0.95947 1.03107 1.41508 1.09566 1.02718 1.63761 1.18492 0.89369 0.85864 0.98890 1.66431 1.40576 0.96008 1.18713 1.22475 0.90150 0.94358 0.91927 1.20468 0.94711 0.93923 1.14898 1.17859 0.86872 0.83278 0.76077 1.90756 1.13487 1.86967 1.49447 1.46017 1.10599 1.05675 1.75122 1.20972 0.95491 0.81748 0.97506 0.89020 1.21822 0.96391 0.99014 0.99209 1.21527 0.97800 1.01866 0.94080 1.21185 0.95810 1.00446 0.93280 0.90161 1.22239 0.95997 0.98124 0.83571 1.86480 1.38944 1.91388 1.21004 1.21480 0.95795 0.97892 0.99436 1.21943 0.98062 1.02444 0.94572 0.89953 0.88360 0.89915 0.86334 0.77784 1.17824 1.18275 0.79984 0.73636 0.82311 0.76785 0.89921 0.90799 0.91086 0.92057 0.93668 0.93751 0.77319 0.91127 0.92255 0.91156 0.90844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.43 8.46 36.00 0.30 -0.12 16 2 C 0.09 0.28 5.98 -103.67 -0.62 -0.34 16 3 C -0.15 -0.38 6.16 -105.13 -0.65 -1.03 16 4 C -0.18 -0.03 5.57 -102.73 -0.57 -0.60 16 5 C -0.04 0.02 1.88 36.01 0.07 0.09 16 6 O -0.53 -0.48 11.66 -35.23 -0.41 -0.90 16 7 Si 0.69 -1.45 30.83 -169.99 -5.24 -6.69 16 8 C 0.07 -0.12 10.44 -16.69 -0.17 -0.30 16 9 N -0.57 0.49 6.04 -12.12 -0.07 0.42 16 10 C 0.31 0.70 8.42 -155.71 -1.31 -0.62 16 11 N -0.50 -1.32 10.37 -11.96 -0.12 -1.44 16 12 C 0.18 0.21 10.67 -17.11 -0.18 0.03 16 13 C -0.23 -0.58 5.89 -104.82 -0.62 -1.19 16 14 C 0.57 1.54 7.68 -12.41 -0.10 1.44 16 15 O -0.53 -2.95 13.16 5.30 0.07 -2.88 16 16 N -0.72 0.13 4.18 -54.80 -0.23 -0.10 16 17 C 0.15 -0.03 2.78 -67.93 -0.19 -0.22 16 18 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 19 C -0.13 0.27 5.61 -26.73 -0.15 0.12 16 20 C -0.12 0.29 5.03 -26.73 -0.13 0.16 16 21 C -0.09 0.08 2.43 -90.62 -0.22 -0.14 16 22 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 23 C 0.08 -0.07 6.43 37.16 0.24 0.16 16 24 O -0.57 -0.37 13.19 -35.23 -0.46 -0.83 16 25 C -0.11 -0.03 4.94 -26.73 -0.13 -0.16 16 26 C -0.13 -0.07 5.60 -26.73 -0.15 -0.22 16 27 H 0.08 0.24 8.14 -51.93 -0.42 -0.18 16 28 H 0.10 0.47 5.95 -51.92 -0.31 0.16 16 29 H 0.08 0.24 4.79 -51.93 -0.25 0.00 16 30 H 0.12 -0.05 7.13 -51.92 -0.37 -0.43 16 31 H 0.37 -0.73 8.70 45.56 0.40 -0.34 16 32 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 33 H -0.26 0.28 7.00 56.52 0.40 0.67 16 34 H 0.18 -0.91 6.28 -52.49 -0.33 -1.24 16 35 H 0.43 -1.44 8.96 -40.82 -0.37 -1.80 16 36 H 0.16 -0.35 6.43 -52.49 -0.34 -0.69 16 37 H 0.40 -0.91 4.94 -40.82 -0.20 -1.11 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 -0.18 8.14 -51.92 -0.42 -0.61 16 40 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 41 H 0.06 -0.21 6.51 -51.93 -0.34 -0.54 16 42 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 43 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 44 H 0.38 -1.27 9.12 45.56 0.42 -0.85 16 45 H 0.07 0.14 7.82 -51.93 -0.41 -0.27 16 46 H 0.06 0.03 7.60 -51.93 -0.39 -0.37 16 47 H 0.07 0.18 8.14 -51.93 -0.42 -0.24 16 48 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 372.60 15.07 5.62 5.62 Total: 0.00 -9.59 372.60 -11.33 -20.93 By element: Atomic # 1 Polarization: -5.29 SS G_CDS: -5.89 Total: -11.19 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -4.58 Total: -2.93 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.43 Total: -1.12 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.81 Total: -4.61 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.24 Total: -6.69 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -9.59 -11.33 -20.93 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.950 kcal (2) G-P(sol) polarization free energy of solvation -9.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.334 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.928 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds