Wall clock time and date at job start Mon Mar 8 2021 02:32:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.39287 * 121.03268 * 2 1 4 4 C 1.46502 * 134.20164 * 359.95348 * 3 2 1 5 5 C 1.50700 * 126.59781 * 0.02933 * 4 3 2 6 6 O 1.42897 * 109.47761 * 74.96669 * 5 4 3 7 7 Si 1.86299 * 109.47125 * 194.97361 * 5 4 3 8 8 C 1.34173 * 106.80608 * 180.02562 * 4 3 2 9 9 N 1.36958 * 109.94744 * 0.24654 * 8 4 3 10 10 C 1.37153 * 110.11116 * 359.58677 * 9 8 4 11 11 N 1.32826 * 132.95820 * 180.02562 * 10 9 8 12 12 C 1.31304 * 121.88565 * 180.32062 * 11 10 9 13 13 C 1.39748 * 121.03017 * 179.97438 * 2 1 3 14 14 C 1.47660 * 120.45704 * 359.97438 * 13 2 1 15 15 O 1.21579 * 119.99733 * 6.05001 * 14 13 2 16 16 N 1.34775 * 120.00228 * 186.04571 * 14 13 2 17 17 C 1.46500 * 119.99765 * 179.97438 * 16 14 13 18 18 H 1.09001 * 109.47541 * 35.00288 * 17 16 14 19 19 C 1.53005 * 109.47097 * 155.00191 * 17 16 14 20 20 C 1.53001 * 109.47176 * 59.99776 * 19 17 16 21 21 C 1.53002 * 109.46561 * 60.00184 * 20 19 17 22 22 H 1.08999 * 109.47430 * 60.00272 * 21 20 19 23 23 C 1.53007 * 109.46832 * 180.02562 * 21 20 19 24 24 O 1.42900 * 109.47273 * 185.00302 * 23 21 20 25 25 C 1.52993 * 109.47468 * 299.99722 * 21 20 19 26 26 C 1.53000 * 109.47279 * 275.00091 * 17 16 14 27 27 H 1.08993 * 109.47561 * 96.29171 * 1 2 3 28 28 H 1.09008 * 109.47033 * 216.29919 * 1 2 3 29 29 H 1.09005 * 109.47104 * 336.29495 * 1 2 3 30 30 H 1.09012 * 109.46800 * 314.97034 * 5 4 3 31 31 H 0.96706 * 113.99756 * 60.00120 * 6 5 4 32 32 H 1.48505 * 109.99981 * 179.97438 * 7 5 4 33 33 H 1.48496 * 109.99756 * 301.31314 * 7 5 4 34 34 H 1.07994 * 125.02690 * 179.97438 * 8 4 3 35 35 H 0.96993 * 124.94034 * 179.72433 * 9 8 4 36 36 H 1.08002 * 119.31028 * 180.02562 * 12 11 10 37 37 H 0.96992 * 119.99787 * 0.02562 * 16 14 13 38 38 H 1.08999 * 109.47313 * 179.97438 * 19 17 16 39 39 H 1.09008 * 109.46851 * 300.00217 * 19 17 16 40 40 H 1.08995 * 109.47087 * 180.02562 * 20 19 17 41 41 H 1.09001 * 109.47319 * 300.00663 * 20 19 17 42 42 H 1.08995 * 109.46874 * 305.00183 * 23 21 20 43 43 H 1.09004 * 109.47213 * 64.99678 * 23 21 20 44 44 H 0.96697 * 114.00293 * 180.02562 * 24 23 21 45 45 H 1.09004 * 109.47472 * 180.02562 * 25 21 20 46 46 H 1.09001 * 109.47468 * 300.00168 * 25 21 20 47 47 H 1.09002 * 109.47194 * 60.00444 * 26 17 16 48 48 H 1.09001 * 109.46810 * 180.02562 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8517 2.6102 -0.0009 5 6 0.4527 3.1706 -0.0014 6 8 -0.1198 3.0241 1.2996 7 14 0.5074 4.9764 -0.4562 8 6 2.9948 3.3126 -0.0009 9 7 4.0669 2.4604 -0.0057 10 6 3.6347 1.1588 0.0003 11 7 4.2720 -0.0066 -0.0004 12 6 3.6266 -1.1501 0.0003 13 6 2.2274 -1.1975 0.0005 14 6 1.5225 -2.4950 0.0017 15 8 0.3122 -2.5294 -0.1088 16 7 2.2207 -3.6411 0.1251 17 6 1.5213 -4.9284 0.1268 18 1 0.6663 -4.8783 -0.5474 19 6 2.4762 -6.0283 -0.3414 20 6 3.6763 -6.0988 0.6050 21 6 3.1909 -6.4136 2.0214 22 1 2.6705 -7.3714 2.0226 23 6 4.3910 -6.4835 2.9680 24 8 3.9515 -6.8915 4.2650 25 6 2.2361 -5.3138 2.4896 26 6 1.0360 -5.2433 1.5432 27 1 -0.3634 -0.1126 -1.0214 28 1 -0.3633 -0.8283 0.6084 29 1 -0.3633 0.9410 0.4132 30 1 -0.1545 2.6310 -0.7284 31 1 0.3698 3.4796 1.9983 32 1 -0.8662 5.5408 -0.4610 33 1 1.3582 5.7177 0.5090 34 1 3.0599 4.3906 -0.0019 35 1 4.9965 2.7372 -0.0105 36 1 4.1869 -2.0734 0.0000 37 1 3.1862 -3.6137 0.2136 38 1 1.9559 -6.9861 -0.3398 39 1 2.8219 -5.8039 -1.3506 40 1 4.3568 -6.8820 0.2711 41 1 4.1967 -5.1410 0.6038 42 1 5.1137 -7.2044 2.5858 43 1 4.8585 -5.5011 3.0350 44 1 4.6614 -6.9570 4.9183 45 1 1.8906 -5.5379 3.4989 46 1 2.7565 -4.3560 2.4884 47 1 0.3556 -4.4597 1.8768 48 1 0.5159 -6.2012 1.5445 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:32:42 Heat of formation + Delta-G solvation = -54.247029 kcal Electronic energy + Delta-G solvation = -31243.575634 eV Core-core repulsion = 27071.969343 eV Total energy + Delta-G solvation = -4171.606291 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.173 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.87046 -41.40581 -39.77895 -38.68901 -37.87604 -37.45201 -35.24888 -34.70308 -32.28205 -31.84605 -31.76771 -30.44621 -28.88367 -26.64512 -26.23858 -24.76460 -24.00175 -23.65386 -22.28122 -21.98971 -20.70751 -20.22487 -19.31862 -18.90224 -18.20071 -17.79542 -17.53905 -16.98880 -16.73803 -16.50321 -16.36544 -16.01898 -15.87202 -15.60415 -15.44311 -15.13555 -15.00901 -14.77731 -14.56935 -14.10117 -14.05879 -13.91616 -13.74620 -13.63700 -13.42749 -13.26622 -13.22229 -13.11509 -12.91517 -12.46741 -12.40930 -12.12067 -11.81357 -11.54745 -11.30826 -11.21047 -11.15759 -11.08504 -10.80067 -10.59156 -10.28229 -10.10917 -9.62733 -9.14003 -4.83849 -0.35042 -0.09363 1.35301 1.41461 1.62379 1.67667 1.81073 2.05063 2.10193 2.75444 3.29669 3.32090 3.43897 3.53247 3.62232 3.66854 3.69929 3.74180 3.77680 3.92626 4.06898 4.13242 4.25127 4.28291 4.32565 4.42944 4.44672 4.49139 4.51164 4.52623 4.58985 4.67586 4.68970 4.74609 4.77470 4.77785 4.98928 5.02863 5.07629 5.12176 5.16926 5.18200 5.23667 5.27615 5.37741 5.42127 5.45962 5.56282 5.72670 6.21006 6.48990 6.59028 6.81642 6.89970 7.18876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 C 0.062 3.938 3 C -0.165 4.165 4 C -0.197 4.197 5 C -0.060 4.060 6 O -0.550 6.550 7 Si 0.782 3.218 8 C 0.091 3.909 9 N -0.559 5.559 10 C 0.289 3.711 11 N -0.514 5.514 12 C 0.179 3.821 13 C -0.241 4.241 14 C 0.569 3.431 15 O -0.566 6.566 16 N -0.705 5.705 17 C 0.149 3.851 18 H 0.074 0.926 19 C -0.120 4.120 20 C -0.111 4.111 21 C -0.087 4.087 22 H 0.069 0.931 23 C 0.075 3.925 24 O -0.598 6.598 25 C -0.102 4.102 26 C -0.128 4.128 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.081 0.919 30 H 0.109 0.891 31 H 0.385 0.615 32 H -0.309 1.309 33 H -0.258 1.258 34 H 0.221 0.779 35 H 0.438 0.562 36 H 0.191 0.809 37 H 0.409 0.591 38 H 0.086 0.914 39 H 0.084 0.916 40 H 0.085 0.915 41 H 0.074 0.926 42 H 0.058 0.942 43 H 0.053 0.947 44 H 0.394 0.606 45 H 0.049 0.951 46 H 0.059 0.941 47 H 0.043 0.957 48 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.117 2.310 -2.296 8.747 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.054 3.946 3 C -0.173 4.173 4 C -0.204 4.204 5 C -0.168 4.168 6 O -0.359 6.359 7 Si 0.684 3.316 8 C -0.036 4.036 9 N -0.166 5.166 10 C 0.055 3.945 11 N -0.228 5.228 12 C 0.011 3.989 13 C -0.248 4.248 14 C 0.357 3.643 15 O -0.446 6.446 16 N -0.358 5.358 17 C 0.044 3.956 18 H 0.092 0.908 19 C -0.157 4.157 20 C -0.148 4.148 21 C -0.105 4.105 22 H 0.088 0.912 23 C -0.002 4.002 24 O -0.406 6.406 25 C -0.140 4.140 26 C -0.167 4.167 27 H 0.096 0.904 28 H 0.096 0.904 29 H 0.100 0.900 30 H 0.127 0.873 31 H 0.234 0.766 32 H -0.237 1.237 33 H -0.183 1.183 34 H 0.237 0.763 35 H 0.280 0.720 36 H 0.208 0.792 37 H 0.247 0.753 38 H 0.105 0.895 39 H 0.103 0.897 40 H 0.104 0.896 41 H 0.093 0.907 42 H 0.076 0.924 43 H 0.071 0.929 44 H 0.244 0.756 45 H 0.068 0.932 46 H 0.078 0.922 47 H 0.062 0.938 48 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 7.152 2.873 -2.755 8.185 hybrid contribution 0.179 -0.377 1.721 1.771 sum 7.331 2.496 -1.034 7.813 Atomic orbital electron populations 1.21082 0.89547 1.03904 1.03162 1.20052 0.96987 0.90208 0.87388 1.19754 0.93282 0.94383 1.09833 1.20709 0.96128 0.90221 1.13330 1.24765 0.90582 1.13911 0.87540 1.86588 1.55161 1.76637 1.17483 0.94067 0.79225 0.69996 0.88291 1.22334 0.83967 0.97216 1.00049 1.41597 1.10603 1.01686 1.62730 1.18762 0.89486 0.86851 0.99417 1.66510 1.40781 0.96430 1.19034 1.22908 0.89655 0.95259 0.91092 1.20536 0.95477 0.93444 1.15356 1.18017 0.86500 0.84061 0.75704 1.90740 1.15077 1.87479 1.51333 1.45892 1.11128 1.04972 1.73831 1.20953 0.95744 0.82358 0.96495 0.90785 1.21793 0.96070 0.98086 0.99800 1.21525 0.97678 1.03106 0.92513 1.21173 0.95607 0.99161 0.94578 0.91220 1.22338 0.95963 0.98970 0.82956 1.86443 1.40533 1.91551 1.22102 1.21392 0.95867 0.98519 0.98176 1.21883 0.97896 1.01612 0.95281 0.90430 0.90383 0.89993 0.87343 0.76564 1.23692 1.18316 0.76255 0.72029 0.79208 0.75279 0.89518 0.89693 0.89640 0.90741 0.92352 0.92884 0.75620 0.93184 0.92242 0.93811 0.90571 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.16 8.46 71.24 0.60 -0.56 16 2 C 0.06 0.54 5.98 -19.25 -0.12 0.42 16 3 C -0.17 -0.99 6.16 -20.19 -0.12 -1.12 16 4 C -0.20 -0.04 5.57 -18.64 -0.10 -0.15 16 5 C -0.06 0.02 1.88 71.24 0.13 0.16 16 6 O -0.55 -1.70 11.66 -148.98 -1.74 -3.43 16 7 Si 0.78 -3.94 30.83 68.60 2.11 -1.83 16 8 C 0.09 -0.51 10.44 82.96 0.87 0.36 16 9 N -0.56 1.80 6.04 -192.26 -1.16 0.64 16 10 C 0.29 1.23 8.42 134.02 1.13 2.36 16 11 N -0.51 -2.52 10.37 -191.75 -1.99 -4.50 16 12 C 0.18 0.42 10.67 85.20 0.91 1.33 16 13 C -0.24 -1.54 5.89 -20.00 -0.12 -1.66 16 14 C 0.57 4.15 7.68 86.73 0.67 4.82 16 15 O -0.57 -8.11 13.16 -3.97 -0.05 -8.16 16 16 N -0.71 -0.22 4.18 -445.57 -1.86 -2.09 16 17 C 0.15 0.09 2.78 44.99 0.13 0.21 16 18 H 0.07 0.34 7.58 -2.39 -0.02 0.32 16 19 C -0.12 0.60 5.61 30.60 0.17 0.77 16 20 C -0.11 0.73 5.03 30.60 0.15 0.88 16 21 C -0.09 0.17 2.43 -10.79 -0.03 0.15 16 22 H 0.07 0.03 8.14 -2.39 -0.02 0.01 16 23 C 0.08 -0.20 6.43 71.98 0.46 0.26 16 24 O -0.60 -0.83 13.19 -148.98 -1.97 -2.80 16 25 C -0.10 -0.17 4.94 30.59 0.15 -0.02 16 26 C -0.13 -0.38 5.60 30.59 0.17 -0.21 16 27 H 0.08 0.73 8.14 -2.39 -0.02 0.71 16 28 H 0.08 1.06 5.95 -2.38 -0.01 1.04 16 29 H 0.08 0.74 4.79 -2.38 -0.01 0.73 16 30 H 0.11 0.10 7.13 -2.38 -0.02 0.08 16 31 H 0.39 -1.28 8.70 -74.05 -0.64 -1.92 16 32 H -0.31 -1.31 7.11 99.48 0.71 -0.60 16 33 H -0.26 1.26 7.00 99.48 0.70 1.96 16 34 H 0.22 -2.99 6.28 -2.91 -0.02 -3.01 16 35 H 0.44 -3.85 8.96 -92.71 -0.83 -4.68 16 36 H 0.19 -1.08 6.43 -2.91 -0.02 -1.10 16 37 H 0.41 -2.14 4.94 -92.71 -0.46 -2.60 16 38 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.08 -0.55 8.14 -2.38 -0.02 -0.57 16 40 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 41 H 0.07 -0.67 6.51 -2.39 -0.02 -0.68 16 42 H 0.06 -0.30 8.14 -2.39 -0.02 -0.32 16 43 H 0.05 -0.24 8.14 -2.38 -0.02 -0.25 16 44 H 0.39 -2.64 9.12 -74.06 -0.68 -3.32 16 45 H 0.05 0.30 7.82 -2.39 -0.02 0.28 16 46 H 0.06 0.09 7.60 -2.39 -0.02 0.07 16 47 H 0.04 0.36 8.14 -2.39 -0.02 0.34 16 48 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 Total: 0.00 -25.61 372.60 -3.13 -28.74 By element: Atomic # 1 Polarization: -13.05 SS G_CDS: -1.53 Total: -14.58 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: 5.05 Total: 8.01 kcal Atomic # 7 Polarization: -0.94 SS G_CDS: -5.01 Total: -5.95 kcal Atomic # 8 Polarization: -10.64 SS G_CDS: -3.76 Total: -14.39 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.11 Total: -1.83 kcal Total: -25.61 -3.13 -28.74 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.512 kcal (2) G-P(sol) polarization free energy of solvation -25.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.117 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.130 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.735 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds