Wall clock time and date at job start Mon Mar 8 2021 02:33:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.47293 * 2 1 4 4 C 1.50707 * 109.46683 * 240.00219 * 2 1 3 5 5 C 1.38583 * 120.32256 * 299.99529 * 4 2 1 6 6 C 1.38631 * 118.48748 * 180.02562 * 5 4 2 7 7 C 1.39272 * 119.06156 * 0.02562 * 6 5 4 8 8 C 1.48166 * 119.72272 * 180.02562 * 7 6 5 9 9 O 1.21510 * 120.00213 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99934 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00037 * 180.02562 * 10 8 7 12 12 H 1.09001 * 109.47054 * 324.99327 * 11 10 8 13 13 C 1.52997 * 109.47294 * 84.99596 * 11 10 8 14 14 C 1.53002 * 109.46817 * 60.00190 * 13 11 10 15 15 C 1.53000 * 109.47233 * 60.00194 * 14 13 11 16 16 H 1.09002 * 109.47398 * 59.99826 * 15 14 13 17 17 C 1.53002 * 109.47233 * 179.97438 * 15 14 13 18 18 O 1.42898 * 109.46622 * 294.99785 * 17 15 14 19 19 C 1.52997 * 109.47060 * 299.99657 * 15 14 13 20 20 C 1.52999 * 109.47317 * 59.99960 * 19 15 14 21 21 N 1.32743 * 120.55363 * 0.27048 * 7 6 5 22 22 C 1.31497 * 121.64223 * 359.44051 * 21 7 6 23 23 H 0.96702 * 114.00001 * 300.00502 * 1 2 3 24 24 H 1.09000 * 109.47061 * 120.00612 * 2 1 3 25 25 H 1.48501 * 109.99971 * 300.00067 * 3 2 1 26 26 H 1.48495 * 109.99594 * 61.32062 * 3 2 1 27 27 H 1.07999 * 120.75544 * 0.05573 * 5 4 2 28 28 H 1.08006 * 120.47052 * 180.02562 * 6 5 4 29 29 H 0.97010 * 119.99810 * 359.97438 * 10 8 7 30 30 H 1.09002 * 109.46695 * 179.97438 * 13 11 10 31 31 H 1.08993 * 109.47194 * 299.99671 * 13 11 10 32 32 H 1.08992 * 109.47063 * 299.99823 * 14 13 11 33 33 H 1.09004 * 109.46733 * 179.97438 * 14 13 11 34 34 H 1.09000 * 109.47059 * 54.99596 * 17 15 14 35 35 H 1.08996 * 109.47073 * 174.99688 * 17 15 14 36 36 H 0.96707 * 114.00049 * 179.97438 * 18 17 15 37 37 H 1.08996 * 109.47853 * 180.02562 * 19 15 14 38 38 H 1.09002 * 109.47153 * 300.00319 * 19 15 14 39 39 H 1.09002 * 109.46716 * 60.00091 * 20 19 15 40 40 H 1.09000 * 109.47486 * 180.02562 * 20 19 15 41 41 H 1.08001 * 119.55546 * 180.26346 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.6006 -2.0371 -1.4565 6 6 2.0837 -2.6534 -2.6004 7 6 2.8807 -1.9221 -3.4777 8 6 3.4044 -2.5661 -4.7050 9 8 3.1386 -3.7277 -4.9425 10 7 4.1766 -1.8637 -5.5576 11 6 4.6940 -2.5002 -6.7714 12 1 4.9181 -3.5469 -6.5654 13 6 3.6440 -2.4122 -7.8807 14 6 3.3295 -0.9430 -8.1698 15 6 4.6053 -0.2268 -8.6171 16 1 4.9903 -0.7004 -9.5202 17 6 4.2907 1.2423 -8.9068 18 8 3.3989 1.3277 -10.0201 19 6 5.6553 -0.3148 -7.5078 20 6 5.9698 -1.7839 -7.2187 21 7 3.1789 -0.6543 -3.2211 22 6 2.7297 -0.0438 -2.1466 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5139 0.8899 25 1 1.5615 2.4679 -1.2085 26 1 1.5880 2.4584 1.2242 27 1 0.9802 -2.5784 -0.7576 28 1 1.8455 -3.6862 -2.8084 29 1 4.3891 -0.9364 -5.3679 30 1 4.0292 -2.8855 -8.7839 31 1 2.7351 -2.9225 -7.5621 32 1 2.9445 -0.4694 -7.2667 33 1 2.5817 -0.8803 -8.9604 34 1 3.8232 1.6932 -8.0314 35 1 5.2141 1.7726 -9.1393 36 1 3.1553 2.2323 -10.2604 37 1 6.5641 0.1958 -7.8262 38 1 5.2703 0.1588 -6.6047 39 1 6.3548 -2.2575 -8.1218 40 1 6.7176 -1.8467 -6.4280 41 1 2.9899 0.9900 -1.9732 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13287726.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:05 Heat of formation + Delta-G solvation = -87.142028 kcal Electronic energy + Delta-G solvation = -23792.214804 eV Core-core repulsion = 20252.135509 eV Total energy + Delta-G solvation = -3540.079296 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.146 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.87137 -40.82542 -39.29193 -38.04860 -37.43250 -34.83613 -33.85888 -32.99720 -31.80329 -31.41789 -27.90873 -26.31048 -24.98199 -23.93048 -23.64673 -22.25863 -21.88932 -20.11356 -19.36510 -18.77422 -18.23789 -18.02409 -16.99186 -16.70164 -16.59259 -16.22075 -15.99471 -15.72064 -15.61149 -15.16591 -15.09392 -14.69853 -14.41948 -14.28105 -14.05167 -14.00118 -13.88092 -13.41636 -13.18036 -13.00587 -12.60115 -12.45356 -12.15559 -12.13541 -11.55466 -11.30765 -11.25343 -11.10966 -11.07095 -10.83451 -10.76551 -10.57022 -10.24285 -9.92267 -5.13715 -0.51540 0.10608 1.06053 1.43674 1.70690 1.80031 2.10501 2.70448 2.96451 3.14901 3.20035 3.53398 3.64021 3.71263 3.73330 3.76902 3.91387 3.91605 4.04661 4.21329 4.21996 4.25387 4.37351 4.44968 4.46093 4.53136 4.56388 4.62190 4.68038 4.76326 4.87617 4.97818 4.99497 5.07316 5.11447 5.12993 5.30411 5.39286 5.43872 5.45938 5.59304 6.22815 6.40680 6.69201 6.69863 7.23561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.076 4.076 3 Si 0.681 3.319 4 C -0.104 4.104 5 C -0.052 4.052 6 C -0.108 4.108 7 C 0.080 3.920 8 C 0.573 3.427 9 O -0.530 6.530 10 N -0.702 5.702 11 C 0.143 3.857 12 H 0.092 0.908 13 C -0.132 4.132 14 C -0.109 4.109 15 C -0.088 4.088 16 H 0.079 0.921 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.116 4.116 20 C -0.125 4.125 21 N -0.453 5.453 22 C 0.106 3.894 23 H 0.384 0.616 24 H 0.084 0.916 25 H -0.250 1.250 26 H -0.255 1.255 27 H 0.146 0.854 28 H 0.153 0.847 29 H 0.410 0.590 30 H 0.074 0.926 31 H 0.069 0.931 32 H 0.060 0.940 33 H 0.070 0.930 34 H 0.045 0.955 35 H 0.045 0.955 36 H 0.380 0.620 37 H 0.070 0.930 38 H 0.064 0.936 39 H 0.083 0.917 40 H 0.074 0.926 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.152 4.017 3.442 6.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.186 4.186 3 Si 0.581 3.419 4 C -0.106 4.106 5 C -0.078 4.078 6 C -0.129 4.129 7 C -0.058 4.058 8 C 0.357 3.643 9 O -0.405 6.405 10 N -0.355 5.355 11 C 0.039 3.961 12 H 0.110 0.890 13 C -0.170 4.170 14 C -0.147 4.147 15 C -0.106 4.106 16 H 0.098 0.902 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.154 4.154 20 C -0.163 4.163 21 N -0.164 5.164 22 C -0.054 4.054 23 H 0.233 0.767 24 H 0.102 0.898 25 H -0.174 1.174 26 H -0.180 1.180 27 H 0.164 0.836 28 H 0.170 0.830 29 H 0.247 0.753 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.079 0.921 33 H 0.089 0.911 34 H 0.063 0.937 35 H 0.063 0.937 36 H 0.227 0.773 37 H 0.089 0.911 38 H 0.083 0.917 39 H 0.101 0.899 40 H 0.092 0.908 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 3.461 3.473 2.095 5.332 hybrid contribution -1.668 0.547 1.336 2.206 sum 1.793 4.020 3.432 5.581 Atomic orbital electron populations 1.86579 1.17292 1.80287 1.50087 1.24731 0.84899 1.11300 0.97627 0.95132 0.91443 0.74195 0.81090 1.20530 0.98369 0.95120 0.96565 1.21523 0.96105 0.93747 0.96429 1.22212 0.95293 1.02116 0.93242 1.21197 0.97904 0.90708 0.96019 1.17839 0.78691 0.85631 0.82133 1.90809 1.58373 1.16147 1.75212 1.45961 1.50855 1.16313 1.22361 1.21052 0.93272 0.98034 0.83767 0.89037 1.21944 0.99568 0.97220 0.98290 1.21487 0.97114 0.94741 1.01329 1.21175 0.96106 0.94477 0.98887 0.90213 1.22236 0.92387 0.96832 0.88466 1.86479 1.67439 1.32905 1.51020 1.21533 0.98800 0.96696 0.98353 1.21807 0.96454 0.95606 1.02436 1.67528 1.20607 1.09128 1.19105 1.22536 0.94356 0.99520 0.88971 0.76710 0.89769 1.17428 1.17990 0.83610 0.82958 0.75269 0.90707 0.91229 0.92149 0.91121 0.93686 0.93650 0.77350 0.91088 0.91708 0.89892 0.90771 0.81937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.20 12.75 -35.23 -0.45 -0.25 16 2 C -0.08 0.13 2.82 36.01 0.10 0.23 16 3 Si 0.68 -1.71 29.82 -169.99 -5.07 -6.78 16 4 C -0.10 -0.01 5.44 -104.36 -0.57 -0.58 16 5 C -0.05 -0.02 9.76 -39.31 -0.38 -0.41 16 6 C -0.11 -0.18 9.63 -39.05 -0.38 -0.56 16 7 C 0.08 0.20 6.75 -83.01 -0.56 -0.36 16 8 C 0.57 1.99 7.78 -12.18 -0.09 1.89 16 9 O -0.53 -3.32 15.98 5.36 0.09 -3.23 16 10 N -0.70 -0.78 4.22 -54.65 -0.23 -1.01 16 11 C 0.14 0.07 2.78 -67.93 -0.19 -0.12 16 12 H 0.09 0.16 7.58 -51.93 -0.39 -0.24 16 13 C -0.13 -0.14 5.60 -26.73 -0.15 -0.29 16 14 C -0.11 -0.10 4.94 -26.73 -0.13 -0.24 16 15 C -0.09 0.03 2.43 -90.62 -0.22 -0.19 16 16 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 17 C 0.08 -0.03 6.43 37.16 0.24 0.21 16 18 O -0.57 -0.58 13.19 -35.23 -0.46 -1.04 16 19 C -0.12 0.21 5.03 -26.73 -0.13 0.07 16 20 C -0.13 0.19 5.61 -26.73 -0.15 0.04 16 21 N -0.45 -0.73 9.54 -9.80 -0.09 -0.82 16 22 C 0.11 0.02 9.84 -17.56 -0.17 -0.15 16 23 H 0.38 -1.66 8.74 45.56 0.40 -1.26 16 24 H 0.08 -0.30 7.96 -51.93 -0.41 -0.72 16 25 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 26 H -0.26 0.11 7.11 56.52 0.40 0.52 16 27 H 0.15 -0.17 8.06 -52.49 -0.42 -0.59 16 28 H 0.15 0.19 7.64 -52.48 -0.40 -0.21 16 29 H 0.41 -0.01 6.20 -40.82 -0.25 -0.27 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 0.21 8.14 -51.93 -0.42 -0.22 16 32 H 0.06 0.09 7.60 -51.93 -0.39 -0.30 16 33 H 0.07 0.17 7.82 -51.93 -0.41 -0.23 16 34 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 35 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 36 H 0.38 -1.14 9.12 45.56 0.42 -0.72 16 37 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 38 H 0.06 -0.13 6.51 -51.93 -0.34 -0.47 16 39 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 40 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 41 H 0.16 -0.38 4.89 -52.49 -0.26 -0.63 16 LS Contribution 331.83 15.07 5.00 5.00 Total: 0.00 -8.09 331.83 -9.06 -17.14 By element: Atomic # 1 Polarization: -3.52 SS G_CDS: -5.04 Total: -8.57 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -2.79 Total: -0.44 kcal Atomic # 7 Polarization: -1.51 SS G_CDS: -0.32 Total: -1.83 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -0.83 Total: -4.52 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.07 Total: -6.78 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -8.09 -9.06 -17.14 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13287726.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.001 kcal (2) G-P(sol) polarization free energy of solvation -8.086 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.087 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.141 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.142 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds