Wall clock time and date at job start Mon Mar 8 2021 02:33:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38973 * 119.95580 * 2 1 4 4 O 1.35709 * 119.91174 * 0.03910 * 3 2 1 5 5 C 1.39021 * 120.17708 * 180.02562 * 3 2 1 6 6 C 1.50698 * 119.95272 * 179.97438 * 5 3 2 7 7 O 1.42900 * 109.47196 * 75.00309 * 6 5 3 8 8 Si 1.86304 * 109.46991 * 194.99742 * 6 5 3 9 9 C 1.37680 * 120.08722 * 0.02562 * 5 3 2 10 10 C 1.39754 * 119.90905 * 359.68218 * 9 5 3 11 11 C 1.47606 * 120.08630 * 180.31893 * 10 9 5 12 12 O 1.21583 * 119.99901 * 0.27457 * 11 10 9 13 13 N 1.34771 * 119.99905 * 180.28056 * 11 10 9 14 14 C 1.46503 * 120.00001 * 179.97438 * 13 11 10 15 15 H 1.08999 * 109.47091 * 324.99738 * 14 13 11 16 16 C 1.53003 * 109.46977 * 84.99292 * 14 13 11 17 17 C 1.53006 * 109.47006 * 60.00591 * 16 14 13 18 18 C 1.53000 * 109.47250 * 59.99350 * 17 16 14 19 19 H 1.09003 * 109.46760 * 60.00476 * 18 17 16 20 20 C 1.53001 * 109.46955 * 180.02562 * 18 17 16 21 21 O 1.42903 * 109.47072 * 295.00084 * 20 18 17 22 22 C 1.52991 * 109.47226 * 300.00494 * 18 17 16 23 23 C 1.52995 * 109.47495 * 204.99545 * 14 13 11 24 24 C 1.37726 * 119.95713 * 180.02562 * 2 1 3 25 25 H 1.09005 * 109.47594 * 269.98141 * 1 2 3 26 26 H 1.08999 * 109.47434 * 29.98428 * 1 2 3 27 27 H 1.09001 * 109.47343 * 149.97952 * 1 2 3 28 28 H 0.96699 * 114.00339 * 90.00441 * 4 3 2 29 29 H 1.09002 * 109.47796 * 314.99878 * 6 5 3 30 30 H 0.96700 * 114.00520 * 180.02562 * 7 6 5 31 31 H 1.48503 * 110.00160 * 178.68308 * 8 6 5 32 32 H 1.48501 * 109.99927 * 300.00346 * 8 6 5 33 33 H 1.07998 * 120.03941 * 179.97438 * 9 5 3 34 34 H 0.96997 * 120.00334 * 359.97438 * 13 11 10 35 35 H 1.09003 * 109.47219 * 180.02562 * 16 14 13 36 36 H 1.09002 * 109.47633 * 300.00441 * 16 14 13 37 37 H 1.09008 * 109.46482 * 299.99604 * 17 16 14 38 38 H 1.08998 * 109.47070 * 179.97438 * 17 16 14 39 39 H 1.08997 * 109.47295 * 55.00270 * 20 18 17 40 40 H 1.09001 * 109.46964 * 175.00044 * 20 18 17 41 41 H 0.96701 * 113.99687 * 179.97438 * 21 20 18 42 42 H 1.09003 * 109.47236 * 299.99690 * 22 18 17 43 43 H 1.09004 * 109.47370 * 180.02562 * 22 18 17 44 44 H 1.08998 * 109.46986 * 59.99832 * 23 14 13 45 45 H 1.08994 * 109.47417 * 180.02562 * 23 14 13 46 46 H 1.08002 * 120.04103 * 359.97438 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2009 1.2041 0.0000 4 8 1.5196 2.3778 0.0008 5 6 3.5911 1.2095 -0.0005 6 6 4.3384 2.5181 -0.0011 7 8 4.2724 3.1049 1.3002 8 14 6.1196 2.2157 -0.4563 9 6 4.2859 0.0208 -0.0016 10 6 3.5917 -1.1921 0.0046 11 6 4.3327 -2.4687 0.0106 12 8 5.5485 -2.4659 0.0152 13 7 3.6615 -3.6374 0.0108 14 6 4.3970 -4.9045 0.0162 15 1 5.3094 -4.7974 -0.5703 16 6 4.7568 -5.2791 1.4553 17 6 3.4760 -5.4295 2.2787 18 6 2.6034 -6.5282 1.6684 19 1 3.1506 -7.4709 1.6725 20 6 1.3223 -6.6780 2.4914 21 8 1.6502 -7.1404 3.8032 22 6 2.2437 -6.1535 0.2294 23 6 3.5245 -6.0032 -0.5939 24 6 2.1947 -1.1933 -0.0005 25 1 -0.3634 -0.0003 1.0277 26 1 -0.3634 0.8901 -0.5136 27 1 -0.3634 -0.8898 -0.5141 28 1 1.3227 2.7177 0.8844 29 1 3.8874 3.1939 -0.7278 30 1 4.7330 3.9520 1.3735 31 1 6.8603 3.5024 -0.4914 32 1 6.7459 1.2958 0.5269 33 1 5.3658 0.0259 -0.0024 34 1 2.6916 -3.6397 0.0074 35 1 5.3044 -6.2216 1.4593 36 1 5.3784 -4.4963 1.8901 37 1 2.9288 -4.4867 2.2746 38 1 3.7323 -5.6968 3.3038 39 1 0.8204 -5.7130 2.5613 40 1 0.6615 -7.3970 2.0073 41 1 0.8843 -7.2580 4.3816 42 1 1.6965 -5.2107 0.2254 43 1 1.6216 -6.9360 -0.2052 44 1 3.2681 -5.7363 -1.6192 45 1 4.0715 -6.9460 -0.5895 46 1 1.6546 -2.1286 -0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:10 Heat of formation + Delta-G solvation = -144.128913 kcal Electronic energy + Delta-G solvation = -28230.248121 eV Core-core repulsion = 24278.903789 eV Total energy + Delta-G solvation = -3951.344332 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.77096 -40.87660 -39.42877 -37.86982 -37.65241 -37.33300 -34.87305 -34.08155 -32.43930 -31.85282 -30.90708 -28.06954 -26.93510 -26.44885 -24.75426 -23.73015 -22.28207 -21.92113 -21.64688 -20.20611 -19.46257 -18.74807 -18.53856 -18.27429 -17.63909 -16.68957 -16.62007 -16.55935 -16.08557 -15.89786 -15.71801 -15.40922 -15.12317 -14.97920 -14.78282 -14.68130 -14.37946 -14.00606 -13.92024 -13.65644 -13.54332 -13.48338 -13.24940 -13.09241 -13.02560 -12.88477 -12.59534 -12.49812 -12.22380 -11.74924 -11.62144 -11.49421 -11.36700 -11.16619 -10.90534 -10.87931 -10.49200 -10.06363 -9.94928 -9.61712 -4.93405 -0.33403 0.09967 1.26553 1.60921 1.71320 1.97880 2.12388 2.61773 3.10537 3.13153 3.22446 3.55201 3.60742 3.64712 3.65745 3.73545 3.86515 3.97592 3.98306 4.17207 4.18993 4.29203 4.31557 4.37831 4.39513 4.41647 4.46892 4.54787 4.55461 4.60937 4.62636 4.67463 4.70166 4.91652 4.98152 5.01158 5.03996 5.06109 5.12199 5.15876 5.25866 5.29457 5.37327 5.39437 5.51327 5.58529 6.37754 6.49099 6.56882 6.63373 7.24140 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.117 4.117 3 C 0.159 3.841 4 O -0.489 6.489 5 C -0.102 4.102 6 C -0.068 4.068 7 O -0.538 6.538 8 Si 0.680 3.320 9 C -0.048 4.048 10 C -0.138 4.138 11 C 0.561 3.439 12 O -0.532 6.532 13 N -0.719 5.719 14 C 0.145 3.855 15 H 0.092 0.908 16 C -0.132 4.132 17 C -0.108 4.108 18 C -0.089 4.089 19 H 0.080 0.920 20 C 0.079 3.921 21 O -0.572 6.572 22 C -0.115 4.115 23 C -0.126 4.126 24 C -0.067 4.067 25 H 0.072 0.928 26 H 0.077 0.923 27 H 0.070 0.930 28 H 0.398 0.602 29 H 0.083 0.917 30 H 0.382 0.618 31 H -0.257 1.257 32 H -0.250 1.250 33 H 0.145 0.855 34 H 0.397 0.603 35 H 0.074 0.926 36 H 0.070 0.930 37 H 0.058 0.942 38 H 0.071 0.929 39 H 0.044 0.956 40 H 0.045 0.955 41 H 0.380 0.620 42 H 0.060 0.940 43 H 0.071 0.929 44 H 0.074 0.926 45 H 0.083 0.917 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.634 -0.847 -1.635 5.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.118 4.118 3 C 0.113 3.887 4 O -0.301 6.301 5 C -0.103 4.103 6 C -0.178 4.178 7 O -0.346 6.346 8 Si 0.581 3.419 9 C -0.066 4.066 10 C -0.141 4.141 11 C 0.349 3.651 12 O -0.409 6.409 13 N -0.372 5.372 14 C 0.041 3.959 15 H 0.110 0.890 16 C -0.171 4.171 17 C -0.146 4.146 18 C -0.108 4.108 19 H 0.099 0.901 20 C 0.001 3.999 21 O -0.378 6.378 22 C -0.152 4.152 23 C -0.164 4.164 24 C -0.085 4.085 25 H 0.091 0.909 26 H 0.096 0.904 27 H 0.089 0.911 28 H 0.256 0.744 29 H 0.101 0.899 30 H 0.230 0.770 31 H -0.182 1.182 32 H -0.174 1.174 33 H 0.162 0.838 34 H 0.234 0.766 35 H 0.093 0.907 36 H 0.088 0.912 37 H 0.077 0.923 38 H 0.089 0.911 39 H 0.062 0.938 40 H 0.064 0.936 41 H 0.227 0.773 42 H 0.078 0.922 43 H 0.090 0.910 44 H 0.092 0.908 45 H 0.102 0.898 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.623 -1.363 -2.123 4.415 hybrid contribution -1.373 0.992 1.515 2.272 sum -4.995 -0.371 -0.608 5.046 Atomic orbital electron populations 1.20726 0.89745 1.03790 1.02761 1.20162 0.97248 0.92004 1.02394 1.18274 0.88752 0.85286 0.96351 1.84645 1.75684 1.35796 1.33957 1.19490 0.93015 0.93856 1.03923 1.24629 1.10703 0.94322 0.88118 1.86526 1.77742 1.40541 1.29751 0.94780 0.74365 0.82288 0.90441 1.21087 1.00845 0.90116 0.94584 1.19810 0.93430 0.93463 1.07389 1.18120 0.87255 0.83585 0.76165 1.90807 1.13275 1.87491 1.49342 1.46021 1.10251 1.05439 1.75462 1.21003 0.95701 0.82179 0.97003 0.88959 1.21949 0.97937 1.02302 0.94906 1.21482 0.95626 0.97821 0.99651 1.21188 0.95726 1.00241 0.93597 0.90113 1.22232 0.96501 0.97642 0.83520 1.86485 1.37557 1.89538 1.24210 1.21525 0.97612 1.01647 0.94461 1.21818 0.96329 0.98965 0.99302 1.21071 0.92607 0.97698 0.97165 0.90937 0.90379 0.91074 0.74403 0.89946 0.76991 1.18178 1.17431 0.83767 0.76598 0.90745 0.91168 0.92296 0.91071 0.93799 0.93647 0.77300 0.92152 0.91045 0.90763 0.89845 0.85199 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.22 9.78 36.00 0.35 0.58 16 2 C -0.12 0.00 5.89 -104.54 -0.62 -0.62 16 3 C 0.16 0.19 6.66 -39.02 -0.26 -0.07 16 4 O -0.49 -0.13 11.84 -18.83 -0.22 -0.35 16 5 C -0.10 -0.20 5.30 -104.54 -0.55 -0.75 16 6 C -0.07 -0.05 2.36 36.00 0.09 0.04 16 7 O -0.54 -0.53 12.86 -35.23 -0.45 -0.99 16 8 Si 0.68 0.42 30.19 -169.99 -5.13 -4.71 16 9 C -0.05 -0.13 8.20 -39.22 -0.32 -0.45 16 10 C -0.14 -0.26 5.87 -104.96 -0.62 -0.87 16 11 C 0.56 1.59 7.73 -12.44 -0.10 1.50 16 12 O -0.53 -3.43 16.00 5.29 0.08 -3.35 16 13 N -0.72 0.14 4.18 -54.83 -0.23 -0.09 16 14 C 0.15 -0.03 2.78 -67.93 -0.19 -0.22 16 15 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 16 C -0.13 -0.07 5.60 -26.73 -0.15 -0.22 16 17 C -0.11 -0.01 4.94 -26.73 -0.13 -0.15 16 18 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 19 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 20 C 0.08 -0.10 6.43 37.16 0.24 0.13 16 21 O -0.57 -0.18 13.20 -35.23 -0.46 -0.65 16 22 C -0.11 0.33 5.03 -26.73 -0.13 0.19 16 23 C -0.13 0.29 5.61 -26.73 -0.15 0.14 16 24 C -0.07 0.02 9.18 -39.22 -0.36 -0.34 16 25 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 26 H 0.08 -0.11 7.52 -51.93 -0.39 -0.50 16 27 H 0.07 -0.22 8.08 -51.93 -0.42 -0.64 16 28 H 0.40 -1.14 9.06 45.56 0.41 -0.73 16 29 H 0.08 -0.02 7.82 -51.93 -0.41 -0.43 16 30 H 0.38 -1.05 8.74 45.56 0.40 -0.66 16 31 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 32 H -0.25 -1.02 6.75 56.52 0.38 -0.64 16 33 H 0.15 0.47 4.47 -52.49 -0.23 0.24 16 34 H 0.40 -0.99 4.89 -40.82 -0.20 -1.19 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 36 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 37 H 0.06 0.01 7.60 -51.92 -0.39 -0.38 16 38 H 0.07 0.13 7.82 -51.93 -0.41 -0.28 16 39 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.05 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.38 -1.39 9.12 45.56 0.42 -0.98 16 42 H 0.06 -0.22 6.51 -51.93 -0.34 -0.56 16 43 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 44 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.13 -0.42 6.39 -52.49 -0.34 -0.76 16 LS Contribution 364.81 15.07 5.50 5.50 Total: 0.00 -9.04 364.81 -9.36 -18.40 By element: Atomic # 1 Polarization: -7.22 SS G_CDS: -5.31 Total: -12.54 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -3.12 Total: -1.22 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.23 Total: -0.09 kcal Atomic # 8 Polarization: -4.28 SS G_CDS: -1.06 Total: -5.33 kcal Atomic # 14 Polarization: 0.42 SS G_CDS: -5.13 Total: -4.71 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.04 -9.36 -18.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.731 kcal (2) G-P(sol) polarization free energy of solvation -9.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.357 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds