Wall clock time and date at job start Mon Mar 8 2021 02:33:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86294 * 109.47203 * 2 1 4 4 C 1.50707 * 109.47102 * 119.99968 * 2 1 3 5 5 C 1.38498 * 119.80148 * 245.01890 * 4 2 1 6 6 C 1.37840 * 120.29844 * 179.71976 * 5 4 2 7 7 C 1.39667 * 119.90059 * 0.53395 * 6 5 4 8 8 C 1.47541 * 120.18622 * 179.74371 * 7 6 5 9 9 O 1.21587 * 120.00250 * 179.71974 * 8 7 6 10 10 N 1.34774 * 119.99978 * 359.72649 * 8 7 6 11 11 C 1.46502 * 120.00163 * 179.97438 * 10 8 7 12 12 H 1.08992 * 109.47338 * 325.00305 * 11 10 8 13 13 C 1.53006 * 109.46875 * 85.00141 * 11 10 8 14 14 C 1.52997 * 109.47380 * 60.00145 * 13 11 10 15 15 C 1.53001 * 109.47242 * 59.99720 * 14 13 11 16 16 H 1.09008 * 109.46731 * 60.00294 * 15 14 13 17 17 C 1.52997 * 109.47242 * 179.97438 * 15 14 13 18 18 O 1.42898 * 109.47319 * 295.00540 * 17 15 14 19 19 C 1.52994 * 109.47368 * 300.00569 * 15 14 13 20 20 C 1.52997 * 109.47404 * 59.99530 * 19 15 14 21 21 C 1.40167 * 119.62211 * 359.46986 * 7 6 5 22 22 O 1.35661 * 120.14964 * 180.26871 * 21 7 6 23 23 C 1.38095 * 119.80288 * 64.99737 * 4 2 1 24 24 H 0.96700 * 113.99782 * 60.00355 * 1 2 3 25 25 H 1.09002 * 109.47244 * 239.99476 * 2 1 3 26 26 H 1.48508 * 109.99984 * 298.67770 * 3 2 1 27 27 H 1.48493 * 110.00416 * 59.99841 * 3 2 1 28 28 H 1.08001 * 119.85145 * 359.97438 * 5 4 2 29 29 H 1.07997 * 120.04546 * 180.28110 * 6 5 4 30 30 H 0.97006 * 120.00602 * 359.97438 * 10 8 7 31 31 H 1.08998 * 109.47136 * 180.02562 * 13 11 10 32 32 H 1.09000 * 109.46811 * 299.99928 * 13 11 10 33 33 H 1.09008 * 109.47017 * 300.00189 * 14 13 11 34 34 H 1.08998 * 109.47192 * 180.02562 * 14 13 11 35 35 H 1.09002 * 109.47153 * 175.00232 * 17 15 14 36 36 H 1.09001 * 109.46832 * 55.00423 * 17 15 14 37 37 H 0.96701 * 113.99881 * 180.02562 * 18 17 15 38 38 H 1.09000 * 109.47476 * 179.97438 * 19 15 14 39 39 H 1.09008 * 109.46970 * 299.99579 * 19 15 14 40 40 H 1.08995 * 109.47630 * 59.99990 * 20 19 15 41 41 H 1.09002 * 109.47754 * 180.02562 * 20 19 15 42 42 H 0.96705 * 113.99627 * 90.00477 * 22 21 7 43 43 H 1.07999 * 119.96268 * 0.02616 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6393 -0.0069 2.1907 6 6 3.0986 -0.6452 3.3228 7 6 2.8591 -2.0099 3.4983 8 6 3.3526 -2.7006 4.7050 9 8 3.1378 -3.8877 4.8567 10 7 4.0415 -2.0157 5.6392 11 6 4.5311 -2.7014 6.8377 12 1 3.8145 -3.4660 7.1372 13 6 5.8799 -3.3572 6.5348 14 6 6.8860 -2.2840 6.1144 15 6 7.0547 -1.2709 7.2485 16 1 7.4191 -1.7811 8.1402 17 6 8.0613 -0.1980 6.8284 18 8 9.3492 -0.7934 6.6586 19 6 5.7061 -0.6151 7.5514 20 6 4.7000 -1.6884 7.9718 21 6 2.1422 -2.7183 2.5242 22 8 1.8987 -4.0430 2.6863 23 6 1.6826 -2.0589 1.3941 24 1 -0.3933 0.4417 -0.7651 25 1 1.7924 -0.5139 -0.8899 26 1 1.5880 2.4585 -1.2243 27 1 1.5616 2.4679 1.2084 28 1 2.8289 1.0475 2.0538 29 1 3.6463 -0.0916 4.0711 30 1 4.2132 -1.0687 5.5181 31 1 6.2440 -3.8678 7.4263 32 1 5.7597 -4.0789 5.7268 33 1 6.5217 -1.7737 5.2227 34 1 7.8467 -2.7512 5.8982 35 1 8.1153 0.5712 7.5989 36 1 7.7420 0.2515 5.8881 37 1 10.0387 -0.1699 6.3921 38 1 5.8262 0.1063 8.3597 39 1 5.3417 -0.1048 6.6597 40 1 5.0642 -2.1986 8.8634 41 1 3.7390 -1.2212 8.1872 42 1 1.0731 -4.2372 3.1508 43 1 1.1299 -2.6007 0.6409 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:26 Heat of formation + Delta-G solvation = -136.803732 kcal Electronic energy + Delta-G solvation = -26076.560206 eV Core-core repulsion = 22281.071137 eV Total energy + Delta-G solvation = -3795.489070 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.71853 -40.61184 -39.19202 -38.34270 -37.41000 -37.26833 -34.75378 -33.12237 -31.83946 -31.21663 -31.07933 -27.60315 -26.31514 -23.87204 -23.75894 -23.56450 -22.20223 -21.73557 -20.13907 -19.37738 -18.70446 -18.61947 -18.26136 -17.47266 -16.83862 -16.55399 -16.36192 -16.22639 -15.87907 -15.64324 -15.59708 -15.35517 -14.90869 -14.73799 -14.54836 -14.08259 -13.99343 -13.91418 -13.51494 -13.27666 -13.20977 -13.02552 -12.94224 -12.58541 -12.49092 -12.20918 -12.08505 -11.60531 -11.58530 -11.34300 -11.14434 -10.87584 -10.71111 -10.61999 -10.10501 -9.94583 -9.73273 -5.08323 -0.35718 0.14690 1.12661 1.47889 1.80418 1.84640 2.15945 2.60407 3.12597 3.14787 3.19681 3.56954 3.61072 3.66446 3.69467 3.73582 3.88773 3.99017 4.05914 4.18976 4.20392 4.23897 4.32015 4.40041 4.41668 4.47836 4.56908 4.58790 4.63024 4.70510 4.74110 4.92878 4.98562 5.00285 5.05550 5.08147 5.18304 5.25165 5.29149 5.39691 5.42132 5.55106 5.59298 6.29396 6.53466 6.65408 6.74917 7.31064 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.083 4.083 3 Si 0.687 3.313 4 C -0.029 4.029 5 C -0.134 4.134 6 C -0.065 4.065 7 C -0.164 4.164 8 C 0.559 3.441 9 O -0.518 6.518 10 N -0.721 5.721 11 C 0.147 3.853 12 H 0.090 0.910 13 C -0.132 4.132 14 C -0.108 4.108 15 C -0.089 4.089 16 H 0.080 0.920 17 C 0.079 3.921 18 O -0.572 6.572 19 C -0.114 4.114 20 C -0.126 4.126 21 C 0.172 3.828 22 O -0.476 6.476 23 C -0.128 4.128 24 H 0.383 0.617 25 H 0.081 0.919 26 H -0.259 1.259 27 H -0.253 1.253 28 H 0.136 0.864 29 H 0.133 0.867 30 H 0.396 0.604 31 H 0.073 0.927 32 H 0.070 0.930 33 H 0.059 0.941 34 H 0.071 0.929 35 H 0.045 0.955 36 H 0.044 0.956 37 H 0.380 0.620 38 H 0.070 0.930 39 H 0.060 0.940 40 H 0.082 0.918 41 H 0.072 0.928 42 H 0.398 0.602 43 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.621 6.310 -0.489 6.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.192 4.192 3 Si 0.588 3.412 4 C -0.030 4.030 5 C -0.152 4.152 6 C -0.084 4.084 7 C -0.167 4.167 8 C 0.346 3.654 9 O -0.394 6.394 10 N -0.375 5.375 11 C 0.043 3.957 12 H 0.108 0.892 13 C -0.171 4.171 14 C -0.145 4.145 15 C -0.108 4.108 16 H 0.098 0.902 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.152 4.152 20 C -0.164 4.164 21 C 0.126 3.874 22 O -0.287 6.287 23 C -0.146 4.146 24 H 0.231 0.769 25 H 0.099 0.901 26 H -0.184 1.184 27 H -0.178 1.178 28 H 0.153 0.847 29 H 0.150 0.850 30 H 0.233 0.767 31 H 0.092 0.908 32 H 0.089 0.911 33 H 0.078 0.922 34 H 0.089 0.911 35 H 0.063 0.937 36 H 0.063 0.937 37 H 0.227 0.773 38 H 0.089 0.911 39 H 0.079 0.921 40 H 0.101 0.899 41 H 0.091 0.909 42 H 0.256 0.744 43 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 1.532 5.345 0.083 5.561 hybrid contribution -1.161 0.932 -0.578 1.597 sum 0.372 6.277 -0.495 6.307 Atomic orbital electron populations 1.86583 1.17389 1.80296 1.49933 1.24900 0.84840 1.11370 0.98112 0.94949 0.91548 0.74199 0.80494 1.19296 0.95866 0.93313 0.94517 1.20913 1.00200 1.00028 0.94035 1.21095 0.97570 0.92605 0.97153 1.20438 1.05466 0.94333 0.96489 1.18027 0.78158 0.86695 0.82516 1.90829 1.56747 1.14495 1.77328 1.46039 1.56741 1.13139 1.21576 1.20969 0.95932 0.94825 0.84021 0.89165 1.21942 0.94405 0.98233 1.02486 1.21474 0.99494 0.96267 0.97292 1.21187 0.93630 0.96101 0.99841 0.90169 1.22228 0.83626 0.94865 0.99165 1.86485 1.19192 1.39976 1.92129 1.21521 0.94323 0.97906 1.01462 1.21819 0.99779 0.96825 0.98011 1.18465 0.93780 0.83496 0.91677 1.84756 1.46167 1.17952 1.79838 1.21320 1.00747 0.93960 0.98616 0.76911 0.90061 1.18407 1.17758 0.84704 0.84972 0.76726 0.90843 0.91127 0.92235 0.91063 0.93690 0.93728 0.77300 0.91094 0.92108 0.89899 0.90891 0.74386 0.84354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.12 12.81 -35.23 -0.45 -0.57 16 2 C -0.08 0.08 2.78 36.01 0.10 0.18 16 3 Si 0.69 -1.44 29.83 -169.99 -5.07 -6.51 16 4 C -0.03 -0.01 5.39 -104.57 -0.56 -0.58 16 5 C -0.13 0.11 8.64 -39.63 -0.34 -0.24 16 6 C -0.07 0.05 9.54 -39.19 -0.37 -0.32 16 7 C -0.16 -0.29 5.89 -104.85 -0.62 -0.91 16 8 C 0.56 1.63 7.73 -12.47 -0.10 1.54 16 9 O -0.52 -3.36 14.82 -16.58 -0.25 -3.61 16 10 N -0.72 0.09 4.18 -54.84 -0.23 -0.14 16 11 C 0.15 -0.01 2.78 -67.92 -0.19 -0.19 16 12 H 0.09 0.15 7.58 -51.93 -0.39 -0.25 16 13 C -0.13 -0.09 5.60 -26.73 -0.15 -0.24 16 14 C -0.11 -0.01 4.94 -26.73 -0.13 -0.15 16 15 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 16 H 0.08 0.00 8.14 -51.92 -0.42 -0.43 16 17 C 0.08 -0.11 6.43 37.16 0.24 0.13 16 18 O -0.57 -0.13 13.19 -35.23 -0.46 -0.59 16 19 C -0.11 0.32 5.03 -26.74 -0.13 0.18 16 20 C -0.13 0.27 5.61 -26.73 -0.15 0.12 16 21 C 0.17 0.45 6.72 -38.70 -0.26 0.19 16 22 O -0.48 -1.62 11.58 -40.56 -0.47 -2.09 16 23 C -0.13 -0.19 9.60 -39.47 -0.38 -0.57 16 24 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 25 H 0.08 -0.20 7.96 -51.93 -0.41 -0.62 16 26 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 27 H -0.25 -0.17 7.04 56.52 0.40 0.23 16 28 H 0.14 -0.39 4.83 -52.49 -0.25 -0.64 16 29 H 0.13 -0.51 6.40 -52.49 -0.34 -0.85 16 30 H 0.40 -0.98 4.90 -40.82 -0.20 -1.18 16 31 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 32 H 0.07 0.21 8.14 -51.93 -0.42 -0.21 16 33 H 0.06 0.01 7.60 -51.92 -0.39 -0.39 16 34 H 0.07 0.13 7.82 -51.93 -0.41 -0.28 16 35 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 36 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.38 -1.44 9.12 45.56 0.42 -1.03 16 38 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.06 -0.23 6.51 -51.92 -0.34 -0.56 16 40 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 41 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 42 H 0.40 -0.06 9.06 45.56 0.41 0.35 16 43 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 LS Contribution 343.40 15.07 5.17 5.17 Total: 0.00 -9.86 343.40 -9.54 -19.40 By element: Atomic # 1 Polarization: -5.58 SS G_CDS: -4.51 Total: -10.09 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -3.27 Total: -0.97 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: -0.23 Total: -0.14 kcal Atomic # 8 Polarization: -5.23 SS G_CDS: -1.63 Total: -6.86 kcal Atomic # 14 Polarization: -1.44 SS G_CDS: -5.07 Total: -6.51 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -9.86 -9.54 -19.40 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.405 kcal (2) G-P(sol) polarization free energy of solvation -9.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -127.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.398 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds