Wall clock time and date at job start Mon Mar 8 2021 02:33:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46895 * 1 3 3 C 1.46905 * 110.99931 * 2 1 4 4 C 1.39045 * 111.00253 * 123.95833 * 2 1 3 5 5 C 1.39200 * 119.93678 * 120.00070 * 4 2 1 6 6 C 1.50698 * 119.95995 * 359.97438 * 5 4 2 7 7 O 1.42905 * 109.47321 * 75.00311 * 6 5 4 8 8 Si 1.86299 * 109.46871 * 195.00011 * 6 5 4 9 9 C 1.37622 * 120.07055 * 180.25466 * 5 4 2 10 10 C 1.39771 * 119.93074 * 359.51135 * 9 5 4 11 11 C 1.47525 * 120.06976 * 180.21301 * 10 9 5 12 12 O 1.21597 * 120.00031 * 0.29534 * 11 10 9 13 13 N 1.34784 * 119.99917 * 180.29916 * 11 10 9 14 14 C 1.46504 * 119.99573 * 179.97438 * 13 11 10 15 15 H 1.08996 * 109.47110 * 324.99705 * 14 13 11 16 16 C 1.52997 * 109.46854 * 84.99771 * 14 13 11 17 17 C 1.53003 * 109.47302 * 60.00018 * 16 14 13 18 18 C 1.53000 * 109.47283 * 59.99428 * 17 16 14 19 19 H 1.09001 * 109.46801 * 59.99957 * 18 17 16 20 20 C 1.52995 * 109.47157 * 179.97438 * 18 17 16 21 21 O 1.42899 * 109.47551 * 295.00587 * 20 18 17 22 22 C 1.53003 * 109.47130 * 300.00403 * 18 17 16 23 23 C 1.53000 * 109.47180 * 59.99961 * 22 18 17 24 24 C 1.39818 * 119.86163 * 0.50860 * 10 9 5 25 25 C 1.37579 * 119.93217 * 359.72469 * 24 10 9 26 26 H 1.09001 * 109.46891 * 296.04291 * 1 2 3 27 27 H 1.08998 * 109.47575 * 56.04668 * 1 2 3 28 28 H 1.08999 * 109.47029 * 176.04650 * 1 2 3 29 29 H 1.09002 * 109.47138 * 183.95486 * 3 2 1 30 30 H 1.08999 * 109.46866 * 303.95212 * 3 2 1 31 31 H 1.08996 * 109.47180 * 63.95459 * 3 2 1 32 32 H 1.09001 * 109.47612 * 315.00579 * 6 5 4 33 33 H 0.96696 * 114.00036 * 299.99741 * 7 6 5 34 34 H 1.48504 * 109.99999 * 60.00368 * 8 6 5 35 35 H 1.48504 * 110.00212 * 181.32086 * 8 6 5 36 36 H 1.08003 * 120.03486 * 179.72338 * 9 5 4 37 37 H 0.96996 * 119.99900 * 359.97438 * 13 11 10 38 38 H 1.09003 * 109.46798 * 179.97438 * 16 14 13 39 39 H 1.08997 * 109.47560 * 299.99564 * 16 14 13 40 40 H 1.09003 * 109.46555 * 299.99367 * 17 16 14 41 41 H 1.08992 * 109.47124 * 179.97438 * 17 16 14 42 42 H 1.09004 * 109.46834 * 55.00440 * 20 18 17 43 43 H 1.08999 * 109.47190 * 175.00004 * 20 18 17 44 44 H 0.96696 * 114.00093 * 179.97438 * 21 20 18 45 45 H 1.09001 * 109.46914 * 299.99485 * 22 18 17 46 46 H 1.09003 * 109.46844 * 179.97438 * 22 18 17 47 47 H 1.08998 * 109.47028 * 180.02562 * 23 22 18 48 48 H 1.08996 * 109.47246 * 60.00242 * 23 22 18 49 49 H 1.08001 * 120.03418 * 179.74417 * 24 10 9 50 50 H 1.08001 * 119.96743 * 180.02562 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.9673 -0.7251 1.0767 5 6 2.7794 -1.8331 0.8518 6 6 3.1166 -2.2452 -0.5580 7 8 4.0855 -1.3447 -1.0988 8 14 3.8116 -3.9737 -0.5502 9 6 3.2698 -2.5558 1.9153 10 6 2.9602 -2.1703 3.2226 11 6 3.4881 -2.9401 4.3649 12 8 4.1979 -3.9079 4.1699 13 7 3.1837 -2.5706 5.6249 14 6 3.7076 -3.3354 6.7593 15 1 3.7541 -4.3918 6.4948 16 6 5.1106 -2.8345 7.1076 17 6 5.0452 -1.3516 7.4789 18 6 4.1238 -1.1684 8.6865 19 1 4.5135 -1.7375 9.5305 20 6 4.0589 0.3143 9.0582 21 8 5.3468 0.7527 9.4953 22 6 2.7207 -1.6693 8.3381 23 6 2.7861 -3.1522 7.9669 24 6 2.1439 -1.0572 3.4452 25 6 1.6527 -0.3416 2.3778 26 1 -0.3633 0.4512 0.9233 27 1 -0.3634 0.5739 -0.8524 28 1 -0.3633 -1.0252 -0.0709 29 1 3.0827 1.3433 -0.0709 30 1 1.5898 1.9163 -0.8525 31 1 1.7044 1.8724 0.9233 32 1 2.2149 -2.2189 -1.1699 33 1 3.7909 -0.4244 -1.1334 34 1 2.8134 -4.9200 0.0099 35 1 4.1778 -4.3802 -1.9307 36 1 3.8962 -3.4181 1.7400 37 1 2.6177 -1.7983 5.7805 38 1 5.5002 -3.4033 7.9519 39 1 5.7671 -2.9650 6.2473 40 1 4.6555 -0.7827 6.6348 41 1 6.0447 -0.9949 7.7275 42 1 3.7541 0.8942 8.1870 43 1 3.3350 0.4564 9.8606 44 1 5.3801 1.6856 9.7473 45 1 2.3309 -1.1003 7.4941 46 1 2.0644 -1.5392 9.1986 47 1 1.7866 -3.5089 7.7182 48 1 3.1758 -3.7212 8.8109 49 1 1.8994 -0.7592 4.4541 50 1 1.0225 0.5186 2.5491 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_13422196.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:32 Heat of formation + Delta-G solvation = -87.332201 kcal Electronic energy + Delta-G solvation = -30239.987862 eV Core-core repulsion = 26233.287463 eV Total energy + Delta-G solvation = -4006.700399 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.193 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.83545 -40.97897 -39.47854 -37.74682 -37.50335 -37.19728 -34.85972 -32.95001 -31.94170 -31.82127 -30.83103 -28.79730 -26.92665 -26.77835 -25.82125 -23.78098 -23.49627 -22.98308 -22.19767 -21.38113 -20.17919 -19.22295 -18.32213 -17.95790 -17.88431 -17.31503 -16.61696 -16.60218 -16.42275 -16.02546 -15.90705 -15.82949 -15.39751 -15.15243 -15.11658 -14.97872 -14.78126 -14.58140 -14.06288 -13.96879 -13.92694 -13.68627 -13.51898 -13.25888 -13.14786 -13.07555 -13.05476 -12.87877 -12.71375 -12.52217 -12.23946 -11.89888 -11.63314 -11.38261 -11.29279 -11.17898 -11.10937 -10.91092 -10.84710 -10.12067 -10.07197 -9.81566 -9.75798 -4.72872 -0.39037 0.13074 1.50383 1.71616 1.80994 2.10262 2.10679 2.59376 2.67556 3.11462 3.47048 3.55697 3.61764 3.64760 3.69032 3.84022 3.87940 3.96208 3.97367 4.05354 4.13447 4.15109 4.16980 4.28291 4.33178 4.34254 4.36606 4.38440 4.40210 4.44214 4.53818 4.57759 4.59690 4.67665 4.70643 4.73228 4.75461 4.90011 4.95985 4.99032 5.03953 5.04908 5.11940 5.19465 5.25223 5.36197 5.38593 5.47656 5.55288 5.57128 6.09989 6.46753 6.62174 6.67525 7.21729 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.517 5.517 3 C 0.023 3.977 4 C 0.123 3.877 5 C -0.098 4.098 6 C -0.062 4.062 7 O -0.533 6.533 8 Si 0.730 3.270 9 C -0.043 4.043 10 C -0.132 4.132 11 C 0.559 3.441 12 O -0.529 6.529 13 N -0.719 5.719 14 C 0.145 3.855 15 H 0.092 0.908 16 C -0.132 4.132 17 C -0.108 4.108 18 C -0.089 4.089 19 H 0.081 0.919 20 C 0.079 3.921 21 O -0.572 6.572 22 C -0.114 4.114 23 C -0.127 4.127 24 C -0.073 4.073 25 C -0.153 4.153 26 H 0.035 0.965 27 H 0.078 0.922 28 H 0.072 0.928 29 H 0.075 0.925 30 H 0.079 0.921 31 H 0.036 0.964 32 H 0.081 0.919 33 H 0.364 0.636 34 H -0.251 1.251 35 H -0.252 1.252 36 H 0.147 0.853 37 H 0.397 0.603 38 H 0.074 0.926 39 H 0.071 0.929 40 H 0.058 0.942 41 H 0.071 0.929 42 H 0.043 0.957 43 H 0.045 0.955 44 H 0.380 0.620 45 H 0.059 0.941 46 H 0.070 0.930 47 H 0.073 0.927 48 H 0.083 0.917 49 H 0.127 0.873 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.263 5.285 3.278 7.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.238 5.238 3 C -0.123 4.123 4 C 0.029 3.971 5 C -0.100 4.100 6 C -0.171 4.171 7 O -0.339 6.339 8 Si 0.629 3.371 9 C -0.062 4.062 10 C -0.135 4.135 11 C 0.347 3.653 12 O -0.406 6.406 13 N -0.372 5.372 14 C 0.041 3.959 15 H 0.110 0.890 16 C -0.171 4.171 17 C -0.146 4.146 18 C -0.108 4.108 19 H 0.099 0.901 20 C 0.001 3.999 21 O -0.378 6.378 22 C -0.152 4.152 23 C -0.165 4.165 24 C -0.092 4.092 25 C -0.173 4.173 26 H 0.054 0.946 27 H 0.097 0.903 28 H 0.090 0.910 29 H 0.093 0.907 30 H 0.098 0.902 31 H 0.054 0.946 32 H 0.098 0.902 33 H 0.212 0.788 34 H -0.175 1.175 35 H -0.177 1.177 36 H 0.164 0.836 37 H 0.233 0.767 38 H 0.093 0.907 39 H 0.090 0.910 40 H 0.077 0.923 41 H 0.090 0.910 42 H 0.062 0.938 43 H 0.063 0.937 44 H 0.227 0.773 45 H 0.078 0.922 46 H 0.089 0.911 47 H 0.091 0.909 48 H 0.102 0.898 49 H 0.144 0.856 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.210 2.378 2.231 4.576 hybrid contribution -2.172 2.784 0.665 3.593 sum -5.382 5.162 2.896 8.000 Atomic orbital electron populations 1.22497 0.85051 1.03082 1.01463 1.59460 1.09204 1.14607 1.40572 1.22552 1.01250 0.86888 1.01638 1.18831 0.95278 0.94039 0.88961 1.20252 0.97822 0.95315 0.96567 1.25284 0.96510 1.05257 0.90082 1.86739 1.41316 1.21040 1.84761 0.92875 0.88619 0.71609 0.84016 1.21037 0.96364 0.98289 0.90513 1.19927 1.01910 0.97865 0.93769 1.18137 0.80352 0.84023 0.82834 1.90815 1.37136 1.27358 1.85272 1.46033 1.52861 1.32955 1.05354 1.21006 0.93246 0.96743 0.84890 0.88955 1.21947 0.96471 0.96503 1.02141 1.21478 1.00304 0.96107 0.96665 1.21190 0.95775 0.94581 0.99227 0.90100 1.22225 0.84811 0.95202 0.97643 1.86483 1.31626 1.31509 1.88132 1.21523 0.96317 0.95941 1.01438 1.21821 1.00131 0.96787 0.97710 1.21125 0.95354 0.93727 0.99019 1.21564 1.01931 1.01029 0.92804 0.94634 0.90298 0.90951 0.90671 0.90199 0.94588 0.90180 0.78785 1.17496 1.17695 0.83630 0.76654 0.90743 0.91001 0.92310 0.91014 0.93844 0.93689 0.77294 0.92215 0.91094 0.90868 0.89817 0.85567 0.85337 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.34 60.06 0.56 0.51 16 2 N -0.52 0.43 3.70 -186.86 -0.69 -0.26 16 3 C 0.02 -0.05 9.09 60.07 0.55 0.49 16 4 C 0.12 0.03 4.66 -83.86 -0.39 -0.36 16 5 C -0.10 -0.15 5.28 -104.49 -0.55 -0.70 16 6 C -0.06 -0.11 2.29 36.00 0.08 -0.03 16 7 O -0.53 -1.26 12.65 -35.23 -0.45 -1.71 16 8 Si 0.73 1.40 30.16 -169.99 -5.13 -3.73 16 9 C -0.04 -0.09 8.19 -39.23 -0.32 -0.41 16 10 C -0.13 -0.16 5.88 -104.95 -0.62 -0.78 16 11 C 0.56 1.26 7.73 -12.47 -0.10 1.16 16 12 O -0.53 -3.00 16.00 5.28 0.08 -2.92 16 13 N -0.72 0.42 4.18 -54.85 -0.23 0.19 16 14 C 0.15 -0.07 2.78 -67.93 -0.19 -0.26 16 15 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 16 C -0.13 -0.02 5.60 -26.73 -0.15 -0.17 16 17 C -0.11 0.03 4.94 -26.73 -0.13 -0.10 16 18 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 19 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 20 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 21 O -0.57 -0.06 13.19 -35.23 -0.46 -0.52 16 22 C -0.11 0.34 5.03 -26.73 -0.13 0.21 16 23 C -0.13 0.31 5.61 -26.73 -0.15 0.16 16 24 C -0.07 0.08 9.53 -39.23 -0.37 -0.30 16 25 C -0.15 0.14 8.53 -39.45 -0.34 -0.19 16 26 H 0.04 -0.08 7.10 -51.93 -0.37 -0.45 16 27 H 0.08 -0.21 8.12 -51.93 -0.42 -0.63 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.07 -0.18 7.41 -51.93 -0.38 -0.56 16 30 H 0.08 -0.25 8.12 -51.93 -0.42 -0.67 16 31 H 0.04 -0.09 7.32 -51.93 -0.38 -0.47 16 32 H 0.08 0.14 7.78 -51.93 -0.40 -0.26 16 33 H 0.36 0.12 7.48 45.56 0.34 0.46 16 34 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 35 H -0.25 -1.09 7.11 56.52 0.40 -0.69 16 36 H 0.15 0.28 4.69 -52.48 -0.25 0.03 16 37 H 0.40 -1.11 4.88 -40.82 -0.20 -1.31 16 38 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 39 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 40 H 0.06 -0.02 7.60 -51.93 -0.39 -0.41 16 41 H 0.07 0.10 7.82 -51.93 -0.41 -0.31 16 42 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 44 H 0.38 -1.47 9.12 45.56 0.42 -1.05 16 45 H 0.06 -0.23 6.51 -51.93 -0.34 -0.57 16 46 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 49 H 0.13 -0.47 6.39 -52.49 -0.34 -0.81 16 50 H 0.13 -0.32 6.99 -52.49 -0.37 -0.69 16 LS Contribution 385.62 15.07 5.81 5.81 Total: 0.00 -7.05 385.62 -10.60 -17.65 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -7.31 Total: -13.79 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -2.23 Total: -0.73 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.92 Total: -0.07 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.83 Total: -5.14 kcal Atomic # 14 Polarization: 1.40 SS G_CDS: -5.13 Total: -3.73 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -7.05 -10.60 -17.65 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13422196.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.683 kcal (2) G-P(sol) polarization free energy of solvation -7.045 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.604 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.649 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.332 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds