Wall clock time and date at job start Mon Mar 8 2021 02:33:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35993 * 117.00914 * 2 1 4 4 C 1.38559 * 120.05976 * 0.29523 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.25344 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38383 * 120.12685 * 0.27431 * 9 5 4 11 11 Cl 1.73603 * 120.00494 * 179.97438 * 10 9 5 12 12 C 1.38615 * 119.98120 * 0.02562 * 10 9 5 13 13 O 1.36027 * 120.07277 * 179.97438 * 12 10 9 14 14 C 1.42898 * 116.99980 * 90.00295 * 13 12 10 15 15 C 1.53002 * 109.46845 * 269.99505 * 14 13 12 16 16 C 1.50701 * 109.47338 * 149.99755 * 14 13 12 17 17 O 1.21285 * 119.99928 * 4.99290 * 16 14 13 18 18 N 1.34771 * 120.00154 * 184.99493 * 16 14 13 19 19 C 1.46502 * 120.00056 * 179.97438 * 18 16 14 20 20 H 1.09000 * 109.46961 * 324.99988 * 19 18 16 21 21 C 1.53002 * 109.47029 * 85.00231 * 19 18 16 22 22 C 1.52995 * 109.47228 * 60.00208 * 21 19 18 23 23 C 1.53001 * 109.47323 * 59.99871 * 22 21 19 24 24 H 1.09004 * 109.46758 * 59.99761 * 23 22 21 25 25 C 1.52999 * 109.47106 * 180.02562 * 23 22 21 26 26 O 1.42897 * 109.47173 * 294.99751 * 25 23 22 27 27 C 1.53002 * 109.47074 * 300.00223 * 23 22 21 28 28 C 1.52995 * 109.47228 * 59.99718 * 27 23 22 29 29 H 1.09006 * 109.46768 * 59.99989 * 1 2 3 30 30 H 1.08996 * 109.47835 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46879 * 300.00345 * 1 2 3 32 32 H 1.08004 * 119.99245 * 359.97438 * 4 3 2 33 33 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 34 34 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 35 35 H 1.48497 * 110.00028 * 58.68223 * 8 6 5 36 36 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 37 37 H 1.07994 * 119.93903 * 180.24913 * 9 5 4 38 38 H 1.09000 * 109.47323 * 29.99410 * 14 13 12 39 39 H 1.08993 * 109.47050 * 59.99793 * 15 14 13 40 40 H 1.09000 * 109.47441 * 180.02562 * 15 14 13 41 41 H 1.09000 * 109.47082 * 300.00052 * 15 14 13 42 42 H 0.97001 * 120.00359 * 0.02562 * 18 16 14 43 43 H 1.09004 * 109.46951 * 180.02562 * 21 19 18 44 44 H 1.08997 * 109.46731 * 299.99927 * 21 19 18 45 45 H 1.09004 * 109.46885 * 300.00139 * 22 21 19 46 46 H 1.08993 * 109.47435 * 180.02562 * 22 21 19 47 47 H 1.08996 * 109.47095 * 55.00299 * 25 23 22 48 48 H 1.09004 * 109.46710 * 174.99717 * 25 23 22 49 49 H 0.96699 * 114.00237 * 180.02562 * 26 25 23 50 50 H 1.09004 * 109.47301 * 299.99834 * 27 23 22 51 51 H 1.09003 * 109.47401 * 179.97438 * 27 23 22 52 52 H 1.09007 * 109.47548 * 179.97438 * 28 27 23 53 53 H 1.09004 * 109.47399 * 59.99975 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0062 5 6 1.9221 3.6061 0.0009 6 6 1.1007 4.8696 0.0013 7 8 0.2763 4.9021 -1.1654 8 14 2.2350 6.3475 0.0018 9 6 3.3022 3.6810 0.0009 10 6 4.0606 2.5235 0.0004 11 17 5.7939 2.6212 -0.0002 12 6 3.4359 1.2860 -0.0005 13 8 4.1796 0.1471 -0.0015 14 6 4.5343 -0.3972 1.2713 15 6 5.8688 0.1972 1.7261 16 6 4.6635 -1.8944 1.1591 17 8 4.5603 -2.4326 0.0771 18 7 4.8937 -2.6354 2.2610 19 6 5.0187 -4.0910 2.1520 20 1 4.3444 -4.4566 1.3776 21 6 6.4595 -4.4532 1.7863 22 6 7.4060 -3.9400 2.8734 23 6 7.0422 -4.5849 4.2123 24 1 7.1352 -5.6679 4.1311 25 6 7.9883 -4.0712 5.2995 26 8 9.3193 -4.5089 5.0184 27 6 5.6014 -4.2227 4.5780 28 6 4.6549 -4.7359 3.4910 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8899 32 1 0.2147 2.3192 0.0106 33 1 0.4719 4.8938 0.8913 34 1 0.7702 4.8832 -1.9967 35 1 3.1196 6.3093 -1.1903 36 1 1.4371 7.6000 0.0016 37 1 3.7896 4.6446 0.0008 38 1 3.7608 -0.1528 1.9993 39 1 5.7754 1.2801 1.8072 40 1 6.1396 -0.2183 2.6967 41 1 6.6423 -0.0472 0.9981 42 1 4.9758 -2.2051 3.1265 43 1 6.5524 -5.5362 1.7047 44 1 6.7186 -3.9938 0.8324 45 1 7.3129 -2.8570 2.9545 46 1 8.4325 -4.1976 2.6126 47 1 7.9608 -2.9818 5.3201 48 1 7.6746 -4.4610 6.2679 49 1 9.9741 -4.2195 5.6684 50 1 5.5083 -3.1397 4.6592 51 1 5.3420 -4.6825 5.5317 52 1 3.6283 -4.4783 3.7517 53 1 4.7479 -5.8189 3.4098 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:35 Heat of formation + Delta-G solvation = -170.790423 kcal Electronic energy + Delta-G solvation = -37261.641713 eV Core-core repulsion = 32319.584028 eV Total energy + Delta-G solvation = -4942.057685 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.158 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.03011 -41.37272 -39.91636 -39.28554 -38.90363 -37.82392 -37.40780 -36.99505 -34.93882 -33.35652 -31.83618 -31.74565 -31.39070 -30.88262 -28.59148 -26.86393 -26.45615 -25.29053 -23.70108 -23.67779 -22.92171 -22.21294 -21.84010 -20.22199 -19.65028 -18.84846 -18.80368 -18.35694 -18.14633 -17.58276 -17.13349 -16.86616 -16.59984 -16.36859 -16.29534 -16.15622 -16.06365 -15.82689 -15.69628 -15.39038 -15.13457 -14.93718 -14.63850 -14.44557 -14.29766 -14.14312 -13.92657 -13.80095 -13.64655 -13.44475 -13.25901 -13.19538 -13.03197 -12.81433 -12.72294 -12.65859 -12.44148 -12.40216 -12.13078 -12.01098 -11.84820 -11.70350 -11.55193 -11.35558 -11.30991 -11.09624 -10.78938 -10.74181 -10.70751 -10.11571 -9.84780 -9.44925 -4.93931 -0.35542 -0.04304 0.82953 1.24533 1.50070 1.60430 1.65899 1.94997 2.16216 2.20211 2.68789 3.27740 3.32914 3.46125 3.55619 3.69267 3.73155 3.73890 3.79920 3.82334 3.92060 3.95937 3.98934 4.04253 4.06720 4.25463 4.29087 4.29178 4.42318 4.43601 4.49627 4.50168 4.51128 4.57690 4.65453 4.67310 4.67489 4.68902 4.75443 4.77263 4.82682 5.02010 5.06276 5.06719 5.10292 5.11824 5.16734 5.21883 5.23800 5.41013 5.44176 5.51120 5.90106 6.30921 6.41695 6.49688 6.92421 7.17061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.323 6.323 3 C 0.118 3.882 4 C -0.163 4.163 5 C -0.061 4.061 6 C -0.076 4.076 7 O -0.543 6.543 8 Si 0.758 3.242 9 C -0.132 4.132 10 C -0.017 4.017 11 Cl -0.038 7.038 12 C 0.054 3.946 13 O -0.311 6.311 14 C 0.076 3.924 15 C -0.174 4.174 16 C 0.517 3.483 17 O -0.567 6.567 18 N -0.702 5.702 19 C 0.149 3.851 20 H 0.066 0.934 21 C -0.129 4.129 22 C -0.100 4.100 23 C -0.087 4.087 24 H 0.067 0.933 25 C 0.076 3.924 26 O -0.599 6.599 27 C -0.109 4.109 28 C -0.119 4.119 29 H 0.065 0.935 30 H 0.112 0.888 31 H 0.077 0.923 32 H 0.159 0.841 33 H 0.142 0.858 34 H 0.388 0.612 35 H -0.283 1.283 36 H -0.296 1.296 37 H 0.160 0.840 38 H 0.106 0.894 39 H 0.087 0.913 40 H 0.100 0.900 41 H 0.056 0.944 42 H 0.413 0.587 43 H 0.074 0.926 44 H 0.040 0.960 45 H 0.065 0.935 46 H 0.050 0.950 47 H 0.056 0.944 48 H 0.057 0.943 49 H 0.395 0.605 50 H 0.077 0.923 51 H 0.085 0.915 52 H 0.084 0.916 53 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.049 2.975 10.469 11.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.236 6.236 3 C 0.071 3.929 4 C -0.182 4.182 5 C -0.062 4.062 6 C -0.185 4.185 7 O -0.351 6.351 8 Si 0.663 3.337 9 C -0.150 4.150 10 C -0.045 4.045 11 Cl -0.009 7.009 12 C 0.008 3.992 13 O -0.227 6.227 14 C 0.018 3.982 15 C -0.232 4.232 16 C 0.303 3.697 17 O -0.445 6.445 18 N -0.357 5.357 19 C 0.044 3.956 20 H 0.084 0.916 21 C -0.168 4.168 22 C -0.138 4.138 23 C -0.106 4.106 24 H 0.085 0.915 25 C -0.001 4.001 26 O -0.407 6.407 27 C -0.147 4.147 28 C -0.156 4.156 29 H 0.084 0.916 30 H 0.131 0.869 31 H 0.096 0.904 32 H 0.176 0.824 33 H 0.160 0.840 34 H 0.238 0.762 35 H -0.210 1.210 36 H -0.224 1.224 37 H 0.177 0.823 38 H 0.124 0.876 39 H 0.105 0.895 40 H 0.118 0.882 41 H 0.075 0.925 42 H 0.252 0.748 43 H 0.092 0.908 44 H 0.059 0.941 45 H 0.083 0.917 46 H 0.069 0.931 47 H 0.075 0.925 48 H 0.075 0.925 49 H 0.244 0.756 50 H 0.095 0.905 51 H 0.103 0.897 52 H 0.102 0.898 53 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -2.338 2.735 9.062 9.750 hybrid contribution 0.059 -0.041 -0.751 0.754 sum -2.280 2.694 8.311 9.029 Atomic orbital electron populations 1.23428 0.75935 1.05648 1.02822 1.86215 1.23669 1.25827 1.87921 1.19373 0.90868 0.85998 0.96691 1.21293 1.01595 0.90091 1.05210 1.20151 0.92767 0.95788 0.97465 1.25207 1.00611 1.00662 0.91994 1.86590 1.36281 1.95632 1.16570 0.94125 0.77947 0.73587 0.88031 1.20917 0.92966 0.97335 1.03787 1.20976 0.86166 0.93177 1.04157 1.98392 1.07983 1.98308 1.96208 1.17850 0.87086 0.85679 1.08594 1.86248 1.69881 1.38223 1.28360 1.22319 1.00044 0.90117 0.85748 1.22562 0.94426 1.03496 1.02693 1.20588 0.75641 0.89106 0.84362 1.90728 1.50534 1.74103 1.29111 1.45867 1.72627 1.07461 1.09774 1.20932 0.96275 0.79282 0.99084 0.91574 1.21880 0.95101 1.01478 0.98303 1.21386 0.98181 1.00210 0.94004 1.21175 0.94651 1.00663 0.94095 0.91466 1.22324 0.82016 0.98362 0.97424 1.86446 1.19121 1.79647 1.55477 1.21513 0.92141 1.02045 0.98958 1.21778 1.00326 1.01302 0.92225 0.91611 0.86923 0.90438 0.82365 0.84037 0.76246 1.20987 1.22396 0.82281 0.87592 0.89479 0.88168 0.92460 0.74819 0.90778 0.94074 0.91659 0.93100 0.92528 0.92452 0.75582 0.90451 0.89663 0.89781 0.89695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.32 -1.99 10.28 -79.61 -0.82 -2.81 16 3 C 0.12 0.55 6.70 22.56 0.15 0.70 16 4 C -0.16 0.06 8.60 22.36 0.19 0.25 16 5 C -0.06 0.13 5.39 -19.86 -0.11 0.03 16 6 C -0.08 0.33 2.82 71.24 0.20 0.53 16 7 O -0.54 0.56 12.77 -148.98 -1.90 -1.34 16 8 Si 0.76 -3.28 29.78 68.60 2.04 -1.24 16 9 C -0.13 0.16 8.45 22.30 0.19 0.34 16 10 C -0.02 -0.05 6.24 22.39 0.14 0.09 16 11 Cl -0.04 -0.11 24.90 -2.72 -0.07 -0.18 16 12 C 0.05 0.35 5.56 22.58 0.13 0.48 16 13 O -0.31 -3.35 8.55 -67.46 -0.58 -3.92 16 14 C 0.08 0.30 3.19 29.85 0.10 0.39 16 15 C -0.17 0.14 8.35 71.98 0.60 0.75 16 16 C 0.52 3.99 7.14 87.66 0.63 4.61 16 17 O -0.57 -10.63 16.17 15.94 0.26 -10.37 16 18 N -0.70 0.15 4.19 -442.53 -1.86 -1.71 16 19 C 0.15 0.15 2.78 44.99 0.13 0.28 16 20 H 0.07 0.42 7.58 -2.39 -0.02 0.40 16 21 C -0.13 -0.42 5.60 30.59 0.17 -0.24 16 22 C -0.10 -0.07 4.94 30.59 0.15 0.09 16 23 C -0.09 0.25 2.43 -10.79 -0.03 0.23 16 24 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 25 C 0.08 -0.30 6.43 71.98 0.46 0.16 16 26 O -0.60 -0.16 13.20 -148.98 -1.97 -2.13 16 27 C -0.11 0.82 5.03 30.59 0.15 0.97 16 28 C -0.12 0.61 5.61 30.59 0.17 0.78 16 29 H 0.07 -0.24 7.68 -2.38 -0.02 -0.26 16 30 H 0.11 -0.50 8.14 -2.39 -0.02 -0.51 16 31 H 0.08 -0.50 7.65 -2.39 -0.02 -0.52 16 32 H 0.16 -0.56 6.30 -2.91 -0.02 -0.58 16 33 H 0.14 -1.07 7.96 -2.39 -0.02 -1.09 16 34 H 0.39 -2.19 8.70 -74.05 -0.64 -2.83 16 35 H -0.28 -0.12 7.11 99.48 0.71 0.58 16 36 H -0.30 -0.94 7.11 99.48 0.71 -0.23 16 37 H 0.16 -0.79 4.86 -2.91 -0.01 -0.80 16 38 H 0.11 -0.07 7.91 -2.39 -0.02 -0.09 16 39 H 0.09 -0.14 5.45 -2.39 -0.01 -0.16 16 40 H 0.10 -0.71 7.92 -2.39 -0.02 -0.73 16 41 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 42 H 0.41 -2.85 6.65 -92.71 -0.62 -3.46 16 43 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 44 H 0.04 0.38 8.14 -2.39 -0.02 0.36 16 45 H 0.06 -0.05 7.60 -2.38 -0.02 -0.06 16 46 H 0.05 0.25 7.82 -2.39 -0.02 0.23 16 47 H 0.06 -0.37 8.14 -2.39 -0.02 -0.39 16 48 H 0.06 -0.36 8.14 -2.38 -0.02 -0.38 16 49 H 0.39 -3.10 9.12 -74.06 -0.68 -3.77 16 50 H 0.08 -0.80 6.51 -2.38 -0.02 -0.82 16 51 H 0.08 -0.79 8.14 -2.39 -0.02 -0.81 16 52 H 0.08 -0.56 8.14 -2.38 -0.02 -0.58 16 53 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 Total: 0.00 -27.55 430.26 -1.28 -28.83 By element: Atomic # 1 Polarization: -15.70 SS G_CDS: -0.93 Total: -16.63 kcal Atomic # 6 Polarization: 6.96 SS G_CDS: 4.54 Total: 11.50 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -1.86 Total: -1.71 kcal Atomic # 8 Polarization: -15.56 SS G_CDS: -5.01 Total: -20.57 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.04 Total: -1.24 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.07 Total: -0.18 kcal Total: -27.55 -1.28 -28.83 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.961 kcal (2) G-P(sol) polarization free energy of solvation -27.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.830 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.790 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds