Wall clock time and date at job start Mon Mar 8 2021 02:33:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47101 * 2 1 4 4 C 1.50702 * 109.46705 * 119.99975 * 2 1 3 5 5 C 1.34852 * 125.88496 * 244.96973 * 4 2 1 6 6 C 1.40894 * 107.41420 * 180.02562 * 5 4 2 7 7 C 1.34854 * 107.41693 * 0.02562 * 6 5 4 8 8 C 1.50696 * 125.89158 * 179.97438 * 7 6 5 9 9 C 1.50706 * 109.47259 * 85.02223 * 8 7 6 10 10 O 1.21283 * 119.99503 * 0.02562 * 9 8 7 11 11 N 1.34773 * 120.00081 * 179.72770 * 9 8 7 12 12 C 1.46506 * 119.99968 * 180.02562 * 11 9 8 13 13 H 1.09000 * 109.46738 * 324.99609 * 12 11 9 14 14 C 1.52993 * 109.47171 * 84.99494 * 12 11 9 15 15 C 1.53002 * 109.47290 * 60.00189 * 14 12 11 16 16 C 1.52997 * 109.46906 * 59.99926 * 15 14 12 17 17 H 1.09002 * 109.47380 * 60.00090 * 16 15 14 18 18 C 1.52996 * 109.47138 * 180.02562 * 16 15 14 19 19 O 1.42905 * 109.46978 * 294.99863 * 18 16 15 20 20 C 1.53006 * 109.47071 * 299.99931 * 16 15 14 21 21 C 1.52994 * 109.46945 * 204.99736 * 12 11 9 22 22 N 1.36338 * 125.89282 * 65.31049 * 4 2 1 23 23 H 0.96704 * 114.00110 * 300.00345 * 1 2 3 24 24 H 1.09001 * 109.46832 * 239.99719 * 2 1 3 25 25 H 1.48507 * 109.99910 * 299.99764 * 3 2 1 26 26 H 1.48497 * 110.00456 * 61.31931 * 3 2 1 27 27 H 1.07999 * 126.29573 * 0.04964 * 5 4 2 28 28 H 1.07993 * 126.29350 * 180.02562 * 6 5 4 29 29 H 1.09001 * 109.47545 * 325.02563 * 8 7 6 30 30 H 1.08998 * 109.47669 * 205.02506 * 8 7 6 31 31 H 0.96998 * 120.00525 * 359.97438 * 11 9 8 32 32 H 1.09002 * 109.46922 * 180.02562 * 14 12 11 33 33 H 1.09007 * 109.47428 * 300.00223 * 14 12 11 34 34 H 1.09002 * 109.47028 * 299.99801 * 15 14 12 35 35 H 1.08997 * 109.47064 * 179.97438 * 15 14 12 36 36 H 1.08999 * 109.46994 * 54.99816 * 18 16 15 37 37 H 1.09003 * 109.47662 * 174.99923 * 18 16 15 38 38 H 0.96701 * 113.99399 * 179.97438 * 19 18 16 39 39 H 1.09002 * 109.47148 * 300.00301 * 20 16 15 40 40 H 1.09003 * 109.46845 * 180.02562 * 20 16 15 41 41 H 1.09006 * 109.47305 * 59.99718 * 21 12 11 42 42 H 1.09002 * 109.47025 * 179.97438 * 21 12 11 43 43 H 0.96998 * 125.63591 * 359.97137 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6305 -0.1487 2.2375 6 6 2.8983 -1.1606 3.1806 7 6 2.3530 -2.3021 2.7138 8 6 2.3943 -3.6448 3.3967 9 6 1.2627 -3.7394 4.3876 10 8 0.4978 -2.8083 4.5252 11 7 1.0972 -4.8609 5.1165 12 6 -0.0032 -4.9531 6.0793 13 1 -0.1726 -3.9761 6.5320 14 6 -1.2739 -5.4089 5.3594 15 6 -1.0361 -6.7802 4.7240 16 6 -0.6767 -7.7919 5.8140 17 1 -1.4953 -7.8605 6.5304 18 6 -0.4383 -9.1631 5.1785 19 8 -1.6572 -9.6412 4.6061 20 6 0.5942 -7.3361 6.5339 21 6 0.3564 -5.9648 7.1692 22 7 1.7627 -2.0332 1.5146 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 1.5615 2.4678 -1.2086 26 1 1.5879 2.4586 1.2242 27 1 2.9299 0.8866 2.3082 28 1 3.4406 -1.0435 4.1072 29 1 3.3445 -3.7580 3.9186 30 1 2.2924 -4.4345 2.6524 31 1 1.7062 -5.6074 5.0031 32 1 -2.0927 -5.4770 6.0758 33 1 -1.5300 -4.6881 4.5828 34 1 -0.2174 -6.7117 4.0076 35 1 -1.9416 -7.1051 4.2115 36 1 0.3193 -9.0758 4.3997 37 1 -0.0962 -9.8627 5.9413 38 1 -1.5801 -10.5079 4.1841 39 1 1.4129 -7.2675 5.8175 40 1 0.8505 -8.0571 7.3101 41 1 1.2617 -5.6400 7.6821 42 1 -0.4621 -6.0330 7.8859 43 1 1.2976 -2.6762 0.9568 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:47 Heat of formation + Delta-G solvation = -86.585705 kcal Electronic energy + Delta-G solvation = -24196.462935 eV Core-core repulsion = 20629.096285 eV Total energy + Delta-G solvation = -3567.366650 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.27484 -41.18108 -39.42224 -37.75487 -37.48996 -34.74919 -33.23844 -31.90238 -31.83659 -31.45734 -29.22480 -26.49603 -25.12279 -23.77196 -22.56908 -22.04320 -21.26778 -20.96716 -20.20375 -18.96457 -18.36484 -18.22261 -17.22702 -16.69941 -16.58875 -16.31042 -16.12552 -15.80430 -15.39186 -15.10801 -14.99255 -14.73693 -14.51555 -14.19455 -14.00376 -13.94881 -13.75650 -13.66162 -13.39186 -13.24508 -13.04641 -12.78922 -12.53584 -12.25598 -12.07757 -11.70891 -11.65597 -11.39426 -11.19706 -10.93104 -10.81641 -10.72203 -10.01399 -9.68899 -8.87946 -4.85722 1.16816 1.34064 1.69259 1.73210 1.93125 2.02734 2.34133 2.54474 3.10207 3.42663 3.55595 3.62417 3.66960 3.80234 3.87602 3.92923 4.00624 4.02619 4.16343 4.27275 4.35016 4.36153 4.37256 4.43248 4.47192 4.52283 4.58736 4.62390 4.66220 4.85768 4.88918 4.96010 5.02789 5.04078 5.21221 5.33768 5.34702 5.35447 5.38639 5.54351 6.07914 6.22796 6.44398 6.48312 6.60333 6.69180 7.27924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.056 4.056 3 Si 0.715 3.285 4 C -0.008 4.008 5 C -0.187 4.187 6 C -0.174 4.174 7 C 0.038 3.962 8 C -0.073 4.073 9 C 0.511 3.489 10 O -0.523 6.523 11 N -0.725 5.725 12 C 0.146 3.854 13 H 0.089 0.911 14 C -0.132 4.132 15 C -0.107 4.107 16 C -0.089 4.089 17 H 0.080 0.920 18 C 0.079 3.921 19 O -0.573 6.573 20 C -0.114 4.114 21 C -0.126 4.126 22 N -0.536 5.536 23 H 0.380 0.620 24 H 0.113 0.887 25 H -0.259 1.259 26 H -0.257 1.257 27 H 0.141 0.859 28 H 0.136 0.864 29 H 0.117 0.883 30 H 0.098 0.902 31 H 0.398 0.602 32 H 0.072 0.928 33 H 0.067 0.933 34 H 0.058 0.942 35 H 0.070 0.930 36 H 0.044 0.956 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.062 0.938 40 H 0.070 0.930 41 H 0.073 0.927 42 H 0.081 0.919 43 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.286 -5.163 0.863 7.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.165 4.165 3 Si 0.615 3.385 4 C -0.122 4.122 5 C -0.212 4.212 6 C -0.198 4.198 7 C -0.076 4.076 8 C -0.114 4.114 9 C 0.296 3.704 10 O -0.398 6.398 11 N -0.379 5.379 12 C 0.042 3.958 13 H 0.107 0.893 14 C -0.170 4.170 15 C -0.144 4.144 16 C -0.108 4.108 17 H 0.098 0.902 18 C 0.001 3.999 19 O -0.378 6.378 20 C -0.152 4.152 21 C -0.164 4.164 22 N -0.130 5.130 23 H 0.228 0.772 24 H 0.131 0.869 25 H -0.184 1.184 26 H -0.181 1.181 27 H 0.158 0.842 28 H 0.154 0.846 29 H 0.135 0.865 30 H 0.116 0.884 31 H 0.233 0.767 32 H 0.091 0.909 33 H 0.086 0.914 34 H 0.077 0.923 35 H 0.088 0.912 36 H 0.062 0.938 37 H 0.064 0.936 38 H 0.227 0.773 39 H 0.080 0.920 40 H 0.089 0.911 41 H 0.092 0.908 42 H 0.100 0.900 43 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 4.297 -3.472 0.559 5.553 hybrid contribution -0.766 -1.624 0.095 1.798 sum 3.532 -5.096 0.654 6.235 Atomic orbital electron populations 1.86565 1.17919 1.80253 1.49611 1.24774 0.83816 1.11472 0.96438 0.94416 0.91406 0.72548 0.80155 1.20771 1.07079 0.84359 0.99973 1.20670 1.05418 0.99633 0.95439 1.20582 1.06696 0.91679 1.00871 1.19475 1.03577 0.95851 0.88655 1.20145 0.99341 0.94370 0.97518 1.20583 0.86003 0.82273 0.81510 1.90765 1.45218 1.37508 1.66311 1.46124 1.32373 1.17573 1.41847 1.20943 0.86229 0.99837 0.88823 0.89301 1.21933 0.97263 0.97117 1.00706 1.21466 1.02019 0.93721 0.97233 1.21189 0.98538 0.93222 0.97823 0.90178 1.22232 0.86259 0.95153 0.96244 1.86485 1.34013 1.39933 1.77409 1.21519 0.96943 0.96971 0.99745 1.21810 1.02991 0.94176 0.97413 1.41799 1.44268 1.09081 1.17875 0.77213 0.86880 1.18364 1.18145 0.84154 0.84613 0.86540 0.88368 0.76670 0.90902 0.91407 0.92350 0.91173 0.93789 0.93625 0.77271 0.91971 0.91116 0.90830 0.90030 0.75164 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.38 12.88 -35.23 -0.45 -1.83 16 2 C -0.06 -0.05 3.08 36.01 0.11 0.06 16 3 Si 0.72 -0.11 30.60 -169.99 -5.20 -5.31 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.43 9.37 -39.78 -0.37 -0.80 16 6 C -0.17 -0.44 10.77 -39.78 -0.43 -0.87 16 7 C 0.04 0.06 5.66 -81.79 -0.46 -0.40 16 8 C -0.07 0.11 6.24 -29.03 -0.18 -0.07 16 9 C 0.51 0.55 7.79 -10.98 -0.09 0.46 16 10 O -0.52 -3.08 15.70 5.56 0.09 -2.99 16 11 N -0.73 1.04 4.23 -53.81 -0.23 0.82 16 12 C 0.15 -0.08 2.78 -67.93 -0.19 -0.27 16 13 H 0.09 0.14 7.58 -51.93 -0.39 -0.26 16 14 C -0.13 -0.05 5.60 -26.73 -0.15 -0.19 16 15 C -0.11 0.03 4.94 -26.73 -0.13 -0.10 16 16 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 17 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 18 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 19 O -0.57 -0.09 13.20 -35.23 -0.46 -0.55 16 20 C -0.11 0.35 5.03 -26.73 -0.13 0.22 16 21 C -0.13 0.31 5.61 -26.74 -0.15 0.16 16 22 N -0.54 -0.79 6.07 -5.44 -0.03 -0.83 16 23 H 0.38 0.20 8.70 45.56 0.40 0.60 16 24 H 0.11 -0.03 7.96 -51.93 -0.41 -0.45 16 25 H -0.26 -0.71 7.11 56.52 0.40 -0.31 16 26 H -0.26 -0.58 7.11 56.52 0.40 -0.18 16 27 H 0.14 0.10 6.24 -52.49 -0.33 -0.22 16 28 H 0.14 0.19 8.06 -52.49 -0.42 -0.24 16 29 H 0.12 -0.43 8.14 -51.93 -0.42 -0.86 16 30 H 0.10 -0.36 8.14 -51.93 -0.42 -0.79 16 31 H 0.40 -1.57 6.87 -40.82 -0.28 -1.85 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 0.17 8.14 -51.92 -0.42 -0.25 16 34 H 0.06 -0.04 7.60 -51.93 -0.39 -0.43 16 35 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 36 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 37 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.38 -1.46 9.12 45.56 0.42 -1.05 16 39 H 0.06 -0.25 6.51 -51.93 -0.34 -0.59 16 40 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 42 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 43 H 0.41 -0.04 8.96 -40.82 -0.37 -0.41 16 LS Contribution 345.95 15.07 5.21 5.21 Total: 0.00 -9.46 345.95 -9.72 -19.19 By element: Atomic # 1 Polarization: -5.42 SS G_CDS: -5.96 Total: -11.37 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: -2.69 Total: -2.33 kcal Atomic # 7 Polarization: 0.25 SS G_CDS: -0.26 Total: -0.01 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -0.83 Total: -5.38 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: -5.20 Total: -5.31 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -9.46 -9.72 -19.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.399 kcal (2) G-P(sol) polarization free energy of solvation -9.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds