Wall clock time and date at job start Mon Mar 8 2021 02:33:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86298 * 109.46952 * 2 1 4 4 C 1.50704 * 109.47193 * 240.00339 * 2 1 3 5 5 C 1.38708 * 120.02666 * 284.99893 * 4 2 1 6 6 O 1.35900 * 120.05527 * 359.97438 * 5 4 2 7 7 C 1.42901 * 116.99910 * 179.72654 * 6 5 4 8 8 C 1.50699 * 109.47143 * 180.02562 * 7 6 5 9 9 O 1.21287 * 119.99956 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00179 * 180.02562 * 8 7 6 11 11 C 1.46500 * 120.00075 * 179.97438 * 10 8 7 12 12 H 1.09002 * 109.47092 * 324.99806 * 11 10 8 13 13 C 1.52997 * 109.47007 * 84.99755 * 11 10 8 14 14 C 1.53006 * 109.47127 * 60.00219 * 13 11 10 15 15 C 1.52997 * 109.47164 * 59.99836 * 14 13 11 16 16 H 1.09001 * 109.47375 * 59.99966 * 15 14 13 17 17 C 1.52996 * 109.46975 * 180.02562 * 15 14 13 18 18 O 1.42903 * 109.47203 * 294.99757 * 17 15 14 19 19 C 1.53002 * 109.46978 * 299.99874 * 15 14 13 20 20 C 1.52996 * 109.46891 * 60.00410 * 19 15 14 21 21 C 1.38752 * 119.88975 * 179.72933 * 5 4 2 22 22 C 1.38124 * 119.94169 * 0.27162 * 21 5 4 23 23 C 1.38289 * 120.05612 * 0.02562 * 22 21 5 24 24 C 1.38168 * 120.02948 * 105.31900 * 4 2 1 25 25 H 0.96694 * 114.00438 * 299.99550 * 1 2 3 26 26 H 1.08994 * 109.47326 * 119.99847 * 2 1 3 27 27 H 1.48503 * 110.00363 * 178.68048 * 3 2 1 28 28 H 1.48499 * 110.00371 * 300.00339 * 3 2 1 29 29 H 1.08999 * 109.46801 * 60.00566 * 7 6 5 30 30 H 1.08999 * 109.47123 * 300.00431 * 7 6 5 31 31 H 0.96997 * 119.99651 * 359.97438 * 10 8 7 32 32 H 1.08998 * 109.47533 * 179.97438 * 13 11 10 33 33 H 1.08996 * 109.47853 * 300.00060 * 13 11 10 34 34 H 1.09001 * 109.47002 * 299.99574 * 14 13 11 35 35 H 1.09000 * 109.47050 * 179.97438 * 14 13 11 36 36 H 1.08998 * 109.47611 * 54.99598 * 17 15 14 37 37 H 1.09001 * 109.47165 * 175.00100 * 17 15 14 38 38 H 0.96696 * 114.00572 * 180.02562 * 18 17 15 39 39 H 1.08992 * 109.47056 * 300.00064 * 19 15 14 40 40 H 1.09004 * 109.47006 * 180.02562 * 19 15 14 41 41 H 1.09004 * 109.47368 * 179.97438 * 20 19 15 42 42 H 1.09001 * 109.47372 * 59.99964 * 20 19 15 43 43 H 1.07992 * 120.02919 * 180.29718 * 21 5 4 44 44 H 1.08004 * 119.97312 * 180.02562 * 22 21 5 45 45 H 1.08005 * 119.94269 * 179.97438 * 23 22 21 46 46 H 1.08003 * 119.97216 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.8697 -2.0939 -1.3071 6 8 1.3568 -2.8107 -0.2726 7 6 1.3191 -4.2312 -0.4232 8 6 0.7226 -4.8519 0.8137 9 8 0.3654 -4.1471 1.7339 10 7 0.5870 -6.1902 0.8979 11 6 0.0076 -6.7935 2.1005 12 1 0.3069 -6.2176 2.9762 13 6 -1.5182 -6.7932 1.9869 14 6 -1.9382 -7.6017 0.7577 15 6 -1.4376 -9.0406 0.8982 16 1 -1.8686 -9.4896 1.7931 17 6 -1.8571 -9.8489 -0.3312 18 8 -3.2821 -9.9468 -0.3733 19 6 0.0882 -9.0409 1.0118 20 6 0.5082 -8.2325 2.2410 21 6 2.3278 -2.7447 -2.4437 22 6 2.8491 -2.0140 -3.4935 23 6 2.9152 -0.6351 -3.4122 24 6 2.4598 0.0156 -2.2807 25 1 -0.3934 0.4416 0.7650 26 1 1.7923 -0.5138 0.8899 27 1 3.5345 1.7704 0.0321 28 1 1.5613 2.4680 -1.2084 29 1 2.3316 -4.6083 -0.5672 30 1 0.7089 -4.4887 -1.2889 31 1 0.8730 -6.7538 0.1621 32 1 -1.9493 -7.2425 2.8815 33 1 -1.8749 -5.7681 1.8868 34 1 -1.5072 -7.1527 -0.1372 35 1 -3.0252 -7.6018 0.6770 36 1 -1.5004 -9.3507 -1.2327 37 1 -1.4258 -10.8482 -0.2735 38 1 -3.6199 -10.4477 -1.1284 39 1 0.5192 -8.5920 0.1170 40 1 0.4449 -10.0661 1.1115 41 1 1.5952 -8.2330 2.3223 42 1 0.0771 -8.6814 3.1359 43 1 2.2765 -3.8215 -2.5076 44 1 3.2055 -2.5200 -4.3786 45 1 3.3236 -0.0655 -4.2340 46 1 2.5124 1.0926 -2.2196 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_2989392.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:33:58 Heat of formation + Delta-G solvation = -129.086280 kcal Electronic energy + Delta-G solvation = -27705.877622 eV Core-core repulsion = 23755.185587 eV Total energy + Delta-G solvation = -3950.692035 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.67996 -41.06131 -39.57206 -38.36715 -37.46671 -37.31970 -34.83084 -32.89349 -32.07843 -31.87666 -31.12819 -29.15671 -26.55825 -26.39724 -23.85705 -23.71995 -22.49695 -22.27063 -21.89056 -20.26117 -19.30033 -18.54298 -18.24696 -18.22532 -17.41785 -17.20770 -16.89064 -16.67441 -16.47121 -15.88013 -15.74153 -15.60400 -15.25247 -14.99665 -14.91904 -14.80043 -14.59004 -13.99331 -13.94126 -13.73800 -13.61641 -13.39753 -13.28404 -13.11184 -12.92223 -12.67480 -12.55862 -12.27527 -12.16681 -11.84617 -11.69256 -11.65620 -11.41095 -11.20239 -10.92685 -10.82444 -10.10273 -10.09882 -9.99865 -9.21439 -4.89314 0.19219 0.39553 1.38811 1.48383 1.54636 1.71337 2.02794 2.57894 2.64762 3.10289 3.45626 3.53512 3.58218 3.62405 3.73317 3.79937 3.82949 3.90845 3.93162 3.93771 4.10333 4.13942 4.24117 4.27058 4.31481 4.34199 4.35627 4.42043 4.47917 4.51314 4.57497 4.62481 4.64912 4.87560 4.94278 4.95115 5.00495 5.02283 5.21336 5.23596 5.31688 5.33477 5.35417 5.45471 5.46685 5.66246 6.24604 6.40901 6.61432 6.84541 7.14680 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.062 4.062 3 Si 0.683 3.317 4 C -0.102 4.102 5 C 0.153 3.847 6 O -0.276 6.276 7 C 0.038 3.962 8 C 0.517 3.483 9 O -0.509 6.509 10 N -0.721 5.721 11 C 0.148 3.852 12 H 0.092 0.908 13 C -0.133 4.133 14 C -0.108 4.108 15 C -0.089 4.089 16 H 0.081 0.919 17 C 0.079 3.921 18 O -0.573 6.573 19 C -0.115 4.115 20 C -0.126 4.126 21 C -0.211 4.211 22 C -0.072 4.072 23 C -0.151 4.151 24 C -0.084 4.084 25 H 0.380 0.620 26 H 0.074 0.926 27 H -0.255 1.255 28 H -0.250 1.250 29 H 0.092 0.908 30 H 0.093 0.907 31 H 0.399 0.601 32 H 0.075 0.925 33 H 0.070 0.930 34 H 0.058 0.942 35 H 0.071 0.929 36 H 0.044 0.956 37 H 0.045 0.955 38 H 0.380 0.620 39 H 0.061 0.939 40 H 0.071 0.929 41 H 0.073 0.927 42 H 0.083 0.917 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.129 0.871 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.212 -4.205 -1.618 5.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.173 4.173 3 Si 0.584 3.416 4 C -0.103 4.103 5 C 0.107 3.893 6 O -0.188 6.188 7 C -0.041 4.041 8 C 0.301 3.699 9 O -0.383 6.383 10 N -0.376 5.376 11 C 0.044 3.956 12 H 0.110 0.890 13 C -0.171 4.171 14 C -0.146 4.146 15 C -0.108 4.108 16 H 0.099 0.901 17 C 0.001 3.999 18 O -0.378 6.378 19 C -0.152 4.152 20 C -0.164 4.164 21 C -0.229 4.229 22 C -0.091 4.091 23 C -0.169 4.169 24 C -0.102 4.102 25 H 0.227 0.773 26 H 0.092 0.908 27 H -0.180 1.180 28 H -0.175 1.175 29 H 0.110 0.890 30 H 0.111 0.889 31 H 0.234 0.766 32 H 0.093 0.907 33 H 0.089 0.911 34 H 0.077 0.923 35 H 0.090 0.910 36 H 0.062 0.938 37 H 0.063 0.937 38 H 0.227 0.773 39 H 0.080 0.920 40 H 0.089 0.911 41 H 0.092 0.908 42 H 0.102 0.898 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.147 0.853 46 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 2.509 -2.972 -1.165 4.060 hybrid contribution 0.270 -1.480 -1.402 2.057 sum 2.779 -4.452 -2.567 5.842 Atomic orbital electron populations 1.86496 1.17050 1.81940 1.49232 1.24516 0.85968 1.09632 0.97135 0.95220 0.80811 0.78485 0.87037 1.18686 1.04490 0.90386 0.96751 1.18750 0.92976 0.90692 0.86851 1.86215 1.77477 1.16888 1.38227 1.22494 1.02422 0.81386 0.97818 1.19971 0.79108 0.82604 0.88196 1.90780 1.47636 1.61013 1.38836 1.45945 1.64704 1.06082 1.20868 1.20994 0.93159 0.93596 0.87841 0.89041 1.21953 0.94849 1.01243 0.99096 1.21480 1.01630 0.93619 0.97824 1.21193 0.95112 0.96176 0.98311 0.90099 1.22228 0.81364 0.98586 0.97711 1.86482 1.20964 1.78313 1.52043 1.21524 0.94800 1.00748 0.98169 1.21817 1.01559 0.93788 0.99217 1.21285 1.06432 1.00465 0.94767 1.21012 0.96359 0.93914 0.97769 1.21033 1.02876 0.94721 0.98286 1.20877 0.97333 0.99231 0.92714 0.77285 0.90783 1.17961 1.17547 0.88987 0.88947 0.76564 0.90678 0.91097 0.92338 0.90996 0.93804 0.93651 0.77259 0.92047 0.91060 0.90814 0.89802 0.85091 0.85165 0.85272 0.85476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.92 12.86 -35.23 -0.45 -2.38 16 2 C -0.06 -0.18 2.37 36.01 0.09 -0.10 16 3 Si 0.68 0.45 30.19 -169.99 -5.13 -4.68 16 4 C -0.10 -0.44 5.31 -104.47 -0.55 -1.00 16 5 C 0.15 0.59 6.66 -39.22 -0.26 0.32 16 6 O -0.28 -1.18 9.00 -39.33 -0.35 -1.54 16 7 C 0.04 0.01 5.22 36.01 0.19 0.19 16 8 C 0.52 1.00 7.87 -10.99 -0.09 0.91 16 9 O -0.51 -3.38 16.16 -14.36 -0.23 -3.61 16 10 N -0.72 0.89 4.23 -53.81 -0.23 0.66 16 11 C 0.15 -0.10 2.78 -67.93 -0.19 -0.29 16 12 H 0.09 0.10 7.58 -51.93 -0.39 -0.29 16 13 C -0.13 -0.02 5.60 -26.73 -0.15 -0.17 16 14 C -0.11 0.03 4.94 -26.73 -0.13 -0.10 16 15 C -0.09 0.13 2.43 -90.62 -0.22 -0.09 16 16 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 17 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 18 O -0.57 -0.08 13.19 -35.23 -0.46 -0.55 16 19 C -0.11 0.37 5.03 -26.73 -0.13 0.24 16 20 C -0.13 0.34 5.61 -26.73 -0.15 0.19 16 21 C -0.21 -0.28 9.04 -39.43 -0.36 -0.64 16 22 C -0.07 -0.06 10.04 -39.60 -0.40 -0.46 16 23 C -0.15 -0.27 10.04 -39.56 -0.40 -0.67 16 24 C -0.08 -0.28 8.66 -39.61 -0.34 -0.62 16 25 H 0.38 -0.49 8.74 45.56 0.40 -0.09 16 26 H 0.07 0.22 7.83 -51.93 -0.41 -0.19 16 27 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 28 H -0.25 -0.74 6.76 56.52 0.38 -0.36 16 29 H 0.09 -0.23 7.66 -51.93 -0.40 -0.63 16 30 H 0.09 -0.18 7.66 -51.93 -0.40 -0.58 16 31 H 0.40 -1.57 6.87 -40.82 -0.28 -1.85 16 32 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 34 H 0.06 -0.03 7.60 -51.93 -0.39 -0.42 16 35 H 0.07 0.11 7.82 -51.93 -0.41 -0.30 16 36 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 39 H 0.06 -0.26 6.50 -51.93 -0.34 -0.60 16 40 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 41 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 43 H 0.13 -0.21 6.30 -52.49 -0.33 -0.54 16 44 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 45 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 46 H 0.13 0.33 4.90 -52.48 -0.26 0.08 16 LS Contribution 367.36 15.07 5.54 5.54 Total: 0.00 -10.74 367.36 -10.42 -21.16 By element: Atomic # 1 Polarization: -6.21 SS G_CDS: -6.23 Total: -12.45 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -2.86 Total: -2.16 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.23 Total: 0.66 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -1.50 Total: -8.07 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: -5.13 Total: -4.68 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -10.74 -10.42 -21.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_2989392.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.923 kcal (2) G-P(sol) polarization free energy of solvation -10.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds