Wall clock time and date at job start Mon Mar 8 2021 02:34:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47004 * 2 1 4 4 C 1.50706 * 109.47147 * 119.99485 * 2 1 3 5 5 C 1.38258 * 119.94528 * 244.72952 * 4 2 1 6 6 C 1.38146 * 120.05422 * 179.72537 * 5 4 2 7 7 C 1.38731 * 119.94413 * 0.54550 * 6 5 4 8 8 O 1.35904 * 120.05682 * 179.75014 * 7 6 5 9 9 C 1.42900 * 116.99972 * 359.97438 * 8 7 6 10 10 C 1.52992 * 109.47114 * 179.97438 * 9 8 7 11 11 C 1.50695 * 109.47231 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00418 * 0.02562 * 11 10 9 13 13 N 1.34781 * 119.99893 * 180.02562 * 11 10 9 14 14 C 1.46500 * 119.99682 * 180.02562 * 13 11 10 15 15 H 1.09000 * 109.47504 * 324.99755 * 14 13 11 16 16 C 1.53002 * 109.47657 * 85.00078 * 14 13 11 17 17 C 1.53001 * 109.46934 * 59.99523 * 16 14 13 18 18 C 1.53002 * 109.47153 * 60.00408 * 17 16 14 19 19 H 1.08997 * 109.46704 * 59.99478 * 18 17 16 20 20 C 1.52994 * 109.47224 * 179.97438 * 18 17 16 21 21 O 1.42903 * 109.47094 * 295.00007 * 20 18 17 22 22 C 1.53000 * 109.46883 * 300.00016 * 18 17 16 23 23 C 1.53001 * 109.47239 * 60.00037 * 22 18 17 24 24 C 1.38733 * 119.88899 * 359.72882 * 7 6 5 25 25 C 1.38152 * 119.94016 * 359.97438 * 24 7 6 26 26 H 0.96695 * 114.00385 * 299.99841 * 1 2 3 27 27 H 1.09000 * 109.47736 * 240.00116 * 2 1 3 28 28 H 1.48504 * 109.99999 * 299.99533 * 3 2 1 29 29 H 1.48501 * 110.00135 * 61.31516 * 3 2 1 30 30 H 1.08007 * 119.97408 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.02729 * 180.28121 * 6 5 4 32 32 H 1.08999 * 109.47032 * 300.00323 * 9 8 7 33 33 H 1.09004 * 109.46743 * 59.99949 * 9 8 7 34 34 H 1.08997 * 109.47682 * 300.00930 * 10 9 8 35 35 H 1.09004 * 109.47222 * 60.00408 * 10 9 8 36 36 H 0.96997 * 120.00320 * 0.02562 * 13 11 10 37 37 H 1.08997 * 109.47333 * 180.02562 * 16 14 13 38 38 H 1.09007 * 109.46532 * 299.99800 * 16 14 13 39 39 H 1.09002 * 109.47353 * 300.00238 * 17 16 14 40 40 H 1.09002 * 109.47101 * 180.02562 * 17 16 14 41 41 H 1.09002 * 109.47119 * 55.00244 * 20 18 17 42 42 H 1.08990 * 109.47139 * 175.00364 * 20 18 17 43 43 H 0.96702 * 113.99939 * 179.97438 * 21 20 18 44 44 H 1.08997 * 109.47012 * 299.99274 * 22 18 17 45 45 H 1.09007 * 109.46548 * 179.97438 * 22 18 17 46 46 H 1.09005 * 109.46673 * 179.97438 * 23 22 18 47 47 H 1.09002 * 109.47353 * 59.99968 * 23 22 18 48 48 H 1.07994 * 120.02980 * 179.97438 * 24 7 6 49 49 H 1.07998 * 119.96619 * 180.02562 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6435 -0.0121 2.1881 6 6 3.1002 -0.6597 3.3196 7 6 2.8534 -2.0143 3.4894 8 8 3.3059 -2.6548 4.5993 9 6 4.0296 -1.8715 5.5506 10 6 4.4542 -2.7577 6.7233 11 6 5.2168 -1.9316 7.7268 12 8 5.4020 -0.7502 7.5243 13 7 5.6930 -2.5056 8.8494 14 6 6.4338 -1.7023 9.8252 15 1 7.0238 -0.9492 9.3029 16 6 5.4488 -1.0126 10.7712 17 6 4.6207 -2.0698 11.5044 18 6 5.5514 -2.9778 12.3108 19 1 6.1027 -2.3801 13.0367 20 6 4.7233 -4.0345 13.0444 21 8 3.8862 -3.3969 14.0113 22 6 6.5365 -3.6674 11.3648 23 6 7.3646 -2.6102 10.6316 24 6 2.1434 -2.7139 2.5245 25 6 1.6836 -2.0603 1.3976 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5615 2.4679 -1.2086 29 1 1.5877 2.4586 1.2242 30 1 2.8396 1.0414 2.0532 31 1 3.6526 -0.1129 4.0695 32 1 4.9145 -1.4487 5.0751 33 1 3.3935 -1.0655 5.9165 34 1 3.5690 -3.1802 7.1986 35 1 5.0901 -3.5640 6.3578 36 1 5.5452 -3.4505 9.0113 37 1 6.0000 -0.4147 11.4969 38 1 4.7857 -0.3658 10.1967 39 1 4.0694 -2.6674 10.7784 40 1 3.9186 -1.5785 12.1780 41 1 4.1044 -4.5736 12.3271 42 1 5.3906 -4.7346 13.5470 43 1 3.3313 -4.0079 14.5152 44 1 5.9853 -4.2650 10.6388 45 1 7.1999 -4.3139 11.9394 46 1 8.0668 -3.1017 9.9580 47 1 7.9159 -2.0126 11.3576 48 1 1.9503 -3.7685 2.6541 49 1 1.1304 -2.6044 0.6463 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_4549602.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:04 Heat of formation + Delta-G solvation = -143.284719 kcal Electronic energy + Delta-G solvation = -28575.953730 eV Core-core repulsion = 24469.108385 eV Total energy + Delta-G solvation = -4106.845344 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.53896 -41.12839 -39.69290 -39.06745 -37.56832 -37.21363 -34.84045 -33.47749 -32.10461 -31.91698 -31.65907 -31.06712 -26.90094 -26.30618 -25.46046 -23.80853 -23.56715 -22.33910 -22.13980 -21.70025 -20.26501 -19.52438 -18.40885 -18.34244 -17.88553 -17.49818 -17.19362 -16.83265 -16.55531 -16.34812 -16.06421 -15.95694 -15.88530 -15.54015 -15.18264 -14.97774 -14.69951 -14.66807 -14.38699 -14.20689 -14.07036 -13.96618 -13.51093 -13.40330 -13.30069 -13.13232 -12.90229 -12.81398 -12.56302 -12.27900 -12.15308 -12.03106 -11.78380 -11.67478 -11.50951 -11.42526 -11.21656 -10.96145 -10.93458 -10.53305 -10.10885 -9.98040 -9.15888 -4.92459 0.34558 0.36915 1.33316 1.54611 1.62666 1.70645 1.99589 2.47803 2.71202 3.09377 3.43433 3.49197 3.54526 3.60702 3.72992 3.77723 3.81879 3.85895 3.87287 3.93358 3.99893 4.12968 4.25887 4.27520 4.31963 4.33608 4.34082 4.39822 4.42051 4.49985 4.56547 4.57625 4.58516 4.62961 4.65088 4.77587 4.86648 4.93626 4.99370 5.00876 5.00990 5.18388 5.23236 5.32051 5.33170 5.34462 5.46454 5.54609 5.76141 6.35087 6.40445 6.45261 6.60335 7.11815 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.682 3.318 4 C -0.157 4.157 5 C -0.077 4.077 6 C -0.203 4.203 7 C 0.138 3.862 8 O -0.316 6.316 9 C 0.074 3.926 10 C -0.142 4.142 11 C 0.520 3.480 12 O -0.538 6.538 13 N -0.721 5.721 14 C 0.145 3.855 15 H 0.091 0.909 16 C -0.132 4.132 17 C -0.108 4.108 18 C -0.089 4.089 19 H 0.080 0.920 20 C 0.079 3.921 21 O -0.573 6.573 22 C -0.115 4.115 23 C -0.126 4.126 24 C -0.151 4.151 25 C -0.053 4.053 26 H 0.376 0.624 27 H 0.117 0.883 28 H -0.257 1.257 29 H -0.261 1.261 30 H 0.129 0.871 31 H 0.134 0.866 32 H 0.074 0.926 33 H 0.072 0.928 34 H 0.106 0.894 35 H 0.107 0.893 36 H 0.400 0.600 37 H 0.074 0.926 38 H 0.069 0.931 39 H 0.059 0.941 40 H 0.071 0.929 41 H 0.044 0.956 42 H 0.045 0.955 43 H 0.381 0.619 44 H 0.062 0.938 45 H 0.071 0.929 46 H 0.073 0.927 47 H 0.082 0.918 48 H 0.133 0.867 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.060 -4.539 3.079 6.280 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.584 3.416 4 C -0.157 4.157 5 C -0.094 4.094 6 C -0.221 4.221 7 C 0.093 3.907 8 O -0.230 6.230 9 C -0.001 4.001 10 C -0.182 4.182 11 C 0.306 3.694 12 O -0.415 6.415 13 N -0.374 5.374 14 C 0.041 3.959 15 H 0.109 0.891 16 C -0.171 4.171 17 C -0.145 4.145 18 C -0.108 4.108 19 H 0.098 0.902 20 C 0.001 3.999 21 O -0.379 6.379 22 C -0.152 4.152 23 C -0.164 4.164 24 C -0.170 4.170 25 C -0.071 4.071 26 H 0.223 0.777 27 H 0.135 0.865 28 H -0.183 1.183 29 H -0.186 1.186 30 H 0.146 0.854 31 H 0.152 0.848 32 H 0.092 0.908 33 H 0.091 0.909 34 H 0.124 0.876 35 H 0.125 0.875 36 H 0.236 0.764 37 H 0.092 0.908 38 H 0.088 0.912 39 H 0.077 0.923 40 H 0.089 0.911 41 H 0.062 0.938 42 H 0.064 0.936 43 H 0.228 0.772 44 H 0.080 0.920 45 H 0.089 0.911 46 H 0.092 0.908 47 H 0.101 0.899 48 H 0.151 0.849 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 3.365 -2.816 2.206 4.911 hybrid contribution -1.316 -1.068 1.014 1.975 sum 2.049 -3.885 3.221 5.446 Atomic orbital electron populations 1.86592 1.17866 1.79952 1.49318 1.24932 0.83822 1.10745 0.98395 0.95010 0.91755 0.74734 0.80092 1.20166 1.02683 0.95117 0.97752 1.20850 0.96196 0.99423 0.92966 1.21270 1.06361 0.93897 1.00612 1.18997 0.94064 0.90937 0.86724 1.85976 1.69118 1.38570 1.29361 1.22424 0.96400 0.93285 0.88022 1.21476 1.02194 0.99654 0.94902 1.20269 0.79070 0.88027 0.81989 1.90749 1.57800 1.16015 1.76901 1.46086 1.57061 1.13458 1.20784 1.20993 0.92578 0.93484 0.88875 0.89143 1.21943 0.98649 0.98107 0.98361 1.21478 0.97674 0.96992 0.98405 1.21187 0.96052 0.96604 0.96939 0.90159 1.22227 0.92603 0.94465 0.90607 1.86480 1.58627 1.38586 1.54158 1.21524 0.97711 0.97807 0.98201 1.21816 0.97565 0.97684 0.99348 1.20504 1.01822 1.00818 0.93826 1.20836 0.96539 0.93459 0.96264 0.77693 0.86506 1.18258 1.18613 0.85354 0.84812 0.90786 0.90943 0.87606 0.87510 0.76399 0.90784 0.91241 0.92273 0.91070 0.93753 0.93636 0.77245 0.91962 0.91076 0.90827 0.89921 0.84882 0.84932 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.97 12.83 -35.23 -0.45 -1.42 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.68 -0.16 29.87 -169.99 -5.08 -5.23 16 4 C -0.16 -0.15 5.35 -104.60 -0.56 -0.71 16 5 C -0.08 -0.06 8.66 -39.61 -0.34 -0.40 16 6 C -0.20 -0.28 9.04 -39.43 -0.36 -0.63 16 7 C 0.14 0.27 6.69 -39.22 -0.26 0.01 16 8 O -0.32 -0.51 10.14 -19.44 -0.20 -0.70 16 9 C 0.07 0.01 4.03 37.15 0.15 0.16 16 10 C -0.14 0.27 6.07 -27.89 -0.17 0.10 16 11 C 0.52 0.07 7.79 -10.99 -0.09 -0.02 16 12 O -0.54 -2.18 15.64 5.56 0.09 -2.09 16 13 N -0.72 1.40 4.23 -53.80 -0.23 1.18 16 14 C 0.14 -0.18 2.78 -67.93 -0.19 -0.37 16 15 H 0.09 0.04 7.58 -51.93 -0.39 -0.35 16 16 C -0.13 0.05 5.60 -26.73 -0.15 -0.10 16 17 C -0.11 0.07 4.94 -26.73 -0.13 -0.06 16 18 C -0.09 0.15 2.43 -90.62 -0.22 -0.07 16 19 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 20 C 0.08 -0.13 6.43 37.15 0.24 0.11 16 21 O -0.57 0.00 13.19 -35.23 -0.46 -0.47 16 22 C -0.11 0.38 5.03 -26.73 -0.13 0.25 16 23 C -0.13 0.37 5.61 -26.73 -0.15 0.22 16 24 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 25 C -0.05 -0.06 9.68 -39.60 -0.38 -0.44 16 26 H 0.38 -0.32 8.70 45.56 0.40 0.08 16 27 H 0.12 -0.05 7.96 -51.93 -0.41 -0.46 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 29 H -0.26 -0.46 7.01 56.52 0.40 -0.06 16 30 H 0.13 -0.09 4.84 -52.48 -0.25 -0.35 16 31 H 0.13 0.05 6.30 -52.49 -0.33 -0.28 16 32 H 0.07 0.03 7.62 -51.93 -0.40 -0.36 16 33 H 0.07 0.05 7.62 -51.93 -0.40 -0.35 16 34 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 35 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.40 -1.67 6.87 -40.82 -0.28 -1.95 16 37 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 38 H 0.07 0.11 8.14 -51.92 -0.42 -0.32 16 39 H 0.06 -0.05 7.60 -51.93 -0.39 -0.45 16 40 H 0.07 0.08 7.82 -51.93 -0.41 -0.33 16 41 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.38 -1.50 9.12 45.56 0.42 -1.09 16 44 H 0.06 -0.26 6.51 -51.93 -0.34 -0.60 16 45 H 0.07 -0.26 8.14 -51.92 -0.42 -0.68 16 46 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 47 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 49 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 LS Contribution 389.02 15.07 5.86 5.86 Total: 0.00 -8.37 389.02 -10.58 -18.95 By element: Atomic # 1 Polarization: -6.51 SS G_CDS: -7.07 Total: -13.57 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -3.04 Total: -2.49 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -0.23 Total: 1.18 kcal Atomic # 8 Polarization: -3.66 SS G_CDS: -1.03 Total: -4.69 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.08 Total: -5.23 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.37 -10.58 -18.95 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549602.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.337 kcal (2) G-P(sol) polarization free energy of solvation -8.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.575 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds