Wall clock time and date at job start Mon Mar 8 2021 02:34:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86305 * 109.47324 * 2 1 4 4 C 1.50700 * 109.47276 * 120.00334 * 2 1 3 5 5 C 1.38249 * 119.96998 * 245.00311 * 4 2 1 6 6 C 1.38287 * 120.10795 * 179.97438 * 5 4 2 7 7 C 1.38118 * 120.06059 * 359.97438 * 6 5 4 8 8 C 1.38756 * 119.94179 * 0.02562 * 7 6 5 9 9 O 1.35900 * 120.05565 * 179.97438 * 8 7 6 10 10 C 1.42903 * 116.99968 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47024 * 179.97438 * 10 9 8 12 12 C 1.50705 * 109.47273 * 179.97438 * 11 10 9 13 13 O 1.21278 * 119.99744 * 359.97438 * 12 11 10 14 14 N 1.34768 * 120.00177 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00056 * 179.97438 * 14 12 11 16 16 H 1.09001 * 109.46596 * 35.00394 * 15 14 12 17 17 C 1.53006 * 109.47249 * 154.99998 * 15 14 12 18 18 C 1.52999 * 109.46626 * 60.00049 * 17 15 14 19 19 C 1.52997 * 109.46991 * 60.00378 * 18 17 15 20 20 H 1.09000 * 109.47611 * 59.99933 * 19 18 17 21 21 C 1.53002 * 109.47143 * 179.97438 * 19 18 17 22 22 O 1.42903 * 109.47280 * 294.99993 * 21 19 18 23 23 C 1.52996 * 109.47131 * 299.99311 * 19 18 17 24 24 C 1.52997 * 109.47473 * 275.00296 * 15 14 12 25 25 C 1.38158 * 119.97499 * 65.29464 * 4 2 1 26 26 H 0.96707 * 113.99922 * 300.00323 * 1 2 3 27 27 H 1.08997 * 109.47353 * 239.99920 * 2 1 3 28 28 H 1.48500 * 110.00103 * 178.68174 * 3 2 1 29 29 H 1.48498 * 109.99890 * 300.00236 * 3 2 1 30 30 H 1.08003 * 119.94552 * 359.97438 * 5 4 2 31 31 H 1.08005 * 119.96666 * 180.02562 * 6 5 4 32 32 H 1.08003 * 120.03275 * 180.02562 * 7 6 5 33 33 H 1.08996 * 109.47266 * 59.99279 * 10 9 8 34 34 H 1.08998 * 109.46941 * 299.99620 * 10 9 8 35 35 H 1.08996 * 109.47573 * 59.99608 * 11 10 9 36 36 H 1.09006 * 109.46799 * 299.99898 * 11 10 9 37 37 H 0.97007 * 120.00298 * 0.02562 * 14 12 11 38 38 H 1.08993 * 109.46955 * 180.02562 * 17 15 14 39 39 H 1.09000 * 109.47050 * 300.00351 * 17 15 14 40 40 H 1.09002 * 109.46719 * 180.02562 * 18 17 15 41 41 H 1.08993 * 109.47839 * 299.99931 * 18 17 15 42 42 H 1.09000 * 109.47173 * 55.00063 * 21 19 18 43 43 H 1.09002 * 109.47125 * 175.00124 * 21 19 18 44 44 H 0.96699 * 113.99746 * 180.02562 * 22 21 19 45 45 H 1.08996 * 109.47452 * 300.00000 * 23 19 18 46 46 H 1.09000 * 109.47054 * 180.02562 * 23 19 18 47 47 H 1.09002 * 109.47153 * 59.99757 * 24 15 14 48 48 H 1.08996 * 109.46952 * 179.97438 * 24 15 14 49 49 H 1.08002 * 120.03027 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.6387 -0.0117 2.1909 6 6 3.1005 -0.6607 3.3214 7 6 2.8556 -2.0090 3.4937 8 6 2.1459 -2.7126 2.5311 9 8 1.9041 -4.0394 2.6980 10 6 2.4095 -4.6461 3.8891 11 6 2.0412 -6.1311 3.9008 12 6 2.5747 -6.7711 5.1565 13 8 3.1894 -6.1052 5.9625 14 7 2.3688 -8.0834 5.3839 15 6 2.8879 -8.7057 6.6043 16 1 2.8339 -7.9926 7.4269 17 6 2.0499 -9.9401 6.9436 18 6 2.1256 -10.9409 5.7889 19 6 3.5814 -11.3574 5.5697 20 1 3.9677 -11.8204 6.4777 21 6 3.6571 -12.3587 4.4153 22 8 2.9715 -13.5585 4.7797 23 6 4.4194 -10.1231 5.2304 24 6 4.3437 -9.1222 6.3851 25 6 1.6898 -2.0608 1.3947 26 1 -0.3933 0.4418 0.7651 27 1 1.7923 -0.5138 -0.8899 28 1 3.5346 1.7703 0.0321 29 1 1.5615 2.4679 -1.2084 30 1 2.8309 1.0428 2.0583 31 1 3.6525 -0.1125 4.0705 32 1 3.2162 -2.5153 4.3769 33 1 1.9726 -4.1569 4.7596 34 1 3.4939 -4.5401 3.9189 35 1 2.4778 -6.6206 3.0302 36 1 0.9567 -6.2367 3.8712 37 1 1.8775 -8.6162 4.7390 38 1 2.4359 -10.4027 7.8519 39 1 1.0128 -9.6434 7.0999 40 1 1.5283 -11.8201 6.0304 41 1 1.7395 -10.4781 4.8809 42 1 3.1902 -11.9281 3.5295 43 1 4.7010 -12.5877 4.2008 44 1 2.9794 -14.2398 4.0935 45 1 4.0333 -9.6601 4.3223 46 1 5.4565 -10.4199 5.0737 47 1 4.9407 -8.2428 6.1434 48 1 4.7300 -9.5847 7.2933 49 1 1.1416 -2.6074 0.6416 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_4549614.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:08 Heat of formation + Delta-G solvation = -143.841502 kcal Electronic energy + Delta-G solvation = -28583.322227 eV Core-core repulsion = 24476.452738 eV Total energy + Delta-G solvation = -4106.869488 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.53784 -41.12956 -39.68758 -39.00952 -37.55932 -37.21875 -34.84600 -33.42816 -32.42902 -31.94435 -31.56347 -30.60915 -27.07958 -26.57669 -25.26633 -23.78835 -23.63701 -22.44495 -22.08137 -21.57818 -20.26806 -19.34636 -18.35960 -18.21367 -17.66155 -17.48898 -17.20584 -17.01653 -16.70614 -16.54360 -16.12883 -15.96286 -15.83916 -15.33568 -15.18381 -15.05122 -14.85071 -14.61995 -14.36240 -14.12563 -14.09337 -13.91394 -13.40135 -13.31520 -13.23837 -13.09021 -12.93970 -12.81008 -12.62406 -12.34669 -12.26745 -11.94878 -11.79603 -11.63798 -11.59487 -11.42145 -11.21104 -10.98766 -10.93676 -10.45542 -10.11585 -9.89099 -9.20566 -5.00941 0.25460 0.44658 1.29367 1.54337 1.66166 1.71671 1.99329 2.48849 2.71722 3.11259 3.47904 3.49904 3.56005 3.60507 3.67384 3.76358 3.82259 3.85166 3.92507 4.00986 4.08041 4.13093 4.23065 4.25440 4.28414 4.30394 4.34381 4.38153 4.38460 4.52294 4.54868 4.57759 4.59925 4.61603 4.65228 4.72870 4.86937 4.97961 4.99859 5.01053 5.04078 5.11232 5.29309 5.30411 5.31676 5.41621 5.45481 5.47949 5.72247 6.36005 6.41796 6.58427 6.59562 7.11652 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.069 4.069 3 Si 0.691 3.309 4 C -0.083 4.083 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.133 3.867 9 O -0.317 6.317 10 C 0.075 3.925 11 C -0.143 4.143 12 C 0.521 3.479 13 O -0.539 6.539 14 N -0.721 5.721 15 C 0.145 3.855 16 H 0.090 0.910 17 C -0.129 4.129 18 C -0.111 4.111 19 C -0.089 4.089 20 H 0.080 0.920 21 C 0.078 3.922 22 O -0.573 6.573 23 C -0.112 4.112 24 C -0.129 4.129 25 C -0.126 4.126 26 H 0.380 0.620 27 H 0.114 0.886 28 H -0.258 1.258 29 H -0.255 1.255 30 H 0.128 0.872 31 H 0.131 0.869 32 H 0.133 0.867 33 H 0.073 0.927 34 H 0.072 0.928 35 H 0.106 0.894 36 H 0.107 0.893 37 H 0.401 0.599 38 H 0.081 0.919 39 H 0.071 0.929 40 H 0.076 0.924 41 H 0.057 0.943 42 H 0.044 0.956 43 H 0.045 0.955 44 H 0.381 0.619 45 H 0.063 0.937 46 H 0.065 0.935 47 H 0.071 0.929 48 H 0.075 0.925 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.529 -1.976 0.659 2.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.180 4.180 3 Si 0.593 3.407 4 C -0.083 4.083 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.231 6.231 10 C 0.000 4.000 11 C -0.183 4.183 12 C 0.307 3.693 13 O -0.416 6.416 14 N -0.374 5.374 15 C 0.041 3.959 16 H 0.108 0.892 17 C -0.167 4.167 18 C -0.149 4.149 19 C -0.107 4.107 20 H 0.098 0.902 21 C 0.001 3.999 22 O -0.379 6.379 23 C -0.150 4.150 24 C -0.168 4.168 25 C -0.144 4.144 26 H 0.227 0.773 27 H 0.132 0.868 28 H -0.182 1.182 29 H -0.180 1.180 30 H 0.146 0.854 31 H 0.149 0.851 32 H 0.150 0.850 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.124 0.876 36 H 0.125 0.875 37 H 0.237 0.763 38 H 0.100 0.900 39 H 0.090 0.910 40 H 0.094 0.906 41 H 0.076 0.924 42 H 0.063 0.937 43 H 0.064 0.936 44 H 0.228 0.772 45 H 0.082 0.918 46 H 0.084 0.916 47 H 0.089 0.911 48 H 0.093 0.907 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 0.289 -1.017 0.700 1.268 hybrid contribution 0.176 -1.292 -0.820 1.540 sum 0.465 -2.309 -0.119 2.358 Atomic orbital electron populations 1.86513 1.16938 1.81731 1.49220 1.25104 0.85354 1.10226 0.97305 0.94644 0.81108 0.77905 0.87093 1.20125 0.97993 0.93679 0.96505 1.20909 1.01604 0.99476 0.95186 1.20933 0.97522 0.93698 0.96959 1.21396 1.04112 0.95979 1.00602 1.18964 0.95138 0.82680 0.94485 1.85977 1.74472 1.20283 1.42319 1.22410 0.99641 0.91840 0.86148 1.21481 1.04271 0.95065 0.97436 1.20271 0.79517 0.82145 0.87406 1.90746 1.40854 1.62562 1.47394 1.46103 1.57765 1.09385 1.24136 1.20995 0.93126 0.94581 0.87237 0.89152 1.21859 1.00410 0.94861 0.99546 1.21522 0.96256 0.99141 0.97948 1.21187 0.96305 0.94460 0.98777 0.90153 1.22234 0.95475 0.85494 0.96728 1.86469 1.78462 1.26842 1.46129 1.21482 0.99907 0.94816 0.98746 1.21898 0.96328 0.99341 0.99228 1.20244 1.03350 0.93714 0.97137 0.77313 0.86821 1.18240 1.17976 0.85419 0.85127 0.84963 0.90882 0.90969 0.87609 0.87496 0.76324 0.90028 0.90999 0.90555 0.92414 0.93726 0.93630 0.77232 0.91823 0.91584 0.91072 0.90651 0.84899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.43 12.84 -35.23 -0.45 -0.88 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.46 29.80 -169.99 -5.07 -5.53 16 4 C -0.08 -0.09 5.35 -104.65 -0.56 -0.65 16 5 C -0.15 -0.04 8.67 -39.56 -0.34 -0.38 16 6 C -0.07 -0.03 10.04 -39.61 -0.40 -0.43 16 7 C -0.20 -0.29 9.04 -39.43 -0.36 -0.64 16 8 C 0.13 0.32 6.69 -39.21 -0.26 0.06 16 9 O -0.32 -0.66 10.14 -19.43 -0.20 -0.86 16 10 C 0.08 0.04 4.03 37.16 0.15 0.18 16 11 C -0.14 0.22 6.07 -27.88 -0.17 0.06 16 12 C 0.52 0.15 7.79 -10.99 -0.09 0.06 16 13 O -0.54 -2.23 15.64 5.56 0.09 -2.14 16 14 N -0.72 1.23 4.23 -53.80 -0.23 1.01 16 15 C 0.14 -0.15 2.78 -67.93 -0.19 -0.34 16 16 H 0.09 0.06 7.58 -51.93 -0.39 -0.33 16 17 C -0.13 0.27 5.61 -26.73 -0.15 0.12 16 18 C -0.11 0.21 4.93 -26.73 -0.13 0.08 16 19 C -0.09 0.13 2.43 -90.62 -0.22 -0.09 16 20 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 21 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 22 O -0.57 0.14 13.20 -35.23 -0.46 -0.33 16 23 C -0.11 0.20 5.05 -26.73 -0.13 0.07 16 24 C -0.13 0.12 5.60 -26.73 -0.15 -0.03 16 25 C -0.13 -0.28 9.63 -39.44 -0.38 -0.66 16 26 H 0.38 -1.17 8.70 45.56 0.40 -0.77 16 27 H 0.11 0.09 7.96 -51.93 -0.41 -0.33 16 28 H -0.26 -0.45 7.11 56.52 0.40 -0.04 16 29 H -0.25 -0.63 7.11 56.52 0.40 -0.23 16 30 H 0.13 -0.24 4.90 -52.48 -0.26 -0.50 16 31 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 32 H 0.13 0.06 6.30 -52.48 -0.33 -0.27 16 33 H 0.07 0.06 7.62 -51.93 -0.40 -0.34 16 34 H 0.07 0.06 7.62 -51.93 -0.40 -0.33 16 35 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 36 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.40 -1.49 6.87 -40.82 -0.28 -1.78 16 38 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 39 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 40 H 0.08 -0.04 7.82 -51.93 -0.41 -0.45 16 41 H 0.06 -0.16 6.50 -51.93 -0.34 -0.50 16 42 H 0.04 -0.11 8.14 -51.93 -0.42 -0.53 16 43 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 44 H 0.38 -1.56 9.12 45.56 0.42 -1.15 16 45 H 0.06 -0.13 7.60 -51.93 -0.39 -0.52 16 46 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 47 H 0.07 0.06 8.14 -51.93 -0.42 -0.37 16 48 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 49 H 0.13 0.29 8.06 -52.49 -0.42 -0.14 16 LS Contribution 389.11 15.07 5.86 5.86 Total: 0.00 -8.56 389.11 -10.56 -19.12 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -7.06 Total: -13.85 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -3.04 Total: -2.40 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.23 Total: 1.01 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.03 Total: -4.21 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.07 Total: -5.53 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.56 -10.56 -19.12 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549614.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.726 kcal (2) G-P(sol) polarization free energy of solvation -8.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.281 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.560 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.115 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds