Wall clock time and date at job start Mon Mar 8 2021 02:34:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86305 * 109.46859 * 2 1 4 4 C 1.50698 * 109.46876 * 240.00187 * 2 1 3 5 5 C 1.38248 * 119.96937 * 120.02621 * 4 2 1 6 6 C 1.38290 * 120.11010 * 179.97438 * 5 4 2 7 7 C 1.38129 * 120.05525 * 359.75937 * 6 5 4 8 8 C 1.38749 * 119.94059 * 0.51226 * 7 6 5 9 9 O 1.35902 * 120.05489 * 179.74280 * 8 7 6 10 10 C 1.42901 * 116.99954 * 359.72375 * 9 8 7 11 11 C 1.52996 * 109.47176 * 179.97438 * 10 9 8 12 12 C 1.53001 * 109.47401 * 180.02562 * 11 10 9 13 13 C 1.50696 * 109.47475 * 180.02562 * 12 11 10 14 14 O 1.21281 * 119.99939 * 359.97438 * 13 12 11 15 15 N 1.34781 * 120.00010 * 180.02562 * 13 12 11 16 16 C 1.46496 * 119.99733 * 180.02562 * 15 13 12 17 17 H 1.08996 * 109.47366 * 324.99273 * 16 15 13 18 18 C 1.53002 * 109.47428 * 84.99959 * 16 15 13 19 19 C 1.52992 * 109.47106 * 59.99803 * 18 16 15 20 20 C 1.52997 * 109.47482 * 60.00162 * 19 18 16 21 21 H 1.09002 * 109.47153 * 59.99783 * 20 19 18 22 22 C 1.53000 * 109.47060 * 180.02562 * 20 19 18 23 23 O 1.42905 * 109.46848 * 294.99674 * 22 20 19 24 24 C 1.53002 * 109.46817 * 300.00014 * 20 19 18 25 25 C 1.52997 * 109.47415 * 59.99873 * 24 20 19 26 26 C 1.38168 * 119.97492 * 299.99587 * 4 2 1 27 27 H 0.96700 * 113.99603 * 299.99745 * 1 2 3 28 28 H 1.08995 * 109.46879 * 120.00120 * 2 1 3 29 29 H 1.48496 * 110.00273 * 299.99910 * 3 2 1 30 30 H 1.48497 * 109.99833 * 61.32008 * 3 2 1 31 31 H 1.07994 * 119.94871 * 359.96682 * 5 4 2 32 32 H 1.07997 * 119.97605 * 180.02562 * 6 5 4 33 33 H 1.07997 * 120.02923 * 180.28212 * 7 6 5 34 34 H 1.09001 * 109.46845 * 60.00257 * 10 9 8 35 35 H 1.08994 * 109.47209 * 300.00304 * 10 9 8 36 36 H 1.09001 * 109.46909 * 60.00436 * 11 10 9 37 37 H 1.08994 * 109.47414 * 300.00318 * 11 10 9 38 38 H 1.09001 * 109.46912 * 60.00219 * 12 11 10 39 39 H 1.09007 * 109.47155 * 300.00255 * 12 11 10 40 40 H 0.97001 * 119.99631 * 359.97438 * 15 13 12 41 41 H 1.09002 * 109.47070 * 179.97438 * 18 16 15 42 42 H 1.08996 * 109.46550 * 299.99398 * 18 16 15 43 43 H 1.09002 * 109.47103 * 299.99915 * 19 18 16 44 44 H 1.08998 * 109.46862 * 180.02562 * 19 18 16 45 45 H 1.08990 * 109.47170 * 54.99895 * 22 20 19 46 46 H 1.09001 * 109.46952 * 174.99972 * 22 20 19 47 47 H 0.96698 * 113.99578 * 180.02562 * 23 22 20 48 48 H 1.09000 * 109.46986 * 179.97438 * 24 20 19 49 49 H 1.09002 * 109.47075 * 299.99262 * 24 20 19 50 50 H 1.09002 * 109.47045 * 59.99931 * 25 24 20 51 51 H 1.08998 * 109.47171 * 179.97438 * 25 24 20 52 52 H 1.07999 * 120.02175 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7266 -0.0380 -2.1398 6 6 3.1895 -0.6872 -3.2697 7 6 2.8623 -2.0111 -3.4898 8 6 2.0598 -2.6863 -2.5815 9 8 1.7321 -3.9873 -2.7985 10 6 2.2441 -4.5959 -3.9858 11 6 1.7737 -6.0500 -4.0570 12 6 2.3223 -6.7019 -5.3278 13 6 1.8586 -8.1340 -5.3983 14 8 1.1586 -8.5887 -4.5185 15 7 2.2225 -8.9098 -6.4386 16 6 1.7712 -10.3018 -6.5074 17 1 1.7280 -10.7198 -5.5017 18 6 0.3804 -10.3563 -7.1427 19 6 0.4412 -9.7696 -8.5543 20 6 1.4215 -10.5822 -9.4026 21 1 1.0858 -11.6179 -9.4538 22 6 1.4827 -9.9950 -10.8141 23 8 0.2127 -10.1510 -11.4504 24 6 2.8123 -10.5277 -8.7673 25 6 2.7516 -11.1144 -7.3556 26 6 1.5973 -2.0332 -1.4486 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 0.8899 29 1 1.5615 2.4680 -1.2084 30 1 1.5879 2.4585 1.2242 31 1 2.9866 0.9959 -1.9676 32 1 3.8109 -0.1601 -3.9784 33 1 3.2279 -2.5189 -4.3700 34 1 3.3336 -4.5673 -3.9679 35 1 1.8806 -4.0529 -4.8581 36 1 0.6842 -6.0790 -4.0746 37 1 2.1376 -6.5928 -3.1846 38 1 3.4118 -6.6729 -5.3098 39 1 1.9588 -6.1593 -6.2006 40 1 2.7827 -8.5462 -7.1421 41 1 0.0448 -11.3921 -7.1942 42 1 -0.3179 -9.7774 -6.5383 43 1 0.7770 -8.7338 -8.5032 44 1 -0.5497 -9.8080 -9.0067 45 1 1.7325 -8.9356 -10.7564 46 1 2.2453 -10.5171 -11.3921 47 1 0.1784 -9.8006 -12.3510 48 1 3.5106 -11.1069 -9.3714 49 1 3.1481 -9.4919 -8.7162 50 1 2.4158 -12.1502 -7.4068 51 1 3.7425 -11.0760 -6.9032 52 1 0.9761 -2.5579 -0.7378 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:11 Heat of formation + Delta-G solvation = -148.026299 kcal Electronic energy + Delta-G solvation = -30135.206690 eV Core-core repulsion = 25872.618116 eV Total energy + Delta-G solvation = -4262.588574 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.197 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.38819 -41.13042 -39.61478 -39.02416 -37.56292 -37.38476 -34.88377 -34.75922 -32.52680 -31.91359 -31.75595 -31.04013 -28.34808 -26.82072 -26.31204 -23.83482 -23.69734 -23.51201 -22.20007 -21.78542 -21.55949 -20.19891 -18.91253 -18.51527 -18.34728 -18.21510 -17.47939 -17.21733 -16.97029 -16.87014 -16.59151 -16.14405 -15.88112 -15.74129 -15.61191 -15.33411 -15.01956 -14.74155 -14.49463 -14.43644 -14.13854 -13.96511 -13.83722 -13.59588 -13.47677 -13.41340 -13.25101 -13.19704 -12.95976 -12.64095 -12.53836 -12.42306 -12.24150 -12.19440 -11.89389 -11.64693 -11.62599 -11.59363 -11.38574 -11.18640 -10.91918 -10.80535 -10.53244 -10.01889 -9.81218 -9.14717 -4.94635 0.28908 0.50315 1.28307 1.61379 1.67937 1.92709 1.99175 2.39383 2.70969 3.11174 3.35033 3.53917 3.60628 3.64691 3.77592 3.80736 3.83321 3.87449 3.93075 3.96803 4.09315 4.12914 4.17919 4.20780 4.27452 4.29047 4.31379 4.32556 4.36496 4.37843 4.42082 4.46707 4.53235 4.59027 4.60018 4.67183 4.69955 4.89437 4.96854 4.98922 5.03864 5.04975 5.05642 5.18637 5.23651 5.34718 5.35290 5.36886 5.44562 5.54568 5.54867 5.76408 6.45396 6.47814 6.49233 6.61523 7.25697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.078 4.078 3 Si 0.687 3.313 4 C -0.035 4.035 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.132 3.868 9 O -0.311 6.311 10 C 0.060 3.940 11 C -0.105 4.105 12 C -0.138 4.138 13 C 0.514 3.486 14 O -0.534 6.534 15 N -0.725 5.725 16 C 0.145 3.855 17 H 0.089 0.911 18 C -0.132 4.132 19 C -0.107 4.107 20 C -0.090 4.090 21 H 0.080 0.920 22 C 0.079 3.921 23 O -0.573 6.573 24 C -0.114 4.114 25 C -0.126 4.126 26 C -0.125 4.125 27 H 0.380 0.620 28 H 0.079 0.921 29 H -0.255 1.255 30 H -0.261 1.261 31 H 0.129 0.871 32 H 0.131 0.869 33 H 0.130 0.870 34 H 0.064 0.936 35 H 0.063 0.937 36 H 0.083 0.917 37 H 0.083 0.917 38 H 0.097 0.903 39 H 0.097 0.903 40 H 0.398 0.602 41 H 0.073 0.927 42 H 0.069 0.931 43 H 0.058 0.942 44 H 0.070 0.930 45 H 0.044 0.956 46 H 0.045 0.955 47 H 0.380 0.620 48 H 0.070 0.930 49 H 0.061 0.939 50 H 0.081 0.919 51 H 0.072 0.928 52 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.819 1.012 -4.205 8.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.588 3.412 4 C -0.035 4.035 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.087 3.913 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.179 4.179 13 C 0.300 3.700 14 O -0.410 6.410 15 N -0.378 5.378 16 C 0.040 3.960 17 H 0.107 0.893 18 C -0.171 4.171 19 C -0.145 4.145 20 C -0.108 4.108 21 H 0.098 0.902 22 C 0.001 3.999 23 O -0.378 6.378 24 C -0.152 4.152 25 C -0.164 4.164 26 C -0.143 4.143 27 H 0.228 0.772 28 H 0.097 0.903 29 H -0.180 1.180 30 H -0.187 1.187 31 H 0.146 0.854 32 H 0.149 0.851 33 H 0.148 0.852 34 H 0.082 0.918 35 H 0.082 0.918 36 H 0.102 0.898 37 H 0.102 0.898 38 H 0.116 0.884 39 H 0.115 0.885 40 H 0.234 0.766 41 H 0.091 0.909 42 H 0.088 0.912 43 H 0.077 0.923 44 H 0.089 0.911 45 H 0.062 0.938 46 H 0.063 0.937 47 H 0.227 0.773 48 H 0.089 0.911 49 H 0.080 0.920 50 H 0.100 0.900 51 H 0.091 0.909 52 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 5.928 0.778 -3.427 6.891 hybrid contribution -0.513 0.312 -0.696 0.919 sum 5.415 1.090 -4.123 6.892 Atomic orbital electron populations 1.86602 1.17632 1.80212 1.49749 1.24855 0.84628 1.11113 0.98183 0.94997 0.91700 0.74317 0.80233 1.19025 0.96544 0.93016 0.94893 1.20846 1.01231 0.99826 0.95248 1.20877 0.98015 0.93677 0.96558 1.21299 1.03533 0.96483 1.01124 1.18989 0.94421 0.83498 0.94432 1.86083 1.70948 1.22400 1.43067 1.22822 0.98560 0.93912 0.86255 1.21223 1.03016 0.92249 0.97775 1.21535 1.02954 0.93138 1.00224 1.20555 0.80052 0.87976 0.81401 1.90749 1.37140 1.74764 1.38380 1.46140 1.53869 1.12668 1.25124 1.20963 0.93667 0.81129 1.00220 0.89257 1.21939 0.96742 1.02057 0.96325 1.21467 0.99908 0.98747 0.94350 1.21192 0.95675 1.01066 0.92867 0.90171 1.22229 0.85196 0.98984 0.93465 1.86485 1.33555 1.84964 1.32824 1.21518 0.96352 1.01213 0.96096 1.21811 0.99651 1.00078 0.94856 1.20239 1.02749 0.94093 0.97242 0.77176 0.90327 1.17959 1.18654 0.85394 0.85127 0.85244 0.91755 0.91833 0.89836 0.89801 0.88449 0.88517 0.76629 0.90877 0.91232 0.92297 0.91118 0.93781 0.93658 0.77276 0.91142 0.91996 0.90008 0.90895 0.84944 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.14 12.74 -35.23 -0.45 -1.59 16 2 C -0.08 -0.06 2.81 36.00 0.10 0.04 16 3 Si 0.69 -0.32 29.79 -169.99 -5.06 -5.38 16 4 C -0.03 -0.08 5.42 -104.64 -0.57 -0.65 16 5 C -0.15 -0.17 8.67 -39.56 -0.34 -0.51 16 6 C -0.07 -0.03 10.04 -39.60 -0.40 -0.43 16 7 C -0.21 -0.22 9.04 -39.43 -0.36 -0.57 16 8 C 0.13 0.39 6.69 -39.22 -0.26 0.13 16 9 O -0.31 -0.97 10.14 -19.43 -0.20 -1.16 16 10 C 0.06 -0.02 4.74 37.16 0.18 0.15 16 11 C -0.10 -0.01 4.87 -26.73 -0.13 -0.14 16 12 C -0.14 0.32 5.70 -27.88 -0.16 0.16 16 13 C 0.51 0.40 7.79 -10.99 -0.09 0.32 16 14 O -0.53 -2.86 15.64 5.56 0.09 -2.77 16 15 N -0.72 1.06 4.23 -53.81 -0.23 0.83 16 16 C 0.14 -0.09 2.78 -67.93 -0.19 -0.27 16 17 H 0.09 0.12 7.58 -51.93 -0.39 -0.27 16 18 C -0.13 -0.03 5.60 -26.73 -0.15 -0.18 16 19 C -0.11 0.03 4.94 -26.74 -0.13 -0.10 16 20 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 21 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 22 C 0.08 -0.12 6.43 37.16 0.24 0.12 16 23 O -0.57 -0.11 13.20 -35.23 -0.46 -0.57 16 24 C -0.11 0.35 5.03 -26.73 -0.13 0.21 16 25 C -0.13 0.31 5.61 -26.73 -0.15 0.16 16 26 C -0.12 -0.43 9.55 -39.43 -0.38 -0.80 16 27 H 0.38 -0.77 8.74 45.56 0.40 -0.38 16 28 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 29 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 30 H -0.26 -0.37 7.11 56.52 0.40 0.03 16 31 H 0.13 -0.11 4.87 -52.49 -0.26 -0.37 16 32 H 0.13 -0.27 8.06 -52.49 -0.42 -0.69 16 33 H 0.13 -0.16 6.30 -52.49 -0.33 -0.49 16 34 H 0.06 -0.13 7.65 -51.93 -0.40 -0.52 16 35 H 0.06 -0.10 7.67 -51.93 -0.40 -0.50 16 36 H 0.08 0.16 8.10 -51.93 -0.42 -0.27 16 37 H 0.08 0.13 8.10 -51.93 -0.42 -0.29 16 38 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 39 H 0.10 -0.40 8.14 -51.92 -0.42 -0.82 16 40 H 0.40 -1.55 6.87 -40.82 -0.28 -1.83 16 41 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 42 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 43 H 0.06 -0.03 7.60 -51.93 -0.39 -0.43 16 44 H 0.07 0.10 7.82 -51.93 -0.41 -0.30 16 45 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 46 H 0.05 -0.10 8.14 -51.93 -0.42 -0.53 16 47 H 0.38 -1.45 9.12 45.56 0.42 -1.03 16 48 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.06 -0.25 6.51 -51.93 -0.34 -0.59 16 50 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 51 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 52 H 0.13 0.47 8.06 -52.49 -0.42 0.04 16 LS Contribution 410.53 15.07 6.19 6.19 Total: 0.00 -10.17 410.53 -11.17 -21.34 By element: Atomic # 1 Polarization: -6.50 SS G_CDS: -7.91 Total: -14.41 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: -3.14 Total: -2.47 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -0.23 Total: 0.83 kcal Atomic # 8 Polarization: -5.07 SS G_CDS: -1.02 Total: -6.10 kcal Atomic # 14 Polarization: -0.32 SS G_CDS: -5.06 Total: -5.38 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -10.17 -11.17 -21.34 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.685 kcal (2) G-P(sol) polarization free energy of solvation -10.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.854 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.172 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.342 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds