Wall clock time and date at job start Mon Mar 8 2021 02:34:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47110 * 2 1 4 4 C 1.50694 * 109.47366 * 240.00220 * 2 1 3 5 5 C 1.38270 * 119.94278 * 299.99394 * 4 2 1 6 6 C 1.38136 * 120.06018 * 179.97438 * 5 4 2 7 7 C 1.38739 * 119.94129 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05443 * 180.02562 * 7 6 5 9 9 C 1.42896 * 117.00011 * 180.02562 * 8 7 6 10 10 F 1.39899 * 109.47390 * 59.99697 * 9 8 7 11 11 F 1.39905 * 109.46571 * 299.99682 * 9 8 7 12 12 C 1.50696 * 109.47183 * 180.02562 * 9 8 7 13 13 O 1.21280 * 120.00232 * 359.97438 * 12 9 8 14 14 N 1.34776 * 120.00133 * 179.97438 * 12 9 8 15 15 C 1.46496 * 120.00390 * 179.97438 * 14 12 9 16 16 H 1.09004 * 109.47374 * 34.99626 * 15 14 12 17 17 C 1.53000 * 109.47631 * 154.99604 * 15 14 12 18 18 C 1.52997 * 109.47060 * 59.99933 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 18 17 15 20 20 H 1.09002 * 109.46716 * 60.00091 * 19 18 17 21 21 C 1.53002 * 109.47628 * 180.02562 * 19 18 17 22 22 O 1.42901 * 109.46914 * 295.00256 * 21 19 18 23 23 C 1.53005 * 109.47159 * 300.00546 * 19 18 17 24 24 C 1.52997 * 109.47452 * 59.99536 * 23 19 18 25 25 C 1.38729 * 119.88861 * 0.27354 * 7 6 5 26 26 C 1.38148 * 119.94183 * 359.42816 * 25 7 6 27 27 H 0.96698 * 114.00251 * 59.99805 * 1 2 3 28 28 H 1.09007 * 109.47127 * 119.99418 * 2 1 3 29 29 H 1.48507 * 110.00200 * 59.99778 * 3 2 1 30 30 H 1.48502 * 110.00198 * 181.31929 * 3 2 1 31 31 H 1.08010 * 119.96983 * 359.97438 * 5 4 2 32 32 H 1.07994 * 120.03282 * 180.02562 * 6 5 4 33 33 H 0.97001 * 120.00215 * 359.97438 * 14 12 9 34 34 H 1.09002 * 109.47398 * 180.02562 * 17 15 14 35 35 H 1.09001 * 109.47194 * 300.00282 * 17 15 14 36 36 H 1.08996 * 109.47853 * 180.02562 * 18 17 15 37 37 H 1.09002 * 109.47153 * 300.00319 * 18 17 15 38 38 H 1.09000 * 109.46791 * 55.00346 * 21 19 18 39 39 H 1.08998 * 109.47254 * 175.00241 * 21 19 18 40 40 H 0.96697 * 113.99597 * 179.97438 * 22 21 19 41 41 H 1.09002 * 109.46935 * 299.99411 * 23 19 18 42 42 H 1.09001 * 109.46812 * 179.97438 * 23 19 18 43 43 H 1.08993 * 109.47194 * 179.97438 * 24 23 19 44 44 H 1.09002 * 109.46695 * 59.99734 * 24 23 19 45 45 H 1.08000 * 120.02919 * 179.71649 * 25 7 6 46 46 H 1.07996 * 119.97181 * 180.27513 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.5967 -2.0341 -1.4481 6 6 2.0555 -2.6875 -2.5754 7 6 2.8531 -2.0143 -3.4894 8 8 3.3052 -2.6547 -4.5996 9 6 4.1221 -1.8997 -5.4966 10 9 5.2671 -1.4578 -4.8249 11 9 3.4019 -0.7961 -5.9663 12 6 4.5255 -2.7679 -6.6603 13 8 4.1507 -3.9200 -6.7159 14 7 5.3027 -2.2642 -7.6395 15 6 5.6952 -3.1084 -8.7705 16 1 4.8810 -3.7907 -9.0145 17 6 6.0023 -2.2267 -9.9827 18 6 7.1452 -1.2690 -9.6403 19 6 8.3912 -2.0746 -9.2670 20 1 8.6833 -2.7027 -10.1086 21 6 9.5340 -1.1169 -8.9240 22 8 9.8990 -0.3742 -10.0890 23 6 8.0842 -2.9564 -8.0549 24 6 6.9412 -3.9141 -8.3972 25 6 3.1926 -0.6879 -3.2657 26 6 2.7261 -0.0373 -2.1398 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8901 29 1 1.5614 2.4680 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 0.9761 -2.5579 -0.7359 32 1 1.7935 -3.7213 -2.7451 33 1 5.6021 -1.3426 -7.5953 34 1 6.2939 -2.8549 -10.8244 35 1 5.1146 -1.6527 -10.2486 36 1 7.3637 -0.6405 -10.5036 37 1 6.8531 -0.6408 -8.7987 38 1 9.2102 -0.4301 -8.1419 39 1 10.3936 -1.6878 -8.5730 40 1 10.6193 0.2546 -9.9448 41 1 7.7921 -2.3282 -7.2133 42 1 8.9717 -3.5306 -7.7892 43 1 6.7228 -4.5425 -7.5339 44 1 7.2333 -4.5422 -9.2388 45 1 3.8171 -0.1631 -3.9734 46 1 2.9864 0.9966 -1.9674 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:36 Heat of formation + Delta-G solvation = -226.482491 kcal Electronic energy + Delta-G solvation = -33095.277482 eV Core-core repulsion = 28201.454079 eV Total energy + Delta-G solvation = -4893.823403 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -50.80758 -48.78460 -41.64597 -41.26761 -39.82916 -39.13829 -37.64277 -37.22779 -35.15114 -32.44960 -32.16820 -32.00908 -31.78874 -28.86574 -26.67004 -26.12133 -24.51844 -23.88677 -23.02806 -22.46231 -22.25431 -20.70614 -20.36761 -19.86622 -19.59706 -18.55687 -18.34339 -17.59982 -17.24420 -16.93157 -16.82908 -16.59008 -16.27576 -16.12277 -15.84752 -15.81455 -15.60090 -15.40527 -15.27071 -15.22303 -15.03194 -14.97404 -14.87334 -14.35308 -14.28879 -14.15671 -14.14757 -13.58668 -13.52585 -13.36468 -13.29940 -12.97175 -12.74388 -12.35700 -12.34861 -12.11847 -11.82948 -11.70791 -11.53940 -11.44014 -11.30873 -10.99601 -10.49346 -10.47377 -10.15692 -9.51448 -5.08059 0.07718 0.18848 0.54480 0.76427 1.24955 1.58472 1.78507 1.93233 2.06592 2.50257 2.78442 3.07468 3.31326 3.40938 3.44522 3.51395 3.54554 3.66123 3.67720 3.74956 3.88950 4.03100 4.10652 4.16163 4.21813 4.22388 4.28273 4.29409 4.41079 4.46285 4.50187 4.50892 4.55502 4.77542 4.81107 4.82553 4.91416 4.94552 4.95269 4.98736 5.08244 5.11294 5.23060 5.27306 5.37223 5.41881 5.82401 5.89872 6.45894 6.53589 6.57824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.065 4.065 3 Si 0.686 3.314 4 C -0.143 4.143 5 C -0.056 4.056 6 C -0.126 4.126 7 C 0.107 3.893 8 O -0.286 6.286 9 C 0.431 3.569 10 F -0.176 7.176 11 F -0.175 7.175 12 C 0.516 3.484 13 O -0.468 6.468 14 N -0.697 5.697 15 C 0.145 3.855 16 H 0.099 0.901 17 C -0.129 4.129 18 C -0.114 4.114 19 C -0.089 4.089 20 H 0.082 0.918 21 C 0.078 3.922 22 O -0.573 6.573 23 C -0.115 4.115 24 C -0.132 4.132 25 C -0.187 4.187 26 C -0.078 4.078 27 H 0.380 0.620 28 H 0.115 0.885 29 H -0.253 1.253 30 H -0.257 1.257 31 H 0.140 0.860 32 H 0.141 0.859 33 H 0.408 0.592 34 H 0.088 0.912 35 H 0.075 0.925 36 H 0.080 0.920 37 H 0.057 0.943 38 H 0.045 0.955 39 H 0.046 0.954 40 H 0.381 0.619 41 H 0.063 0.937 42 H 0.069 0.931 43 H 0.073 0.927 44 H 0.082 0.918 45 H 0.136 0.864 46 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.449 3.340 -2.905 5.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.176 4.176 3 Si 0.588 3.412 4 C -0.143 4.143 5 C -0.074 4.074 6 C -0.145 4.145 7 C 0.064 3.936 8 O -0.202 6.202 9 C 0.353 3.647 10 F -0.157 7.157 11 F -0.156 7.156 12 C 0.293 3.707 13 O -0.339 6.339 14 N -0.351 5.351 15 C 0.042 3.958 16 H 0.117 0.883 17 C -0.167 4.167 18 C -0.151 4.151 19 C -0.107 4.107 20 H 0.101 0.899 21 C 0.000 4.000 22 O -0.379 6.379 23 C -0.153 4.153 24 C -0.170 4.170 25 C -0.205 4.205 26 C -0.095 4.095 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.178 1.178 30 H -0.182 1.182 31 H 0.158 0.842 32 H 0.159 0.841 33 H 0.245 0.755 34 H 0.106 0.894 35 H 0.094 0.906 36 H 0.098 0.902 37 H 0.075 0.925 38 H 0.063 0.937 39 H 0.065 0.935 40 H 0.228 0.772 41 H 0.082 0.918 42 H 0.088 0.912 43 H 0.092 0.908 44 H 0.101 0.899 45 H 0.153 0.847 46 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.243 2.247 -2.292 3.916 hybrid contribution 0.906 0.578 0.578 1.220 sum 3.149 2.826 -1.714 4.565 Atomic orbital electron populations 1.86505 1.16994 1.81684 1.49310 1.25005 0.85307 1.09995 0.97257 0.94756 0.80995 0.78105 0.87334 1.20371 1.00663 0.95506 0.97773 1.20891 0.97145 0.93468 0.95878 1.20541 0.99152 1.01251 0.93531 1.18989 0.96391 0.91764 0.86472 1.86675 1.63445 1.38402 1.31696 1.21895 0.76712 0.79491 0.86628 1.93186 1.50929 1.89947 1.81665 1.93193 1.78237 1.55620 1.88570 1.19311 0.80953 0.87654 0.82758 1.90871 1.52212 1.15679 1.75131 1.46003 1.50201 1.16719 1.22217 1.21243 0.97844 0.92395 0.84316 0.88317 1.21885 0.99423 0.98586 0.96782 1.21557 0.93846 0.97623 1.02108 1.21194 0.94264 0.96308 0.98979 0.89927 1.22228 0.96760 0.93656 0.87328 1.86463 1.58106 1.57622 1.35698 1.21520 0.98712 0.97746 0.97298 1.21936 0.94083 0.97911 1.03067 1.21468 1.04561 0.93642 1.00850 1.20801 0.96355 0.99327 0.93056 0.77284 0.86718 1.17791 1.18238 0.84224 0.84135 0.75540 0.89361 0.90598 0.90181 0.92475 0.93686 0.93540 0.77183 0.91794 0.91184 0.90787 0.89919 0.84655 0.84890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.02 12.77 -35.23 -0.45 -0.47 16 2 C -0.06 0.02 2.82 36.00 0.10 0.12 16 3 Si 0.69 -0.77 29.78 -169.99 -5.06 -5.83 16 4 C -0.14 -0.05 5.39 -104.60 -0.56 -0.61 16 5 C -0.06 -0.04 9.60 -39.61 -0.38 -0.42 16 6 C -0.13 -0.20 9.99 -39.43 -0.39 -0.60 16 7 C 0.11 0.29 6.48 -39.21 -0.25 0.03 16 8 O -0.29 -1.04 9.60 -39.34 -0.38 -1.41 16 9 C 0.43 0.75 2.05 36.00 0.07 0.82 16 10 F -0.18 -0.19 15.28 2.25 0.03 -0.16 16 11 F -0.17 -0.17 15.31 2.25 0.03 -0.14 16 12 C 0.52 0.88 7.31 -10.99 -0.08 0.80 16 13 O -0.47 -2.29 16.16 -14.35 -0.23 -2.52 16 14 N -0.70 0.87 4.23 -53.81 -0.23 0.65 16 15 C 0.14 -0.25 2.78 -67.93 -0.19 -0.44 16 16 H 0.10 -0.07 7.58 -51.93 -0.39 -0.46 16 17 C -0.13 0.38 5.61 -26.73 -0.15 0.23 16 18 C -0.11 0.28 4.93 -26.73 -0.13 0.15 16 19 C -0.09 0.18 2.43 -90.62 -0.22 -0.04 16 20 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 21 C 0.08 -0.15 6.43 37.16 0.24 0.09 16 22 O -0.57 0.37 13.20 -35.23 -0.46 -0.09 16 23 C -0.12 0.25 5.04 -26.73 -0.13 0.12 16 24 C -0.13 0.22 5.60 -26.73 -0.15 0.07 16 25 C -0.19 -0.28 8.26 -39.43 -0.33 -0.60 16 26 C -0.08 -0.02 8.66 -39.61 -0.34 -0.36 16 27 H 0.38 -1.41 8.70 45.56 0.40 -1.02 16 28 H 0.12 -0.01 7.96 -51.92 -0.41 -0.42 16 29 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 30 H -0.26 -0.30 7.11 56.52 0.40 0.11 16 31 H 0.14 -0.06 8.06 -52.48 -0.42 -0.48 16 32 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 33 H 0.41 -1.24 6.87 -40.82 -0.28 -1.52 16 34 H 0.09 -0.28 8.14 -51.93 -0.42 -0.71 16 35 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 36 H 0.08 -0.10 7.82 -51.93 -0.41 -0.51 16 37 H 0.06 -0.18 6.51 -51.93 -0.34 -0.52 16 38 H 0.04 -0.12 8.14 -51.93 -0.42 -0.54 16 39 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.38 -1.69 9.12 45.56 0.42 -1.27 16 41 H 0.06 -0.13 7.60 -51.93 -0.39 -0.52 16 42 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 43 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 44 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 45 H 0.14 0.09 5.10 -52.49 -0.27 -0.18 16 46 H 0.13 -0.24 4.87 -52.49 -0.26 -0.50 16 LS Contribution 377.30 15.07 5.69 5.69 Total: 0.00 -7.93 377.30 -9.33 -17.26 By element: Atomic # 1 Polarization: -6.99 SS G_CDS: -5.36 Total: -12.35 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -2.90 Total: -0.63 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.23 Total: 0.65 kcal Atomic # 8 Polarization: -2.96 SS G_CDS: -1.52 Total: -4.49 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.07 Total: -0.30 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.06 Total: -5.83 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -7.93 -9.33 -17.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.223 kcal (2) G-P(sol) polarization free energy of solvation -7.934 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -217.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.326 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.259 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.482 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds