Wall clock time and date at job start Mon Mar 8 2021 02:34:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47110 * 2 1 4 4 C 1.50694 * 109.47366 * 240.00220 * 2 1 3 5 5 C 1.38270 * 119.94278 * 299.99394 * 4 2 1 6 6 C 1.38136 * 120.06018 * 179.97438 * 5 4 2 7 7 C 1.38739 * 119.94129 * 0.02562 * 6 5 4 8 8 O 1.35902 * 120.05443 * 180.02562 * 7 6 5 9 9 C 1.42896 * 117.00011 * 180.02562 * 8 7 6 10 10 F 1.39899 * 109.47390 * 59.99697 * 9 8 7 11 11 F 1.39905 * 109.46571 * 299.99682 * 9 8 7 12 12 C 1.50696 * 109.47183 * 180.02562 * 9 8 7 13 13 O 1.21280 * 120.00232 * 359.97438 * 12 9 8 14 14 N 1.34776 * 120.00133 * 179.97438 * 12 9 8 15 15 C 1.46496 * 120.00390 * 179.97438 * 14 12 9 16 16 H 1.09004 * 109.47374 * 34.99626 * 15 14 12 17 17 C 1.53000 * 109.47631 * 154.99604 * 15 14 12 18 18 C 1.52997 * 109.47060 * 59.99933 * 17 15 14 19 19 C 1.52999 * 109.47317 * 59.99960 * 18 17 15 20 20 H 1.09002 * 109.46716 * 60.00091 * 19 18 17 21 21 C 1.53002 * 109.47628 * 180.02562 * 19 18 17 22 22 O 1.42901 * 109.46914 * 295.00256 * 21 19 18 23 23 C 1.53005 * 109.47159 * 300.00546 * 19 18 17 24 24 C 1.52997 * 109.47452 * 59.99536 * 23 19 18 25 25 C 1.38729 * 119.88861 * 0.27354 * 7 6 5 26 26 C 1.38148 * 119.94183 * 359.42816 * 25 7 6 27 27 H 0.96698 * 114.00251 * 59.99805 * 1 2 3 28 28 H 1.09007 * 109.47127 * 119.99418 * 2 1 3 29 29 H 1.48507 * 110.00200 * 59.99778 * 3 2 1 30 30 H 1.48502 * 110.00198 * 181.31929 * 3 2 1 31 31 H 1.08010 * 119.96983 * 359.97438 * 5 4 2 32 32 H 1.07994 * 120.03282 * 180.02562 * 6 5 4 33 33 H 0.97001 * 120.00215 * 359.97438 * 14 12 9 34 34 H 1.09002 * 109.47398 * 180.02562 * 17 15 14 35 35 H 1.09001 * 109.47194 * 300.00282 * 17 15 14 36 36 H 1.08996 * 109.47853 * 180.02562 * 18 17 15 37 37 H 1.09002 * 109.47153 * 300.00319 * 18 17 15 38 38 H 1.09000 * 109.46791 * 55.00346 * 21 19 18 39 39 H 1.08998 * 109.47254 * 175.00241 * 21 19 18 40 40 H 0.96697 * 113.99597 * 179.97438 * 22 21 19 41 41 H 1.09002 * 109.46935 * 299.99411 * 23 19 18 42 42 H 1.09001 * 109.46812 * 179.97438 * 23 19 18 43 43 H 1.08993 * 109.47194 * 179.97438 * 24 23 19 44 44 H 1.09002 * 109.46695 * 59.99734 * 24 23 19 45 45 H 1.08000 * 120.02919 * 179.71649 * 25 7 6 46 46 H 1.07996 * 119.97181 * 180.27513 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 1.5967 -2.0341 -1.4481 6 6 2.0555 -2.6875 -2.5754 7 6 2.8531 -2.0143 -3.4894 8 8 3.3052 -2.6547 -4.5996 9 6 4.1221 -1.8997 -5.4966 10 9 5.2671 -1.4578 -4.8249 11 9 3.4019 -0.7961 -5.9663 12 6 4.5255 -2.7679 -6.6603 13 8 4.1507 -3.9200 -6.7159 14 7 5.3027 -2.2642 -7.6395 15 6 5.6952 -3.1084 -8.7705 16 1 4.8810 -3.7907 -9.0145 17 6 6.0023 -2.2267 -9.9827 18 6 7.1452 -1.2690 -9.6403 19 6 8.3912 -2.0746 -9.2670 20 1 8.6833 -2.7027 -10.1086 21 6 9.5340 -1.1169 -8.9240 22 8 9.8990 -0.3742 -10.0890 23 6 8.0842 -2.9564 -8.0549 24 6 6.9412 -3.9141 -8.3972 25 6 3.1926 -0.6879 -3.2657 26 6 2.7261 -0.0373 -2.1398 27 1 -0.3933 0.4417 -0.7650 28 1 1.7923 -0.5138 0.8901 29 1 1.5614 2.4680 1.2085 30 1 3.5346 1.7703 -0.0321 31 1 0.9761 -2.5579 -0.7359 32 1 1.7935 -3.7213 -2.7451 33 1 5.6021 -1.3426 -7.5953 34 1 6.2939 -2.8549 -10.8244 35 1 5.1146 -1.6527 -10.2486 36 1 7.3637 -0.6405 -10.5036 37 1 6.8531 -0.6408 -8.7987 38 1 9.2102 -0.4301 -8.1419 39 1 10.3936 -1.6878 -8.5730 40 1 10.6193 0.2546 -9.9448 41 1 7.7921 -2.3282 -7.2133 42 1 8.9717 -3.5306 -7.7892 43 1 6.7228 -4.5425 -7.5339 44 1 7.2333 -4.5422 -9.2388 45 1 3.8171 -0.1631 -3.9734 46 1 2.9864 0.9966 -1.9674 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:35 Heat of formation + Delta-G solvation = -226.019655 kcal Electronic energy + Delta-G solvation = -33095.257412 eV Core-core repulsion = 28201.454079 eV Total energy + Delta-G solvation = -4893.803333 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.147 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -50.91552 -48.88542 -41.69175 -41.33794 -39.82474 -39.20054 -37.55068 -37.23483 -35.14841 -32.49629 -32.15625 -31.90448 -31.73750 -28.93179 -26.59898 -26.09744 -24.56925 -23.73773 -23.05146 -22.51273 -22.16907 -20.74678 -20.34716 -19.91830 -19.71443 -18.57076 -18.21103 -17.66701 -17.31529 -16.88359 -16.80908 -16.62385 -16.29169 -16.09629 -15.87177 -15.79052 -15.59270 -15.44567 -15.37807 -15.19617 -15.13237 -14.93091 -14.84192 -14.42284 -14.37146 -14.23913 -14.02991 -13.61121 -13.38558 -13.24727 -13.16408 -13.04183 -12.61936 -12.40498 -12.18248 -12.15320 -11.89151 -11.62684 -11.51086 -11.40589 -11.17677 -10.84049 -10.47657 -10.45949 -10.21073 -9.59661 -5.01350 -0.00017 0.13710 0.46094 0.63440 1.29760 1.61598 1.66458 1.95008 1.98543 2.44374 2.76197 3.20541 3.28096 3.47746 3.52991 3.58414 3.63883 3.67311 3.73468 3.83583 4.02171 4.07485 4.18647 4.20271 4.33159 4.37018 4.38758 4.42501 4.46064 4.50280 4.59743 4.65651 4.72224 4.80859 4.88365 4.89447 4.96936 5.02529 5.05234 5.11881 5.12557 5.24023 5.32761 5.36672 5.38691 5.43629 5.80099 5.85022 6.44022 6.76486 6.88783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.069 4.069 3 Si 0.771 3.229 4 C -0.141 4.141 5 C -0.058 4.058 6 C -0.136 4.136 7 C 0.085 3.915 8 O -0.305 6.305 9 C 0.433 3.567 10 F -0.172 7.172 11 F -0.170 7.170 12 C 0.516 3.484 13 O -0.507 6.507 14 N -0.679 5.679 15 C 0.144 3.856 16 H 0.089 0.911 17 C -0.121 4.121 18 C -0.111 4.111 19 C -0.087 4.087 20 H 0.074 0.926 21 C 0.075 3.925 22 O -0.593 6.593 23 C -0.110 4.110 24 C -0.130 4.130 25 C -0.193 4.193 26 C -0.078 4.078 27 H 0.396 0.604 28 H 0.112 0.888 29 H -0.298 1.298 30 H -0.284 1.284 31 H 0.150 0.850 32 H 0.144 0.856 33 H 0.418 0.582 34 H 0.094 0.906 35 H 0.081 0.919 36 H 0.071 0.929 37 H 0.065 0.935 38 H 0.053 0.947 39 H 0.049 0.951 40 H 0.395 0.605 41 H 0.064 0.936 42 H 0.071 0.929 43 H 0.056 0.944 44 H 0.091 0.909 45 H 0.142 0.858 46 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.647 4.401 -3.117 6.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.179 4.179 3 Si 0.678 3.322 4 C -0.142 4.142 5 C -0.076 4.076 6 C -0.155 4.155 7 C 0.043 3.957 8 O -0.222 6.222 9 C 0.356 3.644 10 F -0.154 7.154 11 F -0.151 7.151 12 C 0.294 3.706 13 O -0.380 6.380 14 N -0.333 5.333 15 C 0.042 3.958 16 H 0.107 0.893 17 C -0.159 4.159 18 C -0.148 4.148 19 C -0.105 4.105 20 H 0.093 0.907 21 C -0.002 4.002 22 O -0.401 6.401 23 C -0.147 4.147 24 C -0.168 4.168 25 C -0.212 4.212 26 C -0.095 4.095 27 H 0.246 0.754 28 H 0.129 0.871 29 H -0.225 1.225 30 H -0.211 1.211 31 H 0.167 0.833 32 H 0.162 0.838 33 H 0.257 0.743 34 H 0.112 0.888 35 H 0.100 0.900 36 H 0.089 0.911 37 H 0.084 0.916 38 H 0.071 0.929 39 H 0.067 0.933 40 H 0.245 0.755 41 H 0.082 0.918 42 H 0.089 0.911 43 H 0.075 0.925 44 H 0.109 0.891 45 H 0.159 0.841 46 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 2.453 3.334 -2.540 4.856 hybrid contribution 0.860 0.279 0.677 1.130 sum 3.313 3.613 -1.863 5.244 Atomic orbital electron populations 1.86472 1.17035 1.82139 1.50539 1.25123 0.85391 1.10619 0.96756 0.93764 0.77933 0.75505 0.85033 1.20497 1.00355 0.95408 0.97918 1.21048 0.97090 0.93792 0.95684 1.20703 0.99303 1.01641 0.93808 1.19248 0.97318 0.92502 0.86666 1.86649 1.63919 1.39353 1.32276 1.21820 0.76683 0.79522 0.86421 1.93188 1.50676 1.89881 1.81618 1.93196 1.78168 1.55305 1.88476 1.19393 0.80946 0.87179 0.83043 1.90851 1.53965 1.17178 1.76027 1.45987 1.48763 1.17205 1.21393 1.21307 0.97500 0.92532 0.84488 0.89308 1.21842 0.99548 0.98378 0.96129 1.21525 0.93710 0.97549 1.02062 1.21159 0.94553 0.96244 0.98581 0.90736 1.22284 0.96886 0.93820 0.87221 1.86421 1.58993 1.58243 1.36485 1.21467 0.98457 0.97566 0.97256 1.21906 0.94265 0.97946 1.02670 1.21609 1.04778 0.93321 1.01460 1.21026 0.95791 1.00231 0.92436 0.75406 0.87084 1.22549 1.21095 0.83278 0.83797 0.74292 0.88768 0.89990 0.91053 0.91610 0.92853 0.93263 0.75537 0.91770 0.91052 0.92536 0.89081 0.84061 0.82862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.39 12.77 -148.98 -1.90 -1.51 16 2 C -0.07 0.09 2.82 71.23 0.20 0.29 16 3 Si 0.77 -2.20 29.78 68.60 2.04 -0.15 16 4 C -0.14 -0.03 5.39 -19.85 -0.11 -0.13 16 5 C -0.06 -0.09 9.60 22.25 0.21 0.13 16 6 C -0.14 -0.55 9.99 22.37 0.22 -0.32 16 7 C 0.09 0.52 6.48 22.51 0.15 0.67 16 8 O -0.30 -2.60 9.60 -73.41 -0.70 -3.30 16 9 C 0.43 1.80 2.05 71.23 0.15 1.94 16 10 F -0.17 -0.42 15.28 44.97 0.69 0.26 16 11 F -0.17 -0.36 15.31 44.97 0.69 0.33 16 12 C 0.52 2.25 7.31 87.66 0.64 2.89 16 13 O -0.51 -5.80 16.16 16.01 0.26 -5.54 16 14 N -0.68 1.55 4.23 -442.54 -1.87 -0.33 16 15 C 0.14 -0.45 2.78 44.99 0.13 -0.32 16 16 H 0.09 -0.04 7.58 -2.39 -0.02 -0.06 16 17 C -0.12 0.76 5.61 30.59 0.17 0.93 16 18 C -0.11 0.61 4.93 30.59 0.15 0.76 16 19 C -0.09 0.38 2.43 -10.79 -0.03 0.35 16 20 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 21 C 0.08 -0.32 6.43 71.98 0.46 0.15 16 22 O -0.59 0.98 13.20 -148.98 -1.97 -0.99 16 23 C -0.11 0.49 5.04 30.60 0.15 0.65 16 24 C -0.13 0.37 5.60 30.59 0.17 0.54 16 25 C -0.19 -0.57 8.26 22.37 0.18 -0.38 16 26 C -0.08 0.02 8.66 22.25 0.19 0.21 16 27 H 0.40 -3.38 8.70 -74.06 -0.64 -4.02 16 28 H 0.11 -0.06 7.96 -2.38 -0.02 -0.08 16 29 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 30 H -0.28 -0.47 7.11 99.48 0.71 0.23 16 31 H 0.15 -0.14 8.06 -2.91 -0.02 -0.17 16 32 H 0.14 0.34 8.06 -2.91 -0.02 0.31 16 33 H 0.42 -2.73 6.87 -92.71 -0.64 -3.37 16 34 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 35 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 36 H 0.07 -0.21 7.82 -2.39 -0.02 -0.23 16 37 H 0.07 -0.48 6.51 -2.39 -0.02 -0.49 16 38 H 0.05 -0.32 8.14 -2.39 -0.02 -0.34 16 39 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 40 H 0.40 -3.63 9.12 -74.06 -0.68 -4.31 16 41 H 0.06 -0.28 7.60 -2.39 -0.02 -0.30 16 42 H 0.07 -0.32 8.14 -2.39 -0.02 -0.33 16 43 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 44 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 45 H 0.14 0.15 5.10 -2.91 -0.01 0.13 16 46 H 0.15 -0.77 4.87 -2.91 -0.01 -0.78 16 Total: 0.00 -18.90 377.30 -0.58 -19.48 By element: Atomic # 1 Polarization: -15.73 SS G_CDS: -0.86 Total: -16.60 kcal Atomic # 6 Polarization: 5.30 SS G_CDS: 3.05 Total: 8.35 kcal Atomic # 7 Polarization: 1.55 SS G_CDS: -1.87 Total: -0.33 kcal Atomic # 8 Polarization: -7.03 SS G_CDS: -4.31 Total: -11.34 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 1.38 Total: 0.59 kcal Atomic # 14 Polarization: -2.20 SS G_CDS: 2.04 Total: -0.15 kcal Total: -18.90 -0.58 -19.48 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -206.541 kcal (2) G-P(sol) polarization free energy of solvation -18.898 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds