Wall clock time and date at job start Mon Mar 8 2021 02:34:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35982 * 117.00117 * 2 1 4 4 C 1.38676 * 119.99975 * 180.02562 * 3 2 1 5 5 C 1.38151 * 119.99847 * 180.02562 * 4 3 2 6 6 C 1.50702 * 120.00066 * 180.02562 * 5 4 3 7 7 O 1.42901 * 109.46920 * 104.97809 * 6 5 4 8 8 Si 1.86298 * 109.47135 * 344.98399 * 6 5 4 9 9 C 1.38681 * 120.00136 * 0.02562 * 5 4 3 10 10 O 1.35982 * 119.99862 * 180.02562 * 9 5 4 11 11 C 1.42901 * 116.99779 * 179.97438 * 10 9 5 12 12 C 1.50699 * 109.47143 * 180.02562 * 11 10 9 13 13 O 1.21287 * 119.99956 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00179 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00075 * 179.97438 * 14 12 11 16 16 H 1.09002 * 109.47092 * 324.99806 * 15 14 12 17 17 C 1.52997 * 109.47007 * 84.99755 * 15 14 12 18 18 C 1.53006 * 109.47127 * 60.00219 * 17 15 14 19 19 C 1.52997 * 109.47164 * 59.99836 * 18 17 15 20 20 H 1.09001 * 109.47375 * 59.99966 * 19 18 17 21 21 C 1.52996 * 109.46975 * 180.02562 * 19 18 17 22 22 O 1.42903 * 109.47203 * 294.99757 * 21 19 18 23 23 C 1.53002 * 109.46978 * 299.99874 * 19 18 17 24 24 C 1.52996 * 109.46891 * 60.00410 * 23 19 18 25 25 C 1.38714 * 119.99662 * 0.27321 * 9 5 4 26 26 C 1.38111 * 120.00133 * 359.45088 * 25 9 5 27 27 H 1.09006 * 109.46716 * 299.99310 * 1 2 3 28 28 H 1.09007 * 109.47254 * 59.99253 * 1 2 3 29 29 H 1.09003 * 109.47435 * 179.97438 * 1 2 3 30 30 H 1.08001 * 120.00076 * 0.04493 * 4 3 2 31 31 H 1.08996 * 109.47552 * 224.97879 * 6 5 4 32 32 H 0.96707 * 113.99806 * 60.00197 * 7 6 5 33 33 H 1.48508 * 109.99750 * 299.99412 * 8 6 5 34 34 H 1.48494 * 110.00241 * 61.31455 * 8 6 5 35 35 H 1.08999 * 109.46801 * 60.00349 * 11 10 9 36 36 H 1.08999 * 109.47123 * 300.00214 * 11 10 9 37 37 H 0.96997 * 119.99651 * 359.97438 * 14 12 11 38 38 H 1.08998 * 109.47533 * 179.97438 * 17 15 14 39 39 H 1.08996 * 109.47853 * 300.00060 * 17 15 14 40 40 H 1.09001 * 109.47002 * 299.99574 * 18 17 15 41 41 H 1.09000 * 109.47050 * 179.97438 * 18 17 15 42 42 H 1.08998 * 109.47611 * 54.99598 * 21 19 18 43 43 H 1.09001 * 109.47165 * 175.00100 * 21 19 18 44 44 H 0.96696 * 114.00572 * 180.02562 * 22 21 19 45 45 H 1.08992 * 109.47056 * 300.00064 * 23 19 18 46 46 H 1.09004 * 109.47006 * 180.02562 * 23 19 18 47 47 H 1.09004 * 109.47368 * 179.97438 * 24 23 19 48 48 H 1.09001 * 109.47372 * 59.99964 * 24 23 19 49 49 H 1.08011 * 119.99691 * 179.70299 * 25 9 5 50 50 H 1.07997 * 119.99673 * 180.25466 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0584 2.5151 0.0000 6 6 5.5634 2.5940 -0.0012 7 8 6.0197 2.9677 -1.3028 8 14 6.2727 0.9319 0.4519 9 6 3.3031 3.6782 0.0016 10 8 3.9205 4.8897 0.0016 11 6 3.0806 6.0458 0.0027 12 6 3.9348 7.2874 0.0019 13 8 5.1439 7.1916 0.0010 14 7 3.3552 8.5041 0.0033 15 6 4.1856 9.7111 0.0031 16 1 5.0858 9.5329 0.5914 17 6 4.5767 10.0607 -1.4341 18 6 3.3132 10.3109 -2.2600 19 6 2.5260 11.4717 -1.6489 20 1 3.1438 12.3697 -1.6490 21 6 1.2622 11.7214 -2.4744 22 8 1.6279 12.1607 -3.7841 23 6 2.1349 11.1220 -0.2116 24 6 3.3983 10.8719 0.6142 25 6 1.9179 3.6055 0.0084 26 6 1.2909 2.3750 0.0021 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5140 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 4.0194 0.3784 -0.0017 31 1 5.8888 3.3383 0.7255 32 1 5.6888 3.8249 -1.6044 33 1 5.8056 0.5318 1.8036 34 1 5.8625 -0.0854 -0.5490 35 1 2.4521 6.0374 0.8933 36 1 2.4506 6.0381 -0.8867 37 1 2.3883 8.5807 0.0044 38 1 5.1942 10.9589 -1.4344 39 1 5.1376 9.2338 -1.8696 40 1 2.6954 9.4129 -2.2599 41 1 3.5919 10.5604 -3.2838 42 1 0.6880 10.7979 -2.5481 43 1 0.6573 12.4878 -1.9898 44 1 0.8747 12.3389 -4.3638 45 1 1.5171 10.2241 -0.2115 46 1 1.5736 11.9488 0.2236 47 1 3.1198 10.6232 1.6382 48 1 4.0162 11.7699 0.6140 49 1 1.3297 4.5114 0.0145 50 1 0.2124 2.3185 0.0033 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:47 Heat of formation + Delta-G solvation = -168.105105 kcal Electronic energy + Delta-G solvation = -31925.717599 eV Core-core repulsion = 27499.113770 eV Total energy + Delta-G solvation = -4426.603829 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -41.90051 -41.32539 -40.21508 -39.37072 -38.03657 -37.49781 -36.83166 -34.88764 -32.83757 -32.13899 -31.91710 -30.92390 -29.27678 -28.11775 -26.49331 -26.43580 -23.98455 -23.79329 -22.44347 -22.34704 -21.99482 -20.31326 -19.54228 -18.84610 -18.68773 -18.29769 -17.95041 -17.56752 -17.45593 -16.90437 -16.75090 -16.51262 -16.05129 -16.00042 -15.80688 -15.56651 -15.33781 -15.25000 -14.95114 -14.81417 -14.56884 -14.12685 -14.02569 -13.87356 -13.70347 -13.51213 -13.39938 -13.32287 -13.14785 -13.07445 -12.69258 -12.58226 -12.30356 -12.29077 -11.98212 -11.69860 -11.55954 -11.45127 -11.23870 -11.11227 -10.96096 -10.91401 -10.84803 -10.16008 -10.12603 -8.85662 -4.67888 0.02745 0.31244 1.38875 1.46748 1.52598 1.80289 2.10399 2.22243 2.50097 2.52772 3.07030 3.37375 3.50467 3.53076 3.57818 3.61789 3.73216 3.76821 3.82607 3.89902 3.92643 4.03568 4.08946 4.10751 4.11564 4.13403 4.23591 4.28679 4.30468 4.31834 4.38132 4.45106 4.47500 4.50556 4.53986 4.60682 4.61180 4.84330 4.90394 4.96290 4.98726 5.00967 5.07631 5.13938 5.16843 5.29513 5.31425 5.35489 5.42210 6.05130 6.29652 6.35811 6.58466 6.76545 7.07137 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.316 6.316 3 C 0.103 3.897 4 C -0.115 4.115 5 C -0.096 4.096 6 C -0.076 4.076 7 O -0.533 6.533 8 Si 0.747 3.253 9 C 0.103 3.897 10 O -0.287 6.287 11 C 0.040 3.960 12 C 0.516 3.484 13 O -0.510 6.510 14 N -0.720 5.720 15 C 0.148 3.852 16 H 0.092 0.908 17 C -0.133 4.133 18 C -0.108 4.108 19 C -0.090 4.090 20 H 0.081 0.919 21 C 0.079 3.921 22 O -0.572 6.572 23 C -0.115 4.115 24 C -0.126 4.126 25 C -0.164 4.164 26 C -0.164 4.164 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.103 0.897 30 H 0.139 0.861 31 H 0.080 0.920 32 H 0.368 0.632 33 H -0.249 1.249 34 H -0.251 1.251 35 H 0.092 0.908 36 H 0.093 0.907 37 H 0.399 0.601 38 H 0.075 0.925 39 H 0.070 0.930 40 H 0.058 0.942 41 H 0.072 0.928 42 H 0.043 0.957 43 H 0.045 0.955 44 H 0.381 0.619 45 H 0.061 0.939 46 H 0.071 0.929 47 H 0.073 0.927 48 H 0.084 0.916 49 H 0.135 0.865 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.984 3.708 1.533 8.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.230 6.230 3 C 0.058 3.942 4 C -0.133 4.133 5 C -0.097 4.097 6 C -0.184 4.184 7 O -0.339 6.339 8 Si 0.646 3.354 9 C 0.057 3.943 10 O -0.200 6.200 11 C -0.039 4.039 12 C 0.300 3.700 13 O -0.383 6.383 14 N -0.375 5.375 15 C 0.044 3.956 16 H 0.110 0.890 17 C -0.171 4.171 18 C -0.145 4.145 19 C -0.108 4.108 20 H 0.099 0.901 21 C 0.001 3.999 22 O -0.378 6.378 23 C -0.152 4.152 24 C -0.164 4.164 25 C -0.183 4.183 26 C -0.183 4.183 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.121 0.879 30 H 0.156 0.844 31 H 0.098 0.902 32 H 0.216 0.784 33 H -0.173 1.173 34 H -0.176 1.176 35 H 0.110 0.890 36 H 0.110 0.890 37 H 0.234 0.766 38 H 0.094 0.906 39 H 0.089 0.911 40 H 0.076 0.924 41 H 0.090 0.910 42 H 0.062 0.938 43 H 0.064 0.936 44 H 0.228 0.772 45 H 0.079 0.921 46 H 0.090 0.910 47 H 0.092 0.908 48 H 0.102 0.898 49 H 0.152 0.848 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -5.070 2.022 2.043 5.828 hybrid contribution -3.285 1.486 -0.425 3.630 sum -8.355 3.508 1.618 9.204 Atomic orbital electron populations 1.23111 0.77965 1.04425 1.01369 1.86114 1.21663 1.26278 1.88899 1.18797 0.91827 0.84637 0.98905 1.20131 0.91908 0.97131 1.04158 1.19498 0.96745 0.89868 1.03631 1.25215 0.90537 1.13643 0.89026 1.86696 1.73645 1.41906 1.31603 0.93108 0.91236 0.72046 0.79038 1.18623 0.90738 0.84646 1.00255 1.86121 1.33778 1.10949 1.89160 1.22475 0.93286 0.84278 1.03861 1.19973 0.88840 0.84158 0.76981 1.90790 1.14007 1.86496 1.47050 1.45948 1.10461 1.05042 1.76065 1.21007 0.94341 0.83124 0.97140 0.88983 1.21954 0.98007 1.02405 0.94773 1.21480 0.96117 0.97220 0.99722 1.21194 0.96232 0.99806 0.93577 0.90075 1.22226 0.96298 0.97765 0.83597 1.86483 1.37353 1.89664 1.24302 1.21524 0.97550 1.01695 0.94465 1.21820 0.97059 0.98283 0.99247 1.21037 0.92872 0.98658 1.05730 1.21078 1.00327 0.91455 1.05463 0.92523 0.92506 0.87851 0.84372 0.90217 0.78394 1.17341 1.17594 0.88976 0.88956 0.76553 0.90636 0.91083 0.92372 0.90978 0.93829 0.93643 0.77243 0.92078 0.91045 0.90806 0.89766 0.84775 0.84612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.32 -0.93 10.50 -19.68 -0.21 -1.13 16 3 C 0.10 0.33 6.69 -39.24 -0.26 0.06 16 4 C -0.12 -0.47 8.59 -39.45 -0.34 -0.81 16 5 C -0.10 -0.36 5.27 -104.49 -0.55 -0.91 16 6 C -0.08 -0.25 2.33 36.01 0.08 -0.16 16 7 O -0.53 -2.21 12.65 -35.23 -0.45 -2.66 16 8 Si 0.75 1.39 30.40 -169.99 -5.17 -3.78 16 9 C 0.10 0.25 6.62 -39.24 -0.26 -0.01 16 10 O -0.29 -0.66 8.56 -39.59 -0.34 -1.00 16 11 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 12 C 0.52 0.39 7.87 -10.99 -0.09 0.31 16 13 O -0.51 -2.76 16.16 -14.36 -0.23 -2.99 16 14 N -0.72 1.48 4.23 -53.81 -0.23 1.25 16 15 C 0.15 -0.19 2.78 -67.93 -0.19 -0.38 16 16 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 17 C -0.13 0.06 5.60 -26.73 -0.15 -0.09 16 18 C -0.11 0.10 4.94 -26.73 -0.13 -0.04 16 19 C -0.09 0.17 2.43 -90.62 -0.22 -0.05 16 20 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 21 C 0.08 -0.15 6.43 37.16 0.24 0.09 16 22 O -0.57 0.12 13.19 -35.23 -0.46 -0.35 16 23 C -0.11 0.42 5.03 -26.73 -0.13 0.29 16 24 C -0.13 0.40 5.61 -26.73 -0.15 0.25 16 25 C -0.16 -0.08 9.03 -39.45 -0.36 -0.44 16 26 C -0.16 -0.16 9.03 -39.45 -0.36 -0.51 16 27 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 28 H 0.06 -0.13 7.66 -51.93 -0.40 -0.52 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.14 0.57 4.94 -52.49 -0.26 0.31 16 31 H 0.08 0.24 7.82 -51.93 -0.41 -0.17 16 32 H 0.37 1.04 8.60 45.56 0.39 1.44 16 33 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 34 H -0.25 -1.02 6.81 56.52 0.38 -0.64 16 35 H 0.09 -0.33 7.65 -51.93 -0.40 -0.73 16 36 H 0.09 -0.33 7.67 -51.93 -0.40 -0.73 16 37 H 0.40 -1.87 6.87 -40.82 -0.28 -2.16 16 38 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 39 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 40 H 0.06 -0.07 7.60 -51.93 -0.39 -0.47 16 41 H 0.07 0.07 7.82 -51.93 -0.41 -0.34 16 42 H 0.04 -0.12 8.14 -51.93 -0.42 -0.55 16 43 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 44 H 0.38 -1.58 9.12 45.56 0.42 -1.16 16 45 H 0.06 -0.29 6.50 -51.93 -0.34 -0.63 16 46 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 47 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 48 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 49 H 0.13 -0.36 6.29 -52.48 -0.33 -0.69 16 50 H 0.14 -0.22 6.29 -52.49 -0.33 -0.55 16 LS Contribution 396.26 15.07 5.97 5.97 Total: 0.00 -9.63 396.26 -9.74 -19.37 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: -6.94 Total: -13.37 kcal Atomic # 6 Polarization: 0.38 SS G_CDS: -1.68 Total: -1.31 kcal Atomic # 7 Polarization: 1.48 SS G_CDS: -0.23 Total: 1.25 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -1.69 Total: -8.13 kcal Atomic # 14 Polarization: 1.39 SS G_CDS: -5.17 Total: -3.78 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -9.63 -9.74 -19.37 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.740 kcal (2) G-P(sol) polarization free energy of solvation -9.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -158.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -168.105 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds