Wall clock time and date at job start Mon Mar 8 2021 02:34:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35982 * 117.00117 * 2 1 4 4 C 1.38676 * 119.99975 * 180.02562 * 3 2 1 5 5 C 1.38151 * 119.99847 * 180.02562 * 4 3 2 6 6 C 1.50702 * 120.00066 * 180.02562 * 5 4 3 7 7 O 1.42901 * 109.46920 * 104.97809 * 6 5 4 8 8 Si 1.86298 * 109.47135 * 344.98399 * 6 5 4 9 9 C 1.38681 * 120.00136 * 0.02562 * 5 4 3 10 10 O 1.35982 * 119.99862 * 180.02562 * 9 5 4 11 11 C 1.42901 * 116.99779 * 179.97438 * 10 9 5 12 12 C 1.50699 * 109.47143 * 180.02562 * 11 10 9 13 13 O 1.21287 * 119.99956 * 359.97438 * 12 11 10 14 14 N 1.34777 * 120.00179 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00075 * 179.97438 * 14 12 11 16 16 H 1.09002 * 109.47092 * 324.99806 * 15 14 12 17 17 C 1.52997 * 109.47007 * 84.99755 * 15 14 12 18 18 C 1.53006 * 109.47127 * 60.00219 * 17 15 14 19 19 C 1.52997 * 109.47164 * 59.99836 * 18 17 15 20 20 H 1.09001 * 109.47375 * 59.99966 * 19 18 17 21 21 C 1.52996 * 109.46975 * 180.02562 * 19 18 17 22 22 O 1.42903 * 109.47203 * 294.99757 * 21 19 18 23 23 C 1.53002 * 109.46978 * 299.99874 * 19 18 17 24 24 C 1.52996 * 109.46891 * 60.00410 * 23 19 18 25 25 C 1.38714 * 119.99662 * 0.27321 * 9 5 4 26 26 C 1.38111 * 120.00133 * 359.45088 * 25 9 5 27 27 H 1.09006 * 109.46716 * 299.99310 * 1 2 3 28 28 H 1.09007 * 109.47254 * 59.99253 * 1 2 3 29 29 H 1.09003 * 109.47435 * 179.97438 * 1 2 3 30 30 H 1.08001 * 120.00076 * 0.04493 * 4 3 2 31 31 H 1.08996 * 109.47552 * 224.97879 * 6 5 4 32 32 H 0.96707 * 113.99806 * 60.00197 * 7 6 5 33 33 H 1.48508 * 109.99750 * 299.99412 * 8 6 5 34 34 H 1.48494 * 110.00241 * 61.31455 * 8 6 5 35 35 H 1.08999 * 109.46801 * 60.00349 * 11 10 9 36 36 H 1.08999 * 109.47123 * 300.00214 * 11 10 9 37 37 H 0.96997 * 119.99651 * 359.97438 * 14 12 11 38 38 H 1.08998 * 109.47533 * 179.97438 * 17 15 14 39 39 H 1.08996 * 109.47853 * 300.00060 * 17 15 14 40 40 H 1.09001 * 109.47002 * 299.99574 * 18 17 15 41 41 H 1.09000 * 109.47050 * 179.97438 * 18 17 15 42 42 H 1.08998 * 109.47611 * 54.99598 * 21 19 18 43 43 H 1.09001 * 109.47165 * 175.00100 * 21 19 18 44 44 H 0.96696 * 114.00572 * 180.02562 * 22 21 19 45 45 H 1.08992 * 109.47056 * 300.00064 * 23 19 18 46 46 H 1.09004 * 109.47006 * 180.02562 * 23 19 18 47 47 H 1.09004 * 109.47368 * 179.97438 * 24 23 19 48 48 H 1.09001 * 109.47372 * 59.99964 * 24 23 19 49 49 H 1.08011 * 119.99691 * 179.70299 * 25 9 5 50 50 H 1.07997 * 119.99673 * 180.25466 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2841 -0.0005 5 6 4.0584 2.5151 0.0000 6 6 5.5634 2.5940 -0.0012 7 8 6.0197 2.9677 -1.3028 8 14 6.2727 0.9319 0.4519 9 6 3.3031 3.6782 0.0016 10 8 3.9205 4.8897 0.0016 11 6 3.0806 6.0458 0.0027 12 6 3.9348 7.2874 0.0019 13 8 5.1439 7.1916 0.0010 14 7 3.3552 8.5041 0.0033 15 6 4.1856 9.7111 0.0031 16 1 5.0858 9.5329 0.5914 17 6 4.5767 10.0607 -1.4341 18 6 3.3132 10.3109 -2.2600 19 6 2.5260 11.4717 -1.6489 20 1 3.1438 12.3697 -1.6490 21 6 1.2622 11.7214 -2.4744 22 8 1.6279 12.1607 -3.7841 23 6 2.1349 11.1220 -0.2116 24 6 3.3983 10.8719 0.6142 25 6 1.9179 3.6055 0.0084 26 6 1.2909 2.3750 0.0021 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5140 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 4.0194 0.3784 -0.0017 31 1 5.8888 3.3383 0.7255 32 1 5.6888 3.8249 -1.6044 33 1 5.8056 0.5318 1.8036 34 1 5.8625 -0.0854 -0.5490 35 1 2.4521 6.0374 0.8933 36 1 2.4506 6.0381 -0.8867 37 1 2.3883 8.5807 0.0044 38 1 5.1942 10.9589 -1.4344 39 1 5.1376 9.2338 -1.8696 40 1 2.6954 9.4129 -2.2599 41 1 3.5919 10.5604 -3.2838 42 1 0.6880 10.7979 -2.5481 43 1 0.6573 12.4878 -1.9898 44 1 0.8747 12.3389 -4.3638 45 1 1.5171 10.2241 -0.2115 46 1 1.5736 11.9488 0.2236 47 1 3.1198 10.6232 1.6382 48 1 4.0162 11.7699 0.6140 49 1 1.3297 4.5114 0.0145 50 1 0.2124 2.3185 0.0033 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_4974302.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:46 Heat of formation + Delta-G solvation = -170.734066 kcal Electronic energy + Delta-G solvation = -31925.831599 eV Core-core repulsion = 27499.113770 eV Total energy + Delta-G solvation = -4426.717829 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.181 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -41.95845 -41.32627 -40.23353 -39.38410 -38.16993 -37.44079 -36.99749 -34.86526 -32.94743 -32.08616 -31.78735 -30.95445 -29.21429 -28.07087 -26.65200 -26.29378 -24.05076 -23.66386 -22.51608 -22.28032 -21.94570 -20.24505 -19.60984 -18.90409 -18.69173 -18.19434 -18.12170 -17.57502 -17.52504 -16.84836 -16.76537 -16.42845 -16.15384 -15.94019 -15.78510 -15.64088 -15.39863 -15.32307 -14.92140 -14.75370 -14.63238 -14.16287 -13.99155 -13.93154 -13.67505 -13.53293 -13.42415 -13.21539 -13.11259 -13.03865 -12.60260 -12.44020 -12.36827 -12.23435 -12.14118 -11.57260 -11.55291 -11.32608 -11.30640 -11.13740 -11.11064 -10.97802 -10.80926 -10.25735 -10.14126 -8.95227 -4.87674 -0.08743 0.19657 1.30868 1.42418 1.45861 1.58140 1.88677 2.21292 2.40797 2.54648 3.31258 3.40385 3.47166 3.60024 3.68130 3.72801 3.81601 3.89463 3.91074 3.97085 4.02023 4.04306 4.05090 4.10713 4.25795 4.28040 4.32232 4.32584 4.41242 4.42763 4.48067 4.50181 4.55162 4.66179 4.66685 4.73292 4.75644 4.85951 4.99023 5.01496 5.04964 5.05792 5.09346 5.15410 5.22439 5.27668 5.39684 5.42785 5.49143 6.04748 6.29300 6.44960 6.51739 6.90195 7.13268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.088 3.912 4 C -0.142 4.142 5 C -0.119 4.119 6 C -0.086 4.086 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.097 3.903 10 O -0.309 6.309 11 C 0.035 3.965 12 C 0.513 3.487 13 O -0.567 6.567 14 N -0.702 5.702 15 C 0.150 3.850 16 H 0.069 0.931 17 C -0.130 4.130 18 C -0.101 4.101 19 C -0.088 4.088 20 H 0.065 0.935 21 C 0.075 3.925 22 O -0.599 6.599 23 C -0.109 4.109 24 C -0.120 4.120 25 C -0.155 4.155 26 C -0.159 4.159 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.114 0.886 30 H 0.124 0.876 31 H 0.078 0.922 32 H 0.371 0.629 33 H -0.266 1.266 34 H -0.286 1.286 35 H 0.125 0.875 36 H 0.123 0.877 37 H 0.416 0.584 38 H 0.072 0.928 39 H 0.044 0.956 40 H 0.066 0.934 41 H 0.049 0.951 42 H 0.057 0.943 43 H 0.056 0.944 44 H 0.395 0.605 45 H 0.080 0.920 46 H 0.082 0.918 47 H 0.085 0.915 48 H 0.082 0.918 49 H 0.175 0.825 50 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.144 4.846 2.198 11.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.256 6.256 3 C 0.043 3.957 4 C -0.160 4.160 5 C -0.120 4.120 6 C -0.193 4.193 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.052 3.948 10 O -0.223 6.223 11 C -0.042 4.042 12 C 0.299 3.701 13 O -0.445 6.445 14 N -0.357 5.357 15 C 0.045 3.955 16 H 0.087 0.913 17 C -0.168 4.168 18 C -0.138 4.138 19 C -0.107 4.107 20 H 0.084 0.916 21 C -0.002 4.002 22 O -0.407 6.407 23 C -0.146 4.146 24 C -0.157 4.157 25 C -0.173 4.173 26 C -0.177 4.177 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.132 0.868 30 H 0.141 0.859 31 H 0.096 0.904 32 H 0.220 0.780 33 H -0.192 1.192 34 H -0.214 1.214 35 H 0.142 0.858 36 H 0.141 0.859 37 H 0.255 0.745 38 H 0.091 0.909 39 H 0.063 0.937 40 H 0.085 0.915 41 H 0.068 0.932 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.244 0.756 45 H 0.098 0.902 46 H 0.101 0.899 47 H 0.103 0.897 48 H 0.101 0.899 49 H 0.192 0.808 50 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -8.285 3.205 2.704 9.286 hybrid contribution -2.378 1.174 -0.676 2.736 sum -10.663 4.379 2.029 11.704 Atomic orbital electron populations 1.23391 0.75970 1.05717 1.02638 1.86080 1.23866 1.26639 1.89007 1.18984 0.91692 0.85645 0.99365 1.20157 0.92889 0.96870 1.06133 1.19557 0.96827 0.90601 1.05001 1.25393 0.91184 1.14222 0.88525 1.86654 1.73965 1.42230 1.32218 0.92486 0.90016 0.69773 0.76417 1.18701 0.91584 0.84302 1.00214 1.86097 1.35331 1.11641 1.89224 1.22759 0.92779 0.81954 1.06750 1.20455 0.88362 0.85393 0.75888 1.90774 1.16514 1.87297 1.49876 1.45802 1.11265 1.04068 1.74589 1.20916 0.94266 0.84177 0.96110 0.91263 1.21889 0.98174 1.01233 0.95534 1.21394 0.95940 0.98134 0.98365 1.21185 0.96116 0.98488 0.94906 0.91625 1.22337 0.96196 0.98721 0.82941 1.86448 1.38999 1.89884 1.25407 1.21510 0.97330 1.03012 0.92790 1.21782 0.97098 0.97128 0.99729 1.21464 0.92130 1.00027 1.03663 1.21433 1.01687 0.90671 1.03911 0.91105 0.91218 0.86762 0.85851 0.90392 0.78020 1.19184 1.21361 0.85784 0.85912 0.74510 0.90927 0.93718 0.91525 0.93220 0.92490 0.92570 0.75578 0.90193 0.89907 0.89667 0.89891 0.80819 0.81647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.17 10.50 -93.34 -0.98 -3.15 16 3 C 0.09 0.59 6.69 22.49 0.15 0.74 16 4 C -0.14 -1.43 8.59 22.35 0.19 -1.23 16 5 C -0.12 -1.05 5.27 -19.78 -0.10 -1.15 16 6 C -0.09 -0.74 2.33 71.24 0.17 -0.57 16 7 O -0.54 -5.69 12.65 -148.98 -1.89 -7.58 16 8 Si 0.81 4.85 30.40 68.60 2.09 6.94 16 9 C 0.10 0.44 6.62 22.49 0.15 0.59 16 10 O -0.31 -1.36 8.56 -74.31 -0.64 -2.00 16 11 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 12 C 0.51 0.66 7.87 87.66 0.69 1.35 16 13 O -0.57 -7.13 16.16 15.99 0.26 -6.87 16 14 N -0.70 3.60 4.23 -442.53 -1.87 1.73 16 15 C 0.15 -0.34 2.78 44.99 0.13 -0.21 16 16 H 0.07 0.20 7.58 -2.39 -0.02 0.18 16 17 C -0.13 -0.07 5.60 30.60 0.17 0.10 16 18 C -0.10 0.15 4.94 30.60 0.15 0.30 16 19 C -0.09 0.40 2.43 -10.80 -0.03 0.37 16 20 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 21 C 0.08 -0.39 6.43 71.98 0.46 0.07 16 22 O -0.60 0.43 13.19 -148.98 -1.97 -1.54 16 23 C -0.11 1.03 5.03 30.59 0.15 1.19 16 24 C -0.12 0.89 5.61 30.59 0.17 1.06 16 25 C -0.15 0.22 9.03 22.35 0.20 0.42 16 26 C -0.16 -0.01 9.03 22.35 0.20 0.20 16 27 H 0.07 -0.46 7.66 -2.38 -0.02 -0.47 16 28 H 0.07 -0.43 7.66 -2.38 -0.02 -0.45 16 29 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 30 H 0.12 1.43 4.94 -2.91 -0.01 1.41 16 31 H 0.08 0.64 7.82 -2.39 -0.02 0.62 16 32 H 0.37 2.95 8.60 -74.05 -0.64 2.31 16 33 H -0.27 -2.22 7.11 99.48 0.71 -1.51 16 34 H -0.29 -3.28 6.81 99.48 0.68 -2.61 16 35 H 0.12 -1.34 7.65 -2.39 -0.02 -1.36 16 36 H 0.12 -1.30 7.67 -2.39 -0.02 -1.32 16 37 H 0.42 -5.06 6.87 -92.71 -0.64 -5.70 16 38 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 39 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 40 H 0.07 -0.23 7.60 -2.39 -0.02 -0.25 16 41 H 0.05 0.16 7.82 -2.39 -0.02 0.14 16 42 H 0.06 -0.45 8.14 -2.39 -0.02 -0.47 16 43 H 0.06 -0.41 8.14 -2.39 -0.02 -0.43 16 44 H 0.39 -3.44 9.12 -74.06 -0.68 -4.12 16 45 H 0.08 -1.04 6.50 -2.39 -0.02 -1.05 16 46 H 0.08 -0.88 8.14 -2.38 -0.02 -0.90 16 47 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 48 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 49 H 0.17 -1.76 6.29 -2.91 -0.02 -1.78 16 50 H 0.17 -1.08 6.29 -2.91 -0.02 -1.10 16 Total: 0.00 -27.12 396.26 -1.61 -28.73 By element: Atomic # 1 Polarization: -19.80 SS G_CDS: -0.95 Total: -20.75 kcal Atomic # 6 Polarization: 0.15 SS G_CDS: 4.34 Total: 4.49 kcal Atomic # 7 Polarization: 3.60 SS G_CDS: -1.87 Total: 1.73 kcal Atomic # 8 Polarization: -15.93 SS G_CDS: -5.21 Total: -21.13 kcal Atomic # 14 Polarization: 4.85 SS G_CDS: 2.09 Total: 6.94 kcal Total: -27.12 -1.61 -28.73 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_4974302.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -142.006 kcal (2) G-P(sol) polarization free energy of solvation -27.120 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -169.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.734 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds