Wall clock time and date at job start Mon Mar 8 2021 02:34:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37643 * 125.67708 * 2 1 4 4 C 1.46666 * 126.22375 * 0.02562 * 3 2 1 5 5 O 1.21695 * 120.00093 * 355.08469 * 4 3 2 6 6 N 1.34780 * 120.00028 * 175.08432 * 4 3 2 7 7 C 1.46502 * 120.00215 * 184.68921 * 6 4 3 8 8 H 1.09003 * 109.46804 * 35.00153 * 7 6 4 9 9 C 1.53004 * 109.47159 * 155.00169 * 7 6 4 10 10 C 1.53001 * 109.46889 * 59.99909 * 9 7 6 11 11 C 1.53002 * 109.46890 * 60.00268 * 10 9 7 12 12 H 1.08995 * 109.47348 * 60.00263 * 11 10 9 13 13 C 1.53002 * 109.46565 * 179.97438 * 11 10 9 14 14 O 1.42901 * 109.46880 * 184.99892 * 13 11 10 15 15 C 1.52995 * 109.46990 * 299.99153 * 11 10 9 16 16 C 1.53002 * 109.46933 * 60.00879 * 15 11 10 17 17 C 1.37884 * 107.54877 * 180.02562 * 3 2 1 18 18 C 1.39877 * 107.09195 * 359.76540 * 17 3 2 19 19 Br 1.89099 * 126.07287 * 180.23855 * 18 17 3 20 20 C 1.35499 * 107.85384 * 0.38487 * 18 17 3 21 21 C 1.50704 * 125.57240 * 179.87897 * 20 18 17 22 22 O 1.42897 * 109.47255 * 118.67232 * 21 20 18 23 23 Si 1.86300 * 109.46960 * 238.67282 * 21 20 18 24 24 H 1.09005 * 109.46982 * 275.83180 * 1 2 3 25 25 H 1.08996 * 109.47597 * 35.82539 * 1 2 3 26 26 H 1.08998 * 109.47256 * 155.82830 * 1 2 3 27 27 H 0.97001 * 119.99991 * 4.69314 * 6 4 3 28 28 H 1.08997 * 109.46771 * 180.02562 * 9 7 6 29 29 H 1.09002 * 109.46614 * 299.99977 * 9 7 6 30 30 H 1.09002 * 109.46723 * 179.97438 * 10 9 7 31 31 H 1.08996 * 109.46956 * 299.99709 * 10 9 7 32 32 H 1.09002 * 109.47240 * 304.99669 * 13 11 10 33 33 H 1.08996 * 109.47455 * 64.99731 * 13 11 10 34 34 H 0.96705 * 114.00216 * 179.97438 * 14 13 11 35 35 H 1.09004 * 109.47205 * 180.02562 * 15 11 10 36 36 H 1.08995 * 109.47981 * 300.00721 * 15 11 10 37 37 H 1.09002 * 109.47043 * 179.97438 * 16 15 11 38 38 H 1.08996 * 109.47655 * 59.99120 * 16 15 11 39 39 H 1.07999 * 126.45378 * 180.02562 * 17 3 2 40 40 H 1.08999 * 109.46858 * 358.67333 * 21 20 18 41 41 H 0.96704 * 113.99988 * 60.00361 * 22 21 20 42 42 H 1.48500 * 110.00087 * 56.29257 * 23 21 20 43 43 H 1.48507 * 109.99805 * 177.60886 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 0.6250 2.7644 -0.0893 6 7 2.7082 3.5140 0.1005 7 6 2.2478 4.9009 0.2045 8 1 1.3228 4.9344 0.7802 9 6 3.3162 5.7416 0.9066 10 6 4.6146 5.6944 0.0985 11 6 4.3638 6.2551 -1.3028 12 1 4.0214 7.2870 -1.2254 13 6 5.6624 6.2084 -2.1105 14 8 5.4582 6.8376 -3.3772 15 6 3.2956 5.4144 -2.0048 16 6 1.9971 5.4615 -1.1968 17 6 3.5781 0.6891 -0.0006 18 6 3.5528 -0.7095 0.0045 19 35 5.0609 -1.8503 0.0126 20 6 2.2558 -1.1015 -0.0006 21 6 1.7713 -2.5285 -0.0003 22 8 1.0008 -2.7697 1.1787 23 14 0.7136 -2.8255 -1.5049 24 1 -0.3633 0.1044 1.0224 25 1 -0.3634 0.8332 -0.6015 26 1 -0.3634 -0.9375 -0.4208 27 1 3.6579 3.3167 0.1035 28 1 2.9735 6.7733 0.9843 29 1 3.4948 5.3421 1.9049 30 1 5.3756 6.2937 0.5984 31 1 4.9571 4.6625 0.0212 32 1 6.4477 6.7333 -1.5666 33 1 5.9579 5.1706 -2.2638 34 1 6.2420 6.8451 -3.9436 35 1 3.1172 5.8135 -3.0033 36 1 3.6380 4.3825 -2.0822 37 1 1.2359 4.8629 -1.6972 38 1 1.6546 6.4934 -1.1193 39 1 4.4583 1.3150 -0.0004 40 1 2.6274 -3.2029 -0.0191 41 1 0.2211 -2.2037 1.2617 42 1 1.4756 -2.4922 -2.7352 43 1 0.2769 -4.2443 -1.5467 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:34:53 Heat of formation + Delta-G solvation = -73.520642 kcal Electronic energy + Delta-G solvation = -26898.595283 eV Core-core repulsion = 22991.977174 eV Total energy + Delta-G solvation = -3906.618109 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.072 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.91441 -41.09844 -39.33324 -37.91549 -37.43637 -35.10553 -34.31516 -32.56540 -31.78581 -31.38421 -30.76330 -27.39238 -27.23533 -26.07924 -23.71424 -23.40562 -22.21767 -21.76973 -20.68936 -20.14554 -19.08045 -18.24008 -18.07936 -17.35055 -16.98464 -16.71421 -16.45299 -16.08514 -15.91239 -15.65017 -15.28693 -14.88158 -14.84992 -14.56245 -14.42017 -14.33137 -14.24670 -13.90340 -13.72897 -13.44155 -13.22696 -13.16765 -13.00474 -12.94419 -12.42199 -12.38303 -12.11425 -11.94596 -11.55307 -11.34766 -11.30040 -11.10798 -11.05591 -10.85932 -10.79703 -10.15133 -9.81694 -9.29544 -5.24522 0.14097 0.59646 0.89248 1.17194 1.43606 1.53092 1.80577 2.18065 2.28951 3.16871 3.32181 3.39565 3.52559 3.69124 3.72988 3.77164 3.88232 3.93550 4.07301 4.24863 4.30451 4.31362 4.40107 4.42362 4.45572 4.49890 4.53522 4.61486 4.67480 4.70452 4.75290 4.79071 5.04139 5.06720 5.12918 5.18218 5.23239 5.25641 5.42136 5.44851 5.51854 5.55896 5.82021 6.42357 6.42673 6.89860 7.07660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.394 5.394 3 C -0.043 4.043 4 C 0.592 3.408 5 O -0.568 6.568 6 N -0.697 5.697 7 C 0.152 3.848 8 H 0.079 0.921 9 C -0.120 4.120 10 C -0.111 4.111 11 C -0.087 4.087 12 H 0.070 0.930 13 C 0.075 3.925 14 O -0.597 6.597 15 C -0.102 4.102 16 C -0.127 4.127 17 C -0.108 4.108 18 C -0.181 4.181 19 Br -0.028 7.028 20 C 0.047 3.953 21 C -0.053 4.053 22 O -0.540 6.540 23 Si 0.753 3.247 24 H 0.108 0.892 25 H 0.108 0.892 26 H 0.111 0.889 27 H 0.411 0.589 28 H 0.088 0.912 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.072 0.928 32 H 0.056 0.944 33 H 0.052 0.948 34 H 0.394 0.606 35 H 0.050 0.950 36 H 0.059 0.941 37 H 0.049 0.951 38 H 0.077 0.923 39 H 0.174 0.826 40 H 0.127 0.873 41 H 0.390 0.610 42 H -0.285 1.285 43 H -0.266 1.266 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.625 2.766 1.161 3.064 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.067 5.067 3 C -0.157 4.157 4 C 0.379 3.621 5 O -0.449 6.449 6 N -0.350 5.350 7 C 0.048 3.952 8 H 0.097 0.903 9 C -0.158 4.158 10 C -0.149 4.149 11 C -0.105 4.105 12 H 0.088 0.912 13 C -0.003 4.003 14 O -0.405 6.405 15 C -0.140 4.140 16 C -0.166 4.166 17 C -0.135 4.135 18 C -0.267 4.267 19 Br 0.056 6.944 20 C -0.074 4.074 21 C -0.163 4.163 22 O -0.347 6.347 23 Si 0.654 3.346 24 H 0.127 0.873 25 H 0.126 0.874 26 H 0.128 0.872 27 H 0.249 0.751 28 H 0.107 0.893 29 H 0.102 0.898 30 H 0.101 0.899 31 H 0.091 0.909 32 H 0.074 0.926 33 H 0.070 0.930 34 H 0.244 0.756 35 H 0.069 0.931 36 H 0.078 0.922 37 H 0.068 0.932 38 H 0.095 0.905 39 H 0.192 0.808 40 H 0.144 0.856 41 H 0.239 0.761 42 H -0.211 1.211 43 H -0.192 1.192 Dipole moment (debyes) X Y Z Total from point charges -0.299 1.789 0.743 1.960 hybrid contribution 1.413 -0.019 -0.214 1.429 sum 1.114 1.770 0.528 2.157 Atomic orbital electron populations 1.22768 0.73731 1.05732 1.06559 1.43879 1.07905 1.03490 1.51420 1.20086 0.89989 0.87877 1.17752 1.16904 0.85585 0.83504 0.76070 1.90802 1.17216 1.85034 1.51871 1.45710 1.10018 1.05764 1.73469 1.20994 0.98491 0.79373 0.96301 0.90295 1.21798 0.94115 1.00814 0.99096 1.21520 0.97812 1.01963 0.93591 1.21169 0.94386 1.00227 0.94734 0.91185 1.22338 0.97136 0.96657 0.84155 1.86440 1.42334 1.82039 1.29727 1.21391 0.94548 0.99663 0.98364 1.21881 0.97613 1.01461 0.95644 1.21461 0.95843 0.92739 1.03460 1.20962 0.91399 0.94950 1.19414 1.96653 1.36137 1.63341 1.98257 1.20835 0.89896 0.90270 1.06435 1.24981 1.01351 0.90196 0.99792 1.86593 1.42441 1.63810 1.41866 0.94420 0.84690 0.82710 0.72740 0.87350 0.87375 0.87170 0.75065 0.89328 0.89827 0.89907 0.90918 0.92558 0.92963 0.75638 0.93112 0.92246 0.93231 0.90483 0.80828 0.85622 0.76059 1.21123 1.19162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.29 8.82 127.77 1.13 0.83 16 2 N -0.39 -0.11 3.11 -519.62 -1.61 -1.73 16 3 C -0.04 -0.08 6.88 40.35 0.28 0.20 16 4 C 0.59 1.56 7.73 86.44 0.67 2.23 16 5 O -0.57 -4.45 14.46 -4.33 -0.06 -4.51 16 6 N -0.70 1.72 4.22 -446.49 -1.88 -0.16 16 7 C 0.15 -0.36 2.75 44.99 0.12 -0.24 16 8 H 0.08 0.05 7.65 -2.39 -0.02 0.03 16 9 C -0.12 0.81 5.61 30.60 0.17 0.98 16 10 C -0.11 0.84 5.03 30.60 0.15 0.99 16 11 C -0.09 0.28 2.43 -10.79 -0.03 0.26 16 12 H 0.07 -0.07 8.14 -2.39 -0.02 -0.08 16 13 C 0.07 -0.25 6.43 71.98 0.46 0.21 16 14 O -0.60 -0.32 13.20 -148.98 -1.97 -2.28 16 15 C -0.10 0.04 4.94 30.59 0.15 0.19 16 16 C -0.13 0.00 5.60 30.60 0.17 0.17 16 17 C -0.11 -0.09 10.34 22.58 0.23 0.15 16 18 C -0.18 -0.68 6.53 22.03 0.14 -0.54 16 19 Br -0.03 -0.11 33.05 -20.37 -0.67 -0.79 16 20 C 0.05 0.10 5.23 41.34 0.22 0.32 16 21 C -0.05 -0.04 2.88 71.24 0.20 0.17 16 22 O -0.54 0.04 12.88 -148.98 -1.92 -1.88 16 23 Si 0.75 -1.08 29.63 68.60 2.03 0.95 16 24 H 0.11 -0.94 8.14 -2.38 -0.02 -0.96 16 25 H 0.11 -0.33 6.56 -2.39 -0.02 -0.35 16 26 H 0.11 -1.28 3.97 -2.39 -0.01 -1.29 16 27 H 0.41 -2.71 5.76 -92.71 -0.53 -3.24 16 28 H 0.09 -0.63 8.14 -2.39 -0.02 -0.65 16 29 H 0.08 -0.65 8.14 -2.39 -0.02 -0.67 16 30 H 0.08 -0.73 8.14 -2.39 -0.02 -0.75 16 31 H 0.07 -0.68 6.50 -2.39 -0.02 -0.70 16 32 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 33 H 0.05 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.39 -2.88 9.12 -74.05 -0.68 -3.56 16 35 H 0.05 0.20 7.82 -2.39 -0.02 0.18 16 36 H 0.06 -0.03 7.60 -2.39 -0.02 -0.04 16 37 H 0.05 0.22 8.11 -2.39 -0.02 0.21 16 38 H 0.08 -0.05 8.14 -2.39 -0.02 -0.07 16 39 H 0.17 -0.81 7.45 -2.91 -0.02 -0.83 16 40 H 0.13 0.35 6.94 -2.39 -0.02 0.33 16 41 H 0.39 -3.23 7.03 -74.05 -0.52 -3.75 16 42 H -0.28 -1.53 7.11 99.48 0.71 -0.83 16 43 H -0.27 -0.91 7.11 99.48 0.71 -0.20 16 Total: 0.00 -19.68 355.61 -2.63 -22.32 By element: Atomic # 1 Polarization: -17.21 SS G_CDS: -0.63 Total: -17.84 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: 4.08 Total: 5.92 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -3.50 Total: -1.89 kcal Atomic # 8 Polarization: -4.73 SS G_CDS: -3.95 Total: -8.67 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: 2.03 Total: 0.95 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.67 Total: -0.79 kcal Total: -19.68 -2.63 -22.32 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.204 kcal (2) G-P(sol) polarization free energy of solvation -19.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.889 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.316 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds