Wall clock time and date at job start Mon Mar 8 2021 02:35:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86298 * 109.47725 * 2 1 4 4 C 1.50705 * 109.47171 * 240.00020 * 2 1 3 5 5 C 1.38238 * 119.94258 * 119.72187 * 4 2 1 6 6 C 1.38185 * 120.07139 * 179.76767 * 5 4 2 7 7 C 1.38676 * 119.95245 * 0.51657 * 6 5 4 8 8 O 1.35919 * 120.05933 * 179.76986 * 7 6 5 9 9 C 1.42899 * 117.00093 * 359.96606 * 8 7 6 10 10 C 1.50701 * 109.47616 * 180.02562 * 9 8 7 11 11 O 1.21279 * 119.99387 * 0.02562 * 10 9 8 12 12 N 1.34764 * 120.00293 * 180.02562 * 10 9 8 13 13 C 1.46502 * 120.00328 * 179.97438 * 12 10 9 14 14 H 1.09008 * 109.46608 * 35.00348 * 13 12 10 15 15 C 1.52998 * 109.47494 * 154.99659 * 13 12 10 16 16 C 1.53001 * 109.46804 * 60.00325 * 15 13 12 17 17 C 1.52995 * 109.47277 * 60.00096 * 16 15 13 18 18 H 1.09000 * 109.47417 * 59.99955 * 17 16 15 19 19 C 1.53001 * 109.47277 * 180.02562 * 17 16 15 20 20 O 1.42903 * 109.47141 * 184.99857 * 19 17 16 21 21 C 1.53002 * 109.46905 * 299.99963 * 17 16 15 22 22 C 1.52991 * 109.47288 * 275.00294 * 13 12 10 23 23 C 1.38832 * 119.88662 * 359.73980 * 7 6 5 24 24 Br 1.89098 * 120.03907 * 179.97438 * 23 7 6 25 25 C 1.38203 * 119.92370 * 0.02562 * 23 7 6 26 26 H 0.96709 * 113.99337 * 300.00145 * 1 2 3 27 27 H 1.09004 * 109.47533 * 120.00158 * 2 1 3 28 28 H 1.48506 * 109.99834 * 300.00610 * 3 2 1 29 29 H 1.48502 * 110.00011 * 61.31874 * 3 2 1 30 30 H 1.07999 * 119.96070 * 0.02871 * 5 4 2 31 31 H 1.07996 * 120.02302 * 180.23105 * 6 5 4 32 32 H 1.08997 * 109.47261 * 300.00927 * 9 8 7 33 33 H 1.09009 * 109.46923 * 60.00732 * 9 8 7 34 34 H 0.97005 * 120.00473 * 0.02562 * 12 10 9 35 35 H 1.08993 * 109.47701 * 180.02562 * 15 13 12 36 36 H 1.09006 * 109.47358 * 300.00630 * 15 13 12 37 37 H 1.09005 * 109.47153 * 180.02562 * 16 15 13 38 38 H 1.09001 * 109.47457 * 299.99721 * 16 15 13 39 39 H 1.08993 * 109.46978 * 304.99704 * 19 17 16 40 40 H 1.09003 * 109.46939 * 65.00449 * 19 17 16 41 41 H 0.96695 * 114.00005 * 179.97438 * 20 19 17 42 42 H 1.09006 * 109.47138 * 179.97438 * 21 17 16 43 43 H 1.08994 * 109.47313 * 299.99329 * 21 17 16 44 44 H 1.09000 * 109.47539 * 59.99272 * 22 13 12 45 45 H 1.09000 * 109.47502 * 179.97438 * 22 13 12 46 46 H 1.08000 * 119.97685 * 180.02562 * 25 23 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7212 -0.0358 -2.1426 6 6 3.1873 -0.6860 -3.2693 7 6 2.8532 -2.0136 -3.4906 8 8 3.3066 -2.6539 -4.6005 9 6 4.1225 -1.8980 -5.4977 10 6 4.5274 -2.7661 -6.6611 11 8 4.1535 -3.9185 -6.7166 12 7 5.3048 -2.2620 -7.6396 13 6 5.6989 -3.1061 -8.7703 14 1 4.8852 -3.7890 -9.0148 15 6 6.0060 -2.2244 -9.9824 16 6 7.1481 -1.2657 -9.6393 17 6 8.3943 -2.0704 -9.2651 18 1 8.6875 -2.6985 -10.1063 19 6 9.5362 -1.1118 -8.9214 20 8 10.7310 -1.8593 -8.6852 21 6 8.0871 -2.9521 -8.0530 22 6 6.9451 -3.9108 -8.3961 23 6 2.0554 -2.6878 -2.5760 24 35 1.5966 -4.4980 -2.8738 25 6 1.5960 -2.0342 -1.4483 26 1 -0.3932 0.4418 0.7651 27 1 1.7924 -0.5139 0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5881 2.4585 1.2242 30 1 2.9778 0.9993 -1.9721 31 1 3.8074 -0.1592 -3.9794 32 1 3.5603 -1.0391 -5.8640 33 1 5.0141 -1.5524 -4.9743 34 1 5.6041 -1.3404 -7.5951 35 1 6.2988 -2.8524 -10.8238 36 1 5.1181 -1.6510 -10.2491 37 1 7.3666 -0.6372 -10.5027 38 1 6.8549 -0.6376 -8.7981 39 1 9.6959 -0.4244 -9.7520 40 1 9.2786 -0.5461 -8.0259 41 1 11.4980 -1.3146 -8.4617 42 1 8.9749 -3.5258 -7.7866 43 1 7.7941 -2.3241 -7.2118 44 1 6.7263 -4.5389 -7.5326 45 1 7.2380 -4.5392 -9.2372 46 1 0.9756 -2.5580 -0.7362 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207534_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:35:01 Heat of formation + Delta-G solvation = -124.743631 kcal Electronic energy + Delta-G solvation = -29193.418321 eV Core-core repulsion = 24903.096595 eV Total energy + Delta-G solvation = -4290.321726 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.076 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.74919 -41.12064 -39.71800 -38.88864 -37.57219 -37.34286 -34.84792 -33.59238 -32.21504 -31.92241 -31.81975 -30.36623 -29.38689 -26.57674 -26.19977 -24.10354 -23.77920 -22.54357 -22.17703 -21.91587 -20.28505 -19.55337 -18.72479 -18.52065 -18.26052 -17.56333 -17.34110 -16.95175 -16.71004 -16.48210 -15.93417 -15.83067 -15.76452 -15.56774 -15.08342 -14.98007 -14.84895 -14.59941 -14.19399 -14.04250 -13.98233 -13.88030 -13.53776 -13.48238 -13.29038 -13.11867 -12.66496 -12.56514 -12.32847 -12.26729 -12.11420 -11.85473 -11.74539 -11.66751 -11.41903 -11.20815 -10.99132 -10.93436 -10.85547 -10.58053 -10.11479 -9.91399 -9.27162 -5.06726 -0.03904 0.12229 0.76864 1.19632 1.38228 1.50539 1.52202 1.86834 2.35590 2.47832 3.09599 3.20290 3.40185 3.54831 3.56510 3.61050 3.68923 3.74771 3.79795 3.85170 3.86044 3.93020 4.05863 4.13332 4.22901 4.26336 4.33544 4.34990 4.40779 4.43180 4.50599 4.56948 4.60384 4.64216 4.80947 4.87360 4.93694 4.95097 4.99912 5.01793 5.20244 5.23861 5.32604 5.34491 5.42618 5.47226 6.01714 6.35917 6.36782 6.60728 7.12758 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.072 4.072 3 Si 0.681 3.319 4 C -0.106 4.106 5 C -0.058 4.058 6 C -0.200 4.200 7 C 0.160 3.840 8 O -0.273 6.273 9 C 0.036 3.964 10 C 0.516 3.484 11 O -0.506 6.506 12 N -0.720 5.720 13 C 0.148 3.852 14 H 0.092 0.908 15 C -0.126 4.126 16 C -0.114 4.114 17 C -0.090 4.090 18 H 0.080 0.920 19 C 0.079 3.921 20 O -0.573 6.573 21 C -0.108 4.108 22 C -0.133 4.133 23 C -0.123 4.123 24 Br -0.025 7.025 25 C -0.022 4.022 26 H 0.381 0.619 27 H 0.079 0.921 28 H -0.254 1.254 29 H -0.259 1.259 30 H 0.137 0.863 31 H 0.142 0.858 32 H 0.096 0.904 33 H 0.097 0.903 34 H 0.399 0.601 35 H 0.083 0.917 36 H 0.073 0.927 37 H 0.071 0.929 38 H 0.061 0.939 39 H 0.045 0.955 40 H 0.044 0.956 41 H 0.380 0.620 42 H 0.071 0.929 43 H 0.058 0.942 44 H 0.070 0.930 45 H 0.075 0.925 46 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.054 7.779 0.025 9.277 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.582 3.418 4 C -0.107 4.107 5 C -0.076 4.076 6 C -0.220 4.220 7 C 0.112 3.888 8 O -0.184 6.184 9 C -0.043 4.043 10 C 0.300 3.700 11 O -0.379 6.379 12 N -0.376 5.376 13 C 0.044 3.956 14 H 0.110 0.890 15 C -0.164 4.164 16 C -0.152 4.152 17 C -0.108 4.108 18 H 0.099 0.901 19 C 0.001 3.999 20 O -0.378 6.378 21 C -0.145 4.145 22 C -0.172 4.172 23 C -0.203 4.203 24 Br 0.060 6.940 25 C -0.042 4.042 26 H 0.229 0.771 27 H 0.097 0.903 28 H -0.178 1.178 29 H -0.184 1.184 30 H 0.154 0.846 31 H 0.159 0.841 32 H 0.114 0.886 33 H 0.115 0.885 34 H 0.235 0.765 35 H 0.102 0.898 36 H 0.092 0.908 37 H 0.089 0.911 38 H 0.080 0.920 39 H 0.063 0.937 40 H 0.062 0.938 41 H 0.227 0.773 42 H 0.090 0.910 43 H 0.077 0.923 44 H 0.089 0.911 45 H 0.093 0.907 46 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 4.036 6.048 -0.891 7.326 hybrid contribution -0.405 1.517 0.734 1.734 sum 3.631 7.565 -0.157 8.393 Atomic orbital electron populations 1.86597 1.17678 1.80157 1.49856 1.24741 0.84594 1.10863 0.97932 0.95211 0.91550 0.74495 0.80578 1.19149 1.00800 0.93885 0.96860 1.20854 0.95187 0.99248 0.92309 1.21125 1.06460 0.93405 1.00982 1.18626 0.92964 0.90753 0.86452 1.86291 1.63835 1.38007 1.30303 1.22570 0.96333 0.94735 0.90635 1.19930 0.78845 0.88125 0.83143 1.90806 1.53123 1.17369 1.76635 1.45935 1.52441 1.15951 1.23239 1.20998 0.97419 0.92366 0.84819 0.89021 1.21818 0.98778 0.98438 0.97366 1.21523 0.94354 0.97756 1.01580 1.21194 0.93206 0.96955 0.99458 0.90123 1.22227 0.85317 0.93359 0.98974 1.86484 1.20238 1.38096 1.92999 1.21477 0.98415 0.97730 0.96885 1.21954 0.94471 0.98085 1.02661 1.21127 1.06517 0.93994 0.98677 1.96802 1.92133 1.08405 1.96615 1.20848 0.95434 0.93576 0.94360 0.77065 0.90298 1.17828 1.18435 0.84592 0.84082 0.88619 0.88524 0.76540 0.89814 0.90798 0.91068 0.92017 0.93660 0.93774 0.77257 0.91010 0.92305 0.91098 0.90687 0.83938 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.35 12.74 -35.23 -0.45 -0.80 16 2 C -0.07 0.06 2.81 36.01 0.10 0.16 16 3 Si 0.68 -1.29 29.78 -169.99 -5.06 -6.36 16 4 C -0.11 -0.07 5.42 -104.60 -0.57 -0.64 16 5 C -0.06 0.04 8.66 -39.60 -0.34 -0.30 16 6 C -0.20 0.13 9.04 -39.44 -0.36 -0.22 16 7 C 0.16 0.34 6.68 -39.20 -0.26 0.08 16 8 O -0.27 -0.79 9.01 -39.40 -0.35 -1.15 16 9 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 10 C 0.52 0.60 7.87 -10.99 -0.09 0.51 16 11 O -0.51 -3.16 16.16 -14.35 -0.23 -3.40 16 12 N -0.72 1.35 4.23 -53.81 -0.23 1.13 16 13 C 0.15 -0.15 2.78 -67.94 -0.19 -0.34 16 14 H 0.09 0.09 7.58 -51.92 -0.39 -0.31 16 15 C -0.13 0.38 5.61 -26.73 -0.15 0.23 16 16 C -0.11 0.42 5.03 -26.73 -0.13 0.28 16 17 C -0.09 0.17 2.43 -90.62 -0.22 -0.05 16 18 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 19 C 0.08 -0.16 6.43 37.16 0.24 0.08 16 20 O -0.57 0.15 13.19 -35.23 -0.46 -0.31 16 21 C -0.11 0.09 4.94 -26.73 -0.13 -0.04 16 22 C -0.13 0.03 5.60 -26.73 -0.15 -0.12 16 23 C -0.12 -0.39 6.24 -39.37 -0.25 -0.63 16 24 Br -0.03 -0.11 33.16 -68.01 -2.26 -2.36 16 25 C -0.02 -0.04 9.35 -39.58 -0.37 -0.41 16 26 H 0.38 -1.26 8.74 45.56 0.40 -0.86 16 27 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 29 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 30 H 0.14 -0.42 4.87 -52.49 -0.26 -0.67 16 31 H 0.14 -0.57 6.30 -52.49 -0.33 -0.90 16 32 H 0.10 -0.37 7.66 -51.93 -0.40 -0.77 16 33 H 0.10 -0.39 7.66 -51.92 -0.40 -0.79 16 34 H 0.40 -1.89 6.87 -40.82 -0.28 -2.17 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 38 H 0.06 -0.30 6.51 -51.93 -0.34 -0.63 16 39 H 0.05 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.04 -0.13 8.14 -51.93 -0.42 -0.55 16 41 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 42 H 0.07 0.07 7.82 -51.93 -0.41 -0.34 16 43 H 0.06 -0.08 7.60 -51.93 -0.39 -0.47 16 44 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 45 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 46 H 0.14 0.20 8.06 -52.49 -0.42 -0.23 16 LS Contribution 388.49 15.07 5.85 5.85 Total: 0.00 -10.84 388.49 -11.67 -22.51 By element: Atomic # 1 Polarization: -8.03 SS G_CDS: -5.80 Total: -13.82 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -2.68 Total: -1.30 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.23 Total: 1.13 kcal Atomic # 8 Polarization: -4.15 SS G_CDS: -1.50 Total: -5.65 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.06 Total: -6.36 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -10.84 -11.67 -22.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.233 kcal (2) G-P(sol) polarization free energy of solvation -10.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.077 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds