Wall clock time and date at job start Mon Mar 8 2021 02:35:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35962 * 116.99802 * 2 1 4 4 C 1.39453 * 120.12042 * 179.97438 * 3 2 1 5 5 O 1.34784 * 133.24201 * 359.93773 * 4 3 2 6 6 C 1.34919 * 110.84113 * 180.02562 * 5 4 3 7 7 C 1.46995 * 125.14056 * 179.97438 * 6 5 4 8 8 O 1.21652 * 119.99988 * 180.02562 * 7 6 5 9 9 N 1.34781 * 119.99817 * 0.02562 * 7 6 5 10 10 C 1.46499 * 119.99874 * 179.97438 * 9 7 6 11 11 H 1.09002 * 109.47391 * 325.00213 * 10 9 7 12 12 C 1.53000 * 109.46840 * 85.00543 * 10 9 7 13 13 C 1.52996 * 109.47328 * 59.99969 * 12 10 9 14 14 C 1.52993 * 109.47473 * 60.00001 * 13 12 10 15 15 H 1.09004 * 109.46998 * 59.99561 * 14 13 12 16 16 C 1.52996 * 109.47469 * 180.02562 * 14 13 12 17 17 O 1.42903 * 109.46756 * 294.99574 * 16 14 13 18 18 C 1.53008 * 109.46733 * 300.00094 * 14 13 12 19 19 C 1.52996 * 109.47409 * 60.00092 * 18 14 13 20 20 C 1.35813 * 109.72233 * 0.24189 * 6 5 4 21 21 C 1.40608 * 119.14042 * 179.97438 * 4 3 2 22 22 C 1.39780 * 120.11677 * 0.02562 * 21 4 3 23 23 C 1.50693 * 120.09362 * 180.02562 * 22 21 4 24 24 O 1.42899 * 109.47449 * 284.99769 * 23 22 21 25 25 Si 1.86304 * 109.47340 * 164.99988 * 23 22 21 26 26 C 1.36631 * 119.81173 * 359.97438 * 22 21 4 27 27 C 1.38257 * 120.12506 * 0.02562 * 3 2 1 28 28 H 1.09003 * 109.47546 * 299.99727 * 1 2 3 29 29 H 1.08997 * 109.47498 * 59.99672 * 1 2 3 30 30 H 1.09000 * 109.47149 * 180.02562 * 1 2 3 31 31 H 0.97002 * 119.99716 * 0.02562 * 9 7 6 32 32 H 1.09004 * 109.46724 * 180.02562 * 12 10 9 33 33 H 1.09001 * 109.47194 * 299.99493 * 12 10 9 34 34 H 1.09000 * 109.46870 * 299.99783 * 13 12 10 35 35 H 1.09004 * 109.47108 * 179.97438 * 13 12 10 36 36 H 1.09001 * 109.47552 * 54.99254 * 16 14 13 37 37 H 1.08998 * 109.47651 * 175.00158 * 16 14 13 38 38 H 0.96699 * 114.00071 * 179.97438 * 17 16 14 39 39 H 1.09004 * 109.46943 * 299.99499 * 18 14 13 40 40 H 1.09001 * 109.46630 * 179.97438 * 18 14 13 41 41 H 1.08996 * 109.47452 * 179.97438 * 19 18 14 42 42 H 1.09000 * 109.47054 * 59.99785 * 19 18 14 43 43 H 1.08008 * 126.95544 * 179.75572 * 20 6 5 44 44 H 1.09007 * 109.47382 * 44.99934 * 23 22 21 45 45 H 0.96703 * 114.00330 * 179.97438 * 24 23 22 46 46 H 1.48504 * 109.99754 * 298.68356 * 25 23 22 47 47 H 1.48497 * 110.00093 * 59.99994 * 25 23 22 48 48 H 1.07999 * 119.75198 * 179.97438 * 26 22 21 49 49 H 1.07998 * 119.65706 * 0.04660 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3573 0.0022 6 6 5.6316 0.9386 0.0026 7 6 6.9131 0.2185 0.0048 8 8 7.9595 0.8389 0.0054 9 7 6.9287 -1.1293 0.0061 10 6 8.2058 -1.8470 0.0077 11 1 8.9354 -1.2918 -0.5817 12 6 8.7108 -1.9860 1.4453 13 6 7.6866 -2.7654 2.2726 14 6 7.4912 -4.1555 1.6642 15 1 8.4414 -4.6895 1.6654 16 6 6.4665 -4.9347 2.4911 17 8 6.9883 -5.1655 3.8013 18 6 6.9861 -4.0165 0.2266 19 6 8.0102 -3.2371 -0.6007 20 6 5.4944 2.2898 0.0065 21 6 4.0554 2.5510 0.0000 22 6 3.2765 3.7117 -0.0006 23 6 3.9381 5.0656 -0.0017 24 8 4.4609 5.3415 1.2992 25 14 2.6862 6.3682 -0.4568 26 6 1.9136 3.6151 -0.0011 27 6 1.2957 2.3726 0.0005 28 1 -0.3634 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 6.0942 -1.6239 0.0052 32 1 9.6613 -2.5196 1.4465 33 1 8.8501 -0.9956 1.8788 34 1 6.7365 -2.2313 2.2713 35 1 8.0467 -2.8647 3.2967 36 1 5.5442 -4.3583 2.5637 37 1 6.2610 -5.8901 2.0085 38 1 6.3903 -5.6554 4.3822 39 1 6.0358 -3.4825 0.2254 40 1 6.8472 -5.0069 -0.2070 41 1 7.6506 -3.1385 -1.6250 42 1 8.9604 -3.7712 -0.5995 43 1 6.2874 3.0230 0.0115 44 1 4.7503 5.0726 -0.7287 45 1 4.9023 6.1989 1.3721 46 1 2.1582 6.1106 -1.8207 47 1 1.5736 6.3690 0.5267 48 1 1.3127 4.5125 -0.0011 49 1 0.2174 2.3119 0.0017 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:35:10 Heat of formation + Delta-G solvation = -124.420116 kcal Electronic energy + Delta-G solvation = -33369.897097 eV Core-core repulsion = 28844.272930 eV Total energy + Delta-G solvation = -4525.624168 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.165 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -43.88407 -41.48597 -40.72835 -39.56387 -39.05960 -37.54441 -37.13214 -35.00417 -33.78070 -32.31862 -31.91726 -31.78721 -30.84015 -28.65499 -26.70425 -26.25813 -25.09829 -24.17239 -23.72976 -22.36409 -22.09251 -21.79960 -20.33554 -19.98888 -19.03149 -18.62365 -18.44801 -18.23858 -17.84634 -17.22291 -17.10892 -16.78557 -16.53460 -16.40651 -16.11720 -15.90813 -15.47855 -15.47242 -15.04116 -14.83533 -14.74374 -14.63235 -14.34301 -14.18265 -14.01967 -13.98191 -13.56151 -13.46336 -13.28894 -13.21578 -13.07810 -12.61184 -12.50596 -12.45378 -12.19459 -12.15175 -11.93660 -11.71954 -11.56770 -11.39238 -11.16464 -11.13222 -10.85886 -10.34464 -10.30870 -9.97561 -9.15680 -4.92982 -0.79297 -0.09637 0.50013 1.06312 1.27955 1.66532 1.81594 1.85245 1.94027 1.99828 2.20838 3.05692 3.25983 3.30053 3.40690 3.60568 3.61623 3.66234 3.68577 3.81876 3.87269 3.95145 3.99585 4.02306 4.17561 4.22386 4.29597 4.30900 4.31924 4.35460 4.37707 4.42956 4.45581 4.60634 4.64120 4.66762 4.69137 4.69522 4.70681 4.88045 4.94710 4.97962 5.04135 5.05772 5.10775 5.12510 5.17556 5.29656 5.34404 5.41645 5.46582 6.06721 6.20542 6.77172 6.85352 6.88798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.328 6.328 3 C 0.141 3.859 4 C 0.023 3.977 5 O -0.178 6.178 6 C -0.032 4.032 7 C 0.603 3.397 8 O -0.541 6.541 9 N -0.696 5.696 10 C 0.143 3.857 11 H 0.085 0.915 12 C -0.129 4.129 13 C -0.105 4.105 14 C -0.086 4.086 15 H 0.077 0.923 16 C 0.076 3.924 17 O -0.595 6.595 18 C -0.113 4.113 19 C -0.119 4.119 20 C -0.108 4.108 21 C -0.097 4.097 22 C -0.069 4.069 23 C -0.087 4.087 24 O -0.563 6.563 25 Si 0.784 3.216 26 C -0.106 4.106 27 C -0.170 4.170 28 H 0.072 0.928 29 H 0.073 0.927 30 H 0.122 0.878 31 H 0.413 0.587 32 H 0.086 0.914 33 H 0.048 0.952 34 H 0.051 0.949 35 H 0.055 0.945 36 H 0.047 0.953 37 H 0.059 0.941 38 H 0.395 0.605 39 H 0.064 0.936 40 H 0.086 0.914 41 H 0.083 0.917 42 H 0.096 0.904 43 H 0.181 0.819 44 H 0.085 0.915 45 H 0.403 0.597 46 H -0.285 1.285 47 H -0.280 1.280 48 H 0.145 0.855 49 H 0.177 0.823 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.919 -0.069 -2.211 5.393 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.242 6.242 3 C 0.095 3.905 4 C -0.025 4.025 5 O -0.080 6.080 6 C -0.082 4.082 7 C 0.388 3.612 8 O -0.420 6.420 9 N -0.347 5.347 10 C 0.040 3.960 11 H 0.104 0.896 12 C -0.167 4.167 13 C -0.142 4.142 14 C -0.104 4.104 15 H 0.095 0.905 16 C -0.002 4.002 17 O -0.404 6.404 18 C -0.150 4.150 19 C -0.157 4.157 20 C -0.128 4.128 21 C -0.098 4.098 22 C -0.070 4.070 23 C -0.195 4.195 24 O -0.373 6.373 25 Si 0.688 3.312 26 C -0.124 4.124 27 C -0.189 4.189 28 H 0.090 0.910 29 H 0.092 0.908 30 H 0.140 0.860 31 H 0.251 0.749 32 H 0.105 0.895 33 H 0.067 0.933 34 H 0.070 0.930 35 H 0.074 0.926 36 H 0.065 0.935 37 H 0.077 0.923 38 H 0.244 0.756 39 H 0.082 0.918 40 H 0.105 0.895 41 H 0.101 0.899 42 H 0.115 0.885 43 H 0.198 0.802 44 H 0.103 0.897 45 H 0.254 0.746 46 H -0.212 1.212 47 H -0.208 1.208 48 H 0.162 0.838 49 H 0.195 0.805 Dipole moment (debyes) X Y Z Total from point charges -4.682 -0.280 -2.561 5.344 hybrid contribution -0.850 -0.873 0.452 1.300 sum -5.533 -1.153 -2.110 6.032 Atomic orbital electron populations 1.23508 0.75285 1.06295 1.02973 1.86144 1.24326 1.25329 1.88367 1.17857 0.86214 0.86654 0.99816 1.19160 0.88213 0.87210 1.07904 1.84012 1.12724 1.34842 1.76417 1.22090 0.84025 0.92841 1.09277 1.16632 0.84816 0.82906 0.76852 1.90884 1.31098 1.68190 1.51830 1.46036 1.11411 1.04717 1.72535 1.21182 0.84324 0.93533 0.96966 0.89645 1.21907 0.99746 1.00223 0.94828 1.21415 0.98758 0.95164 0.98885 1.21167 0.99468 0.95334 0.94460 0.90494 1.22312 0.95776 0.98960 0.83150 1.86436 1.48897 1.79915 1.25125 1.21531 0.98467 1.01659 0.93380 1.21804 1.01681 0.92719 0.99506 1.22868 0.94845 0.94580 1.00522 1.19606 0.92950 0.92471 1.04770 1.18885 0.92821 0.93347 1.01919 1.24986 1.06423 0.98811 0.89324 1.86469 1.78316 1.43865 1.28644 0.94011 0.76523 0.84530 0.76166 1.20686 0.93477 0.98294 0.99906 1.21272 1.01772 0.89608 1.06236 0.90987 0.90801 0.85992 0.74948 0.89526 0.93273 0.93009 0.92616 0.93520 0.92260 0.75583 0.91754 0.89502 0.89884 0.88549 0.80169 0.89677 0.74551 1.21176 1.20754 0.83827 0.80536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.33 -1.63 10.50 -93.12 -0.98 -2.61 16 3 C 0.14 0.98 6.70 22.57 0.15 1.14 16 4 C 0.02 0.25 7.35 23.14 0.17 0.42 16 5 O -0.18 -1.84 10.28 -13.39 -0.14 -1.97 16 6 C -0.03 -0.32 7.07 24.00 0.17 -0.15 16 7 C 0.60 5.61 7.76 86.54 0.67 6.28 16 8 O -0.54 -7.93 16.49 -4.19 -0.07 -8.00 16 9 N -0.70 -2.38 4.23 -446.20 -1.89 -4.27 16 10 C 0.14 0.19 2.78 44.99 0.13 0.32 16 11 H 0.09 0.32 7.58 -2.39 -0.02 0.30 16 12 C -0.13 -0.37 5.60 30.59 0.17 -0.20 16 13 C -0.10 -0.30 4.94 30.59 0.15 -0.15 16 14 C -0.09 0.06 2.43 -10.79 -0.03 0.03 16 15 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 16 C 0.08 -0.06 6.43 71.98 0.46 0.40 16 17 O -0.60 -1.38 13.19 -148.98 -1.97 -3.35 16 18 C -0.11 0.48 5.03 30.60 0.15 0.63 16 19 C -0.12 0.46 5.61 30.59 0.17 0.64 16 20 C -0.11 -1.03 10.68 23.79 0.25 -0.77 16 21 C -0.10 -0.96 6.16 -20.24 -0.12 -1.09 16 22 C -0.07 -0.48 5.30 -19.87 -0.11 -0.59 16 23 C -0.09 -0.10 2.70 71.23 0.19 0.09 16 24 O -0.56 -0.94 12.86 -148.98 -1.92 -2.86 16 25 Si 0.78 -2.32 30.20 68.60 2.07 -0.25 16 26 C -0.11 -0.50 8.62 22.02 0.19 -0.31 16 27 C -0.17 -0.49 9.03 22.40 0.20 -0.29 16 28 H 0.07 -0.49 7.66 -2.39 -0.02 -0.51 16 29 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 30 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 31 H 0.41 0.30 6.58 -92.71 -0.61 -0.31 16 32 H 0.09 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.05 0.37 8.14 -2.39 -0.02 0.35 16 34 H 0.05 0.22 7.60 -2.39 -0.02 0.20 16 35 H 0.06 0.35 7.82 -2.38 -0.02 0.33 16 36 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.39 -2.27 9.12 -74.06 -0.68 -2.95 16 39 H 0.06 -0.27 6.51 -2.39 -0.02 -0.29 16 40 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 41 H 0.08 -0.40 8.14 -2.39 -0.02 -0.42 16 42 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 43 H 0.18 1.27 8.06 -2.91 -0.02 1.24 16 44 H 0.09 -0.13 7.96 -2.38 -0.02 -0.15 16 45 H 0.40 -3.68 8.74 -74.06 -0.65 -4.32 16 46 H -0.28 -0.63 7.11 99.48 0.71 0.07 16 47 H -0.28 -0.60 6.75 99.48 0.67 0.07 16 48 H 0.14 0.26 4.85 -2.91 -0.01 0.24 16 49 H 0.18 -0.74 6.26 -2.91 -0.02 -0.76 16 Total: 0.00 -23.95 395.28 -1.70 -25.65 By element: Atomic # 1 Polarization: -8.88 SS G_CDS: -0.91 Total: -9.79 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 4.09 Total: 7.44 kcal Atomic # 7 Polarization: -2.38 SS G_CDS: -1.89 Total: -4.27 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: -5.07 Total: -18.79 kcal Atomic # 14 Polarization: -2.32 SS G_CDS: 2.07 Total: -0.25 kcal Total: -23.95 -1.70 -25.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.770 kcal (2) G-P(sol) polarization free energy of solvation -23.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.721 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.650 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds