Wall clock time and date at job start Mon Mar 8 2021 02:35:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36772 * 125.80198 * 2 1 4 4 C 1.47256 * 126.94170 * 359.97438 * 3 2 1 5 5 O 1.21631 * 120.00145 * 359.70632 * 4 3 2 6 6 N 1.34773 * 120.00169 * 179.71346 * 4 3 2 7 7 C 1.46506 * 120.00361 * 179.97438 * 6 4 3 8 8 H 1.08996 * 109.46660 * 325.00382 * 7 6 4 9 9 C 1.52999 * 109.46684 * 84.99594 * 7 6 4 10 10 C 1.53005 * 109.47159 * 60.00602 * 9 7 6 11 11 C 1.52997 * 109.47452 * 59.99536 * 10 9 7 12 12 H 1.09002 * 109.46695 * 59.99734 * 11 10 9 13 13 C 1.52997 * 109.47232 * 179.97438 * 11 10 9 14 14 O 1.42892 * 109.47178 * 295.00054 * 13 11 10 15 15 C 1.53002 * 109.46817 * 300.00239 * 11 10 9 16 16 C 1.52997 * 109.47289 * 204.99667 * 7 6 4 17 17 C 1.46688 * 106.11384 * 179.71310 * 3 2 1 18 18 C 1.34490 * 106.33427 * 0.26277 * 17 3 2 19 19 C 1.50694 * 125.57061 * 179.97438 * 18 17 3 20 20 O 1.42907 * 109.46955 * 299.99768 * 19 18 17 21 21 Si 1.86302 * 109.47018 * 179.97438 * 19 18 17 22 22 N 1.34659 * 125.80170 * 180.16210 * 2 1 3 23 23 H 1.09002 * 109.47309 * 89.99992 * 1 2 3 24 24 H 1.09005 * 109.47381 * 209.99951 * 1 2 3 25 25 H 1.09000 * 109.47393 * 330.00142 * 1 2 3 26 26 H 0.97004 * 120.00228 * 359.97438 * 6 4 3 27 27 H 1.09000 * 109.47486 * 300.00065 * 9 7 6 28 28 H 1.09002 * 109.46716 * 180.02562 * 9 7 6 29 29 H 1.09002 * 109.46935 * 299.99411 * 10 9 7 30 30 H 1.09001 * 109.46812 * 179.97438 * 10 9 7 31 31 H 1.09000 * 109.46818 * 55.00071 * 13 11 10 32 32 H 1.09001 * 109.47096 * 174.99967 * 13 11 10 33 33 H 0.96703 * 114.00148 * 179.97438 * 14 13 11 34 34 H 1.08992 * 109.47063 * 299.99823 * 15 11 10 35 35 H 1.09004 * 109.46733 * 179.97438 * 15 11 10 36 36 H 1.09002 * 109.47153 * 179.97438 * 16 7 6 37 37 H 1.09001 * 109.46832 * 60.00146 * 16 7 6 38 38 H 1.08000 * 126.83410 * 180.22321 * 17 3 2 39 39 H 1.08996 * 109.47578 * 59.99842 * 19 18 17 40 40 H 0.96707 * 113.99655 * 180.02562 * 20 19 18 41 41 H 1.48504 * 109.99933 * 59.99874 * 21 19 18 42 42 H 1.48504 * 109.99971 * 181.31769 * 21 19 18 43 43 H 0.96997 * 124.85061 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8703 2.5156 -0.0005 5 8 0.6839 2.7839 -0.0064 6 7 2.7849 3.5053 0.0054 7 6 2.3504 4.9045 0.0043 8 1 1.4419 5.0022 -0.5900 9 6 2.0711 5.3528 1.4402 10 6 3.3463 5.2155 2.2745 11 6 4.4469 6.0909 1.6718 12 1 4.1235 7.1319 1.6710 13 6 5.7218 5.9541 2.5064 14 8 5.4935 6.4813 3.8148 15 6 4.7261 5.6425 0.2358 16 6 3.4509 5.7799 -0.5984 17 6 3.6882 0.6151 0.0071 18 6 3.6095 -0.7275 0.0048 19 6 4.7819 -1.6743 0.0095 20 8 5.5817 -1.4478 -1.1530 21 14 4.1614 -3.4310 0.0046 22 7 2.2947 -1.0921 -0.0031 23 1 -0.3634 0.0000 -1.0277 24 1 -0.3634 -0.8900 0.5138 25 1 -0.3634 0.8900 0.5138 26 1 3.7311 3.2914 0.0104 27 1 1.2871 4.7291 1.8697 28 1 1.7474 6.3936 1.4394 29 1 3.6697 4.1746 2.2753 30 1 3.1475 5.5353 3.2974 31 1 5.9958 4.9018 2.5814 32 1 6.5304 6.5069 2.0280 33 1 6.2612 6.4271 4.4002 34 1 5.0494 4.6016 0.2367 35 1 5.5099 6.2665 -0.1937 36 1 3.1274 6.8208 -0.5996 37 1 3.6498 5.4604 -1.6214 38 1 4.5890 1.2108 0.0123 39 1 5.3828 -1.5041 0.9027 40 1 6.3558 -2.0240 -1.2161 41 1 3.3403 -3.6762 -1.2082 42 1 5.3076 -4.3745 0.0412 43 1 1.9734 -2.0073 -0.0060 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207534_9865296.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 02:35:30 Heat of formation + Delta-G solvation = -88.864802 kcal Electronic energy + Delta-G solvation = -24675.602469 eV Core-core repulsion = 21108.136990 eV Total energy + Delta-G solvation = -3567.465479 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.48040 -40.98277 -39.22326 -37.87806 -37.39132 -34.73119 -32.89246 -32.53507 -31.77287 -31.03867 -28.97728 -26.53236 -25.45537 -23.73252 -23.50876 -22.05803 -21.44850 -20.83373 -20.07290 -18.70242 -18.19350 -18.15681 -17.32826 -16.78584 -16.46833 -16.24693 -15.86419 -15.71872 -15.40850 -15.11828 -14.82175 -14.62483 -14.57998 -14.47797 -14.07341 -13.88869 -13.71422 -13.43096 -13.40264 -13.14863 -12.96174 -12.92688 -12.54281 -12.39905 -12.13593 -12.10814 -11.52961 -11.27835 -11.07516 -10.91113 -10.78363 -10.56058 -10.09397 -9.78666 -9.14104 -5.08255 0.70670 1.08623 1.28358 1.45932 1.80105 2.01937 2.43941 2.55339 3.32890 3.40631 3.68700 3.70179 3.76320 3.89038 3.93487 4.06973 4.13298 4.22717 4.32169 4.43296 4.44641 4.46647 4.50745 4.53196 4.54914 4.69470 4.70871 4.74628 4.77773 4.79796 5.01705 5.03380 5.10969 5.13234 5.17397 5.23167 5.29580 5.42942 5.47569 5.64197 5.69959 5.86520 6.39559 6.57249 6.68854 6.92051 7.38518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.117 3.883 3 C -0.266 4.266 4 C 0.587 3.413 5 O -0.586 6.586 6 N -0.708 5.708 7 C 0.148 3.852 8 H 0.069 0.931 9 C -0.126 4.126 10 C -0.099 4.099 11 C -0.086 4.086 12 H 0.069 0.931 13 C 0.077 3.923 14 O -0.596 6.596 15 C -0.109 4.109 16 C -0.120 4.120 17 C -0.138 4.138 18 C 0.014 3.986 19 C -0.050 4.050 20 O -0.553 6.553 21 Si 0.749 3.251 22 N -0.536 5.536 23 H 0.080 0.920 24 H 0.094 0.906 25 H 0.083 0.917 26 H 0.407 0.593 27 H 0.044 0.956 28 H 0.075 0.925 29 H 0.059 0.941 30 H 0.052 0.948 31 H 0.053 0.947 32 H 0.057 0.943 33 H 0.395 0.605 34 H 0.070 0.930 35 H 0.083 0.917 36 H 0.086 0.914 37 H 0.078 0.922 38 H 0.157 0.843 39 H 0.112 0.888 40 H 0.399 0.601 41 H -0.293 1.293 42 H -0.274 1.274 43 H 0.425 0.575 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.564 -3.781 1.953 7.005 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.003 4.003 3 C -0.275 4.275 4 C 0.377 3.623 5 O -0.469 6.469 6 N -0.359 5.359 7 C 0.044 3.956 8 H 0.087 0.913 9 C -0.165 4.165 10 C -0.137 4.137 11 C -0.105 4.105 12 H 0.088 0.912 13 C -0.001 4.001 14 O -0.405 6.405 15 C -0.147 4.147 16 C -0.158 4.158 17 C -0.162 4.162 18 C -0.095 4.095 19 C -0.160 4.160 20 O -0.364 6.364 21 Si 0.652 3.348 22 N -0.136 5.136 23 H 0.098 0.902 24 H 0.113 0.887 25 H 0.101 0.899 26 H 0.244 0.756 27 H 0.063 0.937 28 H 0.093 0.907 29 H 0.077 0.923 30 H 0.071 0.929 31 H 0.071 0.929 32 H 0.075 0.925 33 H 0.244 0.756 34 H 0.089 0.911 35 H 0.102 0.898 36 H 0.105 0.895 37 H 0.096 0.904 38 H 0.174 0.826 39 H 0.129 0.871 40 H 0.251 0.749 41 H -0.221 1.221 42 H -0.200 1.200 43 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges 3.721 -3.930 1.170 5.538 hybrid contribution 1.770 -0.406 -0.450 1.871 sum 5.492 -4.336 0.721 7.034 Atomic orbital electron populations 1.20611 0.85935 1.04853 1.03871 1.20568 0.94344 0.85487 0.99872 1.20236 0.94130 0.91906 1.21264 1.17591 0.85092 0.84918 0.74694 1.90717 1.18070 1.84973 1.53118 1.45788 1.09861 1.05358 1.74937 1.20901 0.98205 0.80310 0.96228 0.91311 1.21866 0.97779 1.01445 0.95399 1.21370 0.94367 0.99549 0.98420 1.21158 0.94523 1.00221 0.94560 0.91208 1.22302 0.96911 0.97814 0.83038 1.86442 1.43444 1.85507 1.25074 1.21493 0.97709 1.02254 0.93202 1.21776 0.94232 1.00324 0.99451 1.21922 0.95401 0.93142 1.05747 1.19463 0.83953 0.94633 1.11418 1.24233 0.92325 1.07893 0.91507 1.86560 1.42405 1.63436 1.43962 0.94697 0.82810 0.71959 0.85316 1.41634 1.05136 1.08813 1.58051 0.90159 0.88732 0.89854 0.75563 0.93675 0.90680 0.92261 0.92920 0.92881 0.92475 0.75592 0.91125 0.89850 0.89515 0.90369 0.82589 0.87057 0.74937 1.22063 1.19951 0.73351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.20 9.88 71.24 0.70 0.51 16 2 C 0.12 0.51 7.17 41.78 0.30 0.81 16 3 C -0.27 -1.87 6.29 -19.04 -0.12 -1.99 16 4 C 0.59 5.79 7.77 86.61 0.67 6.46 16 5 O -0.59 -9.54 14.48 -4.13 -0.06 -9.60 16 6 N -0.71 -2.71 4.23 -445.96 -1.89 -4.59 16 7 C 0.15 0.50 2.78 44.99 0.13 0.62 16 8 H 0.07 0.52 7.58 -2.39 -0.02 0.51 16 9 C -0.13 -0.57 5.60 30.60 0.17 -0.40 16 10 C -0.10 -0.28 4.94 30.60 0.15 -0.13 16 11 C -0.09 0.05 2.43 -10.79 -0.03 0.03 16 12 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 13 C 0.08 -0.14 6.43 71.98 0.46 0.32 16 14 O -0.60 -0.94 13.19 -148.98 -1.97 -2.90 16 15 C -0.11 0.45 5.03 30.60 0.15 0.60 16 16 C -0.12 0.25 5.61 30.59 0.17 0.42 16 17 C -0.14 -0.44 10.43 23.62 0.25 -0.19 16 18 C 0.01 0.01 6.14 40.98 0.25 0.26 16 19 C -0.05 0.20 2.97 71.23 0.21 0.41 16 20 O -0.55 0.64 12.84 -148.98 -1.91 -1.27 16 21 Si 0.75 -4.28 30.94 68.60 2.12 -2.16 16 22 N -0.54 0.07 5.41 -171.07 -0.93 -0.86 16 23 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 24 H 0.09 -0.38 8.14 -2.38 -0.02 -0.39 16 25 H 0.08 0.58 6.47 -2.39 -0.02 0.57 16 26 H 0.41 -0.18 5.99 -92.71 -0.56 -0.74 16 27 H 0.04 0.43 8.14 -2.39 -0.02 0.41 16 28 H 0.07 0.26 8.14 -2.39 -0.02 0.24 16 29 H 0.06 0.18 7.60 -2.39 -0.02 0.16 16 30 H 0.05 0.33 7.82 -2.39 -0.02 0.31 16 31 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 33 H 0.39 -2.65 9.12 -74.05 -0.68 -3.33 16 34 H 0.07 -0.39 6.50 -2.39 -0.02 -0.40 16 35 H 0.08 -0.51 8.14 -2.39 -0.02 -0.52 16 36 H 0.09 -0.25 8.14 -2.39 -0.02 -0.27 16 37 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 38 H 0.16 -0.08 7.70 -2.91 -0.02 -0.11 16 39 H 0.11 -0.94 7.96 -2.39 -0.02 -0.96 16 40 H 0.40 -3.78 8.74 -74.05 -0.65 -4.43 16 41 H -0.29 -0.47 7.11 99.48 0.71 0.24 16 42 H -0.27 0.43 7.11 99.48 0.71 1.14 16 43 H 0.43 -2.43 6.70 -92.71 -0.62 -3.05 16 Total: 0.00 -22.21 342.40 -2.56 -24.77 By element: Atomic # 1 Polarization: -9.72 SS G_CDS: -1.41 Total: -11.12 kcal Atomic # 6 Polarization: 4.26 SS G_CDS: 3.48 Total: 7.74 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -2.81 Total: -5.45 kcal Atomic # 8 Polarization: -9.83 SS G_CDS: -3.94 Total: -13.77 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.12 Total: -2.16 kcal Total: -22.21 -2.56 -24.77 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207534_9865296.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.096 kcal (2) G-P(sol) polarization free energy of solvation -22.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.307 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds