Wall clock time and date at job start Sun Mar 7 2021 20:35:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35648 * 116.99683 * 2 1 4 4 C 1.40142 * 120.14361 * 179.97438 * 3 2 1 5 5 C 1.47533 * 120.19752 * 0.02562 * 4 3 2 6 6 O 1.21593 * 119.99375 * 359.97438 * 5 4 3 7 7 N 1.34771 * 120.00441 * 179.97438 * 5 4 3 8 8 C 1.46496 * 119.99842 * 179.97438 * 7 5 4 9 9 H 1.08996 * 109.47437 * 324.99968 * 8 7 5 10 10 C 1.52998 * 109.47280 * 85.00270 * 8 7 5 11 11 C 1.53001 * 109.47396 * 179.97438 * 10 8 7 12 12 C 1.53002 * 109.47051 * 299.99893 * 11 10 8 13 13 H 1.09005 * 109.46940 * 299.99730 * 12 11 10 14 14 C 1.53001 * 109.47051 * 179.97438 * 12 11 10 15 15 O 1.42898 * 109.47154 * 64.99701 * 14 12 11 16 16 C 1.52998 * 109.46934 * 59.99824 * 12 11 10 17 17 C 1.53002 * 109.46817 * 204.99584 * 8 7 5 18 18 C 1.39713 * 119.61512 * 179.97438 * 4 3 2 19 19 C 1.37793 * 119.90706 * 0.02562 * 18 4 3 20 20 C 1.50695 * 119.85002 * 180.02562 * 19 18 4 21 21 O 1.42898 * 109.46955 * 299.99893 * 20 19 18 22 22 Si 1.86300 * 109.47389 * 179.97438 * 20 19 18 23 23 C 1.38550 * 120.30134 * 0.27292 * 19 18 4 24 24 C 1.38055 * 120.38447 * 359.44924 * 23 19 18 25 25 H 1.08996 * 109.47476 * 300.00267 * 1 2 3 26 26 H 1.09003 * 109.46789 * 60.00165 * 1 2 3 27 27 H 1.08999 * 109.47550 * 179.97438 * 1 2 3 28 28 H 0.97002 * 119.99859 * 359.97438 * 7 5 4 29 29 H 1.09003 * 109.46820 * 299.99981 * 10 8 7 30 30 H 1.09005 * 109.47384 * 59.99486 * 10 8 7 31 31 H 1.09006 * 109.46983 * 179.97438 * 11 10 8 32 32 H 1.08996 * 109.47133 * 59.99813 * 11 10 8 33 33 H 1.08996 * 109.47067 * 184.99880 * 14 12 11 34 34 H 1.09004 * 109.47031 * 304.99956 * 14 12 11 35 35 H 0.96703 * 114.00301 * 179.97438 * 15 14 12 36 36 H 1.09003 * 109.46400 * 180.02562 * 16 12 11 37 37 H 1.08996 * 109.47132 * 60.00152 * 16 12 11 38 38 H 1.08996 * 109.47431 * 300.00388 * 17 8 7 39 39 H 1.09006 * 109.47105 * 60.00508 * 17 8 7 40 40 H 1.07996 * 120.04908 * 179.97438 * 18 4 3 41 41 H 1.09001 * 109.47545 * 59.99436 * 20 19 18 42 42 H 0.96700 * 113.99995 * 299.99800 * 21 20 19 43 43 H 1.48498 * 109.99998 * 179.97438 * 22 20 19 44 44 H 1.48498 * 109.99919 * 301.31690 * 22 20 19 45 45 H 1.07991 * 119.80571 * 179.72823 * 23 19 18 46 46 H 1.08004 * 119.95432 * 180.27189 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2550 0.0531 0.0005 6 8 3.7094 -1.0335 0.0005 7 7 5.6005 0.1317 0.0005 8 6 6.4056 -1.0922 0.0011 9 1 5.9020 -1.8582 0.5909 10 6 6.5809 -1.5880 -1.4356 11 6 7.4223 -2.8659 -1.4351 12 6 8.7948 -2.5726 -0.8258 13 1 9.2980 -1.8065 -1.4157 14 6 9.6360 -3.8506 -0.8247 15 8 9.8978 -4.2497 -2.1716 16 6 8.6194 -2.0768 0.6110 17 6 7.7781 -0.7994 0.6106 18 6 4.0668 2.5363 0.0000 19 6 3.3038 3.6837 -0.0005 20 6 3.9768 5.0320 -0.0017 21 8 4.7926 5.1581 1.1647 22 14 2.6826 6.3721 -0.0030 23 6 1.9206 3.6034 0.0052 24 6 1.2925 2.3740 0.0000 25 1 -0.3634 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 6.0357 0.9986 0.0002 29 1 5.6031 -1.7966 -1.8699 30 1 7.0845 -0.8221 -2.0255 31 1 7.5469 -3.2194 -2.4588 32 1 6.9191 -3.6320 -0.8453 33 1 10.5791 -3.6644 -0.3111 34 1 9.0923 -4.6430 -0.3101 35 1 10.4281 -5.0548 -2.2473 36 1 9.5972 -1.8675 1.0449 37 1 8.1162 -2.8429 1.2008 38 1 8.2816 -0.0335 0.0208 39 1 7.6532 -0.4462 1.6342 40 1 5.1446 2.6037 0.0008 41 1 4.5986 5.1270 -0.8919 42 1 4.3044 5.0836 1.9961 43 1 3.3336 7.7068 -0.0035 44 1 1.8081 6.2325 -1.1950 45 1 1.3304 4.5077 0.0091 46 1 0.2138 2.3195 0.0000 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7207542_12496546.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 20:35:52 Heat of formation + Delta-G solvation = -135.230410 kcal Electronic energy + Delta-G solvation = -27761.400966 eV Core-core repulsion = 23810.442502 eV Total energy + Delta-G solvation = -3950.958464 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.75010 -40.57410 -39.26475 -39.16761 -37.37520 -37.14256 -35.07470 -32.91749 -31.87972 -31.75494 -30.92011 -28.59116 -26.44651 -26.21053 -24.84727 -23.74379 -22.84151 -21.92402 -21.31410 -20.77450 -19.48062 -18.43064 -18.22667 -17.96968 -17.40611 -16.83654 -16.70686 -16.32388 -16.15558 -15.92038 -15.88328 -15.72850 -15.51469 -14.96122 -14.82409 -14.59577 -14.55502 -14.33876 -13.90602 -13.67777 -13.60440 -13.31367 -13.17901 -13.10500 -12.95011 -12.44282 -12.18095 -12.14305 -12.10913 -12.09398 -11.81977 -11.56934 -11.39444 -11.22546 -10.85138 -10.74636 -10.41352 -10.21517 -9.87908 -9.26270 -5.11629 -0.23376 0.20109 1.21718 1.55023 1.89400 1.92704 2.20101 2.23806 2.76492 3.21757 3.36130 3.50202 3.59875 3.64291 3.68633 3.81462 3.93701 3.99355 4.02720 4.10343 4.20441 4.20561 4.28828 4.35272 4.37191 4.47228 4.47879 4.49951 4.56650 4.57693 4.60617 4.64807 4.67965 4.83115 4.89123 4.96597 5.04260 5.08127 5.13706 5.19104 5.24234 5.33202 5.43721 5.49373 5.50759 5.64464 6.30215 6.49640 6.63197 6.70608 7.41408 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.192 3.808 4 C -0.174 4.174 5 C 0.562 3.438 6 O -0.515 6.515 7 N -0.728 5.728 8 C 0.147 3.853 9 H 0.090 0.910 10 C -0.129 4.129 11 C -0.107 4.107 12 C -0.090 4.090 13 H 0.078 0.922 14 C 0.079 3.921 15 O -0.573 6.573 16 C -0.109 4.109 17 C -0.125 4.125 18 C -0.020 4.020 19 C -0.169 4.169 20 C -0.062 4.062 21 O -0.541 6.541 22 Si 0.686 3.314 23 C -0.048 4.048 24 C -0.214 4.214 25 H 0.059 0.941 26 H 0.058 0.942 27 H 0.105 0.895 28 H 0.397 0.603 29 H 0.069 0.931 30 H 0.063 0.937 31 H 0.073 0.927 32 H 0.063 0.937 33 H 0.045 0.955 34 H 0.046 0.954 35 H 0.380 0.620 36 H 0.070 0.930 37 H 0.069 0.931 38 H 0.069 0.931 39 H 0.072 0.928 40 H 0.135 0.865 41 H 0.114 0.886 42 H 0.380 0.620 43 H -0.254 1.254 44 H -0.258 1.258 45 H 0.133 0.867 46 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.774 1.986 3.037 3.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.143 3.857 4 C -0.178 4.178 5 C 0.349 3.651 6 O -0.391 6.391 7 N -0.380 5.380 8 C 0.043 3.957 9 H 0.108 0.892 10 C -0.168 4.168 11 C -0.145 4.145 12 C -0.108 4.108 13 H 0.097 0.903 14 C 0.001 3.999 15 O -0.379 6.379 16 C -0.147 4.147 17 C -0.163 4.163 18 C -0.039 4.039 19 C -0.170 4.170 20 C -0.173 4.173 21 O -0.346 6.346 22 Si 0.588 3.412 23 C -0.066 4.066 24 C -0.233 4.233 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.123 0.877 28 H 0.232 0.768 29 H 0.087 0.913 30 H 0.082 0.918 31 H 0.092 0.908 32 H 0.082 0.918 33 H 0.064 0.936 34 H 0.064 0.936 35 H 0.227 0.773 36 H 0.089 0.911 37 H 0.087 0.913 38 H 0.088 0.912 39 H 0.091 0.909 40 H 0.153 0.847 41 H 0.132 0.868 42 H 0.227 0.773 43 H -0.178 1.178 44 H -0.183 1.183 45 H 0.151 0.849 46 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges -1.330 2.274 2.043 3.334 hybrid contribution 0.620 -0.266 -0.235 0.714 sum -0.711 2.008 1.808 2.794 Atomic orbital electron populations 1.23233 0.78227 1.04745 1.01426 1.86386 1.21161 1.25188 1.86182 1.19096 0.90963 0.85050 0.90558 1.19372 0.90906 0.93970 1.13538 1.17942 0.81921 0.88626 0.76632 1.90843 1.71500 1.28563 1.48210 1.45990 1.05873 1.09752 1.76398 1.21002 0.90790 0.86907 0.96989 0.89238 1.21935 1.00740 0.97791 0.96336 1.21477 0.94013 0.97078 1.01945 1.21203 0.96200 0.96707 0.96710 0.90310 1.22232 0.98015 0.96307 0.83360 1.86475 1.76239 1.48278 1.26899 1.21448 1.00217 0.97121 0.95962 1.21772 0.94510 0.98462 1.01533 1.20968 0.99914 0.89841 0.93138 1.20122 0.93535 0.96026 1.07305 1.24959 1.01822 0.99239 0.91278 1.86498 1.37307 1.95376 1.15432 0.94789 0.80204 0.77633 0.88553 1.20986 0.93650 0.97313 0.94647 1.21230 1.00732 0.91579 1.09729 0.92259 0.92376 0.87681 0.76761 0.91257 0.91810 0.90841 0.91849 0.93642 0.93556 0.77310 0.91082 0.91273 0.91185 0.90890 0.84690 0.86817 0.77285 1.17840 1.18253 0.84928 0.84156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.05 8.57 -40.52 -0.35 -1.40 16 3 C 0.19 0.49 6.70 -38.70 -0.26 0.23 16 4 C -0.17 -0.43 5.89 -104.84 -0.62 -1.05 16 5 C 0.56 2.28 7.73 -12.47 -0.10 2.19 16 6 O -0.52 -4.03 14.82 -16.59 -0.25 -4.27 16 7 N -0.73 -0.78 5.03 -54.85 -0.28 -1.05 16 8 C 0.15 0.15 2.45 -67.93 -0.17 -0.01 16 9 H 0.09 0.26 7.58 -51.93 -0.39 -0.13 16 10 C -0.13 -0.21 5.49 -26.73 -0.15 -0.36 16 11 C -0.11 -0.14 5.10 -26.73 -0.14 -0.27 16 12 C -0.09 -0.01 2.43 -90.62 -0.22 -0.23 16 13 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 14 C 0.08 -0.01 6.43 37.16 0.24 0.22 16 15 O -0.57 -0.65 13.20 -35.23 -0.46 -1.12 16 16 C -0.11 0.13 5.20 -26.75 -0.14 -0.01 16 17 C -0.12 0.14 5.39 -26.75 -0.14 -0.01 16 18 C -0.02 0.00 9.09 -39.19 -0.36 -0.36 16 19 C -0.17 0.11 5.39 -104.67 -0.56 -0.45 16 20 C -0.06 0.08 2.81 36.00 0.10 0.18 16 21 O -0.54 0.57 12.76 -35.23 -0.45 0.12 16 22 Si 0.69 -1.33 29.77 -169.99 -5.06 -6.39 16 23 C -0.05 0.05 8.66 -39.53 -0.34 -0.29 16 24 C -0.21 0.03 9.03 -39.48 -0.36 -0.33 16 25 H 0.06 -0.14 7.66 -51.93 -0.40 -0.53 16 26 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 27 H 0.10 -0.16 8.14 -51.93 -0.42 -0.59 16 28 H 0.40 -0.53 6.63 -40.82 -0.27 -0.80 16 29 H 0.07 0.26 8.14 -51.93 -0.42 -0.16 16 30 H 0.06 0.08 8.14 -51.93 -0.42 -0.34 16 31 H 0.07 0.18 7.82 -51.93 -0.41 -0.22 16 32 H 0.06 0.10 8.14 -51.93 -0.42 -0.32 16 33 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 35 H 0.38 -1.12 9.12 45.56 0.42 -0.71 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 38 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 40 H 0.14 -0.22 6.40 -52.49 -0.34 -0.55 16 41 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 42 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 43 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 44 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 45 H 0.13 -0.43 4.85 -52.49 -0.25 -0.69 16 46 H 0.14 -0.33 6.30 -52.48 -0.33 -0.66 16 LS Contribution 366.20 15.07 5.52 5.52 Total: 0.00 -9.60 366.20 -9.78 -19.37 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -6.24 Total: -11.22 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -2.21 Total: 0.44 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.28 Total: -1.05 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -1.51 Total: -6.67 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.06 Total: -6.39 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.60 -9.78 -19.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_12496546.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.857 kcal (2) G-P(sol) polarization free energy of solvation -9.597 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.776 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.373 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds