Wall clock time and date at job start Sun Mar 7 2021 20:37:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38561 * 120.06113 * 0.02562 * 3 2 1 5 5 C 1.38278 * 120.01542 * 179.97438 * 4 3 2 6 6 C 1.50703 * 119.92089 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47055 * 300.00204 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 180.02562 * 6 5 4 9 9 C 1.38212 * 120.15793 * 0.27311 * 5 4 3 10 10 C 1.38379 * 120.12996 * 359.45044 * 9 5 4 11 11 Cl 1.73599 * 120.01233 * 180.27360 * 10 9 5 12 12 C 1.38624 * 119.97817 * 0.54936 * 10 9 5 13 13 O 1.36019 * 120.07878 * 179.74801 * 12 10 9 14 14 C 1.42907 * 116.99852 * 269.97585 * 13 12 10 15 15 C 1.52993 * 109.47394 * 269.99710 * 14 13 12 16 16 C 1.50704 * 109.46821 * 149.99853 * 14 13 12 17 17 O 1.21282 * 119.99924 * 5.00123 * 16 14 13 18 18 N 1.34777 * 119.99814 * 184.99822 * 16 14 13 19 19 C 1.46501 * 119.99720 * 179.97438 * 18 16 14 20 20 H 1.08991 * 109.47426 * 325.00029 * 19 18 16 21 21 C 1.52996 * 109.46708 * 85.00558 * 19 18 16 22 22 C 1.53009 * 109.47050 * 179.97438 * 21 19 18 23 23 C 1.53003 * 109.46935 * 300.00208 * 22 21 19 24 24 H 1.09002 * 109.47066 * 299.99733 * 23 22 21 25 25 C 1.53001 * 109.47078 * 180.02562 * 23 22 21 26 26 O 1.42895 * 109.47314 * 64.99450 * 25 23 22 27 27 C 1.52997 * 109.47458 * 59.99624 * 23 22 21 28 28 C 1.52997 * 109.47125 * 300.00258 * 27 23 22 29 29 H 1.08999 * 109.46554 * 300.00136 * 1 2 3 30 30 H 1.09003 * 109.46967 * 59.99174 * 1 2 3 31 31 H 1.08995 * 109.47543 * 179.97438 * 1 2 3 32 32 H 1.07997 * 119.99351 * 359.97438 * 4 3 2 33 33 H 1.09002 * 109.47152 * 60.00012 * 6 5 4 34 34 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 35 35 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 36 36 H 1.48509 * 109.99497 * 181.32041 * 8 6 5 37 37 H 1.07994 * 119.93806 * 179.72647 * 9 5 4 38 38 H 1.08993 * 109.47057 * 30.00166 * 14 13 12 39 39 H 1.09006 * 109.47593 * 300.00421 * 15 14 13 40 40 H 1.09003 * 109.47052 * 59.99761 * 15 14 13 41 41 H 1.08996 * 109.47376 * 180.02562 * 15 14 13 42 42 H 0.96999 * 120.00116 * 0.02562 * 18 16 14 43 43 H 1.08995 * 109.47557 * 299.99373 * 21 19 18 44 44 H 1.08993 * 109.47405 * 60.00073 * 21 19 18 45 45 H 1.08993 * 109.47137 * 180.02562 * 22 21 19 46 46 H 1.08999 * 109.47324 * 59.99534 * 22 21 19 47 47 H 1.09003 * 109.46916 * 184.99900 * 25 23 22 48 48 H 1.09004 * 109.46457 * 304.99618 * 25 23 22 49 49 H 0.96703 * 114.00223 * 180.02562 * 26 25 23 50 50 H 1.09004 * 109.47037 * 180.02562 * 27 23 22 51 51 H 1.09002 * 109.46893 * 60.00003 * 27 23 22 52 52 H 1.09002 * 109.47027 * 299.99663 * 28 27 23 53 53 H 1.09006 * 109.47112 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2932 2.3746 0.0005 5 6 1.9221 3.6061 0.0011 6 6 1.1007 4.8696 0.0011 7 8 0.2767 4.9020 -1.1660 8 14 2.2349 6.3475 0.0011 9 6 3.3022 3.6810 -0.0046 10 6 4.0606 2.5236 0.0006 11 17 5.7939 2.6212 0.0006 12 6 3.4360 1.2861 0.0000 13 8 4.1795 0.1471 0.0000 14 6 4.5342 -0.3961 -1.2734 15 6 3.4530 -1.3785 -1.7278 16 6 5.8531 -1.1167 -1.1623 17 8 6.3880 -1.2392 -0.0808 18 7 6.4381 -1.6251 -2.2650 19 6 7.7205 -2.3251 -2.1571 20 1 8.3270 -1.8552 -1.3830 21 6 7.4726 -3.7900 -1.7919 22 6 8.8119 -4.5214 -1.6798 23 6 9.5472 -4.4471 -3.0195 24 1 8.9404 -4.9168 -3.7936 25 6 10.8862 -5.1789 -2.9077 26 8 10.6512 -6.5702 -2.6820 27 6 9.7950 -2.9821 -3.3848 28 6 8.4558 -2.2509 -3.4968 29 1 -0.3632 0.5139 0.8900 30 1 -0.3633 0.5140 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 0.2147 2.3192 0.0005 33 1 0.4715 4.8939 0.8908 34 1 -0.2804 5.6896 -1.2323 35 1 3.0976 6.3257 -1.2074 36 1 1.4373 7.5998 0.0332 37 1 3.7896 4.6446 -0.0087 38 1 4.6211 0.4107 -2.0010 39 1 3.3660 -2.1854 -1.0001 40 1 2.4990 -0.8573 -1.8081 41 1 3.7237 -1.7931 -2.6988 42 1 6.0105 -1.5268 -3.1300 43 1 6.9485 -3.8430 -0.8377 44 1 6.8662 -4.2599 -2.5661 45 1 8.6353 -5.5651 -1.4201 46 1 9.4188 -4.0516 -0.9058 47 1 11.4487 -5.0507 -3.8325 48 1 11.4568 -4.7671 -2.0753 49 1 11.4579 -7.0972 -2.6004 50 1 10.3185 -2.9293 -4.3395 51 1 10.4019 -2.5124 -2.6107 52 1 7.8490 -2.7207 -4.2709 53 1 8.6324 -1.2073 -3.7575 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 20:37:20 Heat of formation + Delta-G solvation = -175.430209 kcal Electronic energy + Delta-G solvation = -36561.234539 eV Core-core repulsion = 31618.975658 eV Total energy + Delta-G solvation = -4942.258881 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.158 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.00331 -41.22148 -39.86938 -39.21277 -38.89232 -37.83944 -37.40549 -37.05455 -35.33721 -33.40724 -31.82849 -31.76347 -31.37426 -30.81520 -28.55838 -26.79413 -26.44380 -25.06260 -23.81989 -23.62404 -22.75828 -22.20831 -21.53455 -20.84758 -19.65399 -18.77550 -18.65945 -18.40032 -18.13442 -18.01826 -17.31574 -16.95199 -16.70079 -16.37947 -16.24724 -16.02449 -15.94373 -15.84354 -15.50455 -15.31978 -15.04511 -14.75858 -14.56603 -14.51657 -14.18056 -14.02011 -13.98080 -13.92420 -13.56568 -13.35640 -13.25817 -13.17938 -12.98478 -12.97016 -12.76328 -12.72075 -12.41521 -12.28141 -12.16956 -12.13337 -11.97702 -11.76690 -11.59199 -11.45311 -11.37369 -11.29149 -10.84513 -10.69359 -10.58442 -10.13527 -9.85371 -9.42085 -4.93808 -0.35129 -0.03461 0.83694 1.22626 1.47222 1.56612 1.62308 1.91367 2.14831 2.20713 2.68574 3.19027 3.29823 3.53700 3.58540 3.62624 3.72043 3.74996 3.79192 3.82177 3.95139 3.96631 4.00863 4.02220 4.07238 4.27112 4.28771 4.33796 4.35635 4.40645 4.41850 4.48328 4.51840 4.57148 4.59445 4.67774 4.68909 4.70746 4.73822 4.82224 4.82451 4.94692 5.05822 5.07801 5.08951 5.13476 5.14460 5.20031 5.21553 5.35752 5.41046 5.48819 5.90814 6.31260 6.48019 6.55834 6.88696 7.14421 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.312 6.312 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.025 4.025 6 C -0.076 4.076 7 O -0.552 6.552 8 Si 0.741 3.259 9 C -0.137 4.137 10 C -0.022 4.022 11 Cl -0.048 7.048 12 C 0.052 3.948 13 O -0.306 6.306 14 C 0.073 3.927 15 C -0.160 4.160 16 C 0.518 3.482 17 O -0.560 6.560 18 N -0.710 5.710 19 C 0.148 3.852 20 H 0.064 0.936 21 C -0.123 4.123 22 C -0.104 4.104 23 C -0.087 4.087 24 H 0.076 0.924 25 C 0.076 3.924 26 O -0.596 6.596 27 C -0.107 4.107 28 C -0.117 4.117 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.119 0.881 32 H 0.162 0.838 33 H 0.112 0.888 34 H 0.400 0.600 35 H -0.296 1.296 36 H -0.276 1.276 37 H 0.155 0.845 38 H 0.100 0.900 39 H 0.058 0.942 40 H 0.080 0.920 41 H 0.098 0.902 42 H 0.416 0.584 43 H 0.041 0.959 44 H 0.075 0.925 45 H 0.059 0.941 46 H 0.054 0.946 47 H 0.060 0.940 48 H 0.048 0.952 49 H 0.395 0.605 50 H 0.088 0.912 51 H 0.065 0.935 52 H 0.086 0.914 53 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.509 2.439 -4.648 6.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.225 6.225 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.026 4.026 6 C -0.185 4.185 7 O -0.363 6.363 8 Si 0.646 3.354 9 C -0.155 4.155 10 C -0.050 4.050 11 Cl -0.019 7.019 12 C 0.006 3.994 13 O -0.222 6.222 14 C 0.014 3.986 15 C -0.217 4.217 16 C 0.303 3.697 17 O -0.437 6.437 18 N -0.363 5.363 19 C 0.044 3.956 20 H 0.083 0.917 21 C -0.162 4.162 22 C -0.142 4.142 23 C -0.105 4.105 24 H 0.095 0.905 25 C -0.002 4.002 26 O -0.404 6.404 27 C -0.145 4.145 28 C -0.155 4.155 29 H 0.087 0.913 30 H 0.088 0.912 31 H 0.137 0.863 32 H 0.180 0.820 33 H 0.129 0.871 34 H 0.251 0.749 35 H -0.223 1.223 36 H -0.202 1.202 37 H 0.172 0.828 38 H 0.117 0.883 39 H 0.077 0.923 40 H 0.098 0.902 41 H 0.117 0.883 42 H 0.253 0.747 43 H 0.060 0.940 44 H 0.093 0.907 45 H 0.077 0.923 46 H 0.073 0.927 47 H 0.078 0.922 48 H 0.066 0.934 49 H 0.245 0.755 50 H 0.106 0.894 51 H 0.084 0.916 52 H 0.105 0.895 53 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.912 2.415 -4.262 5.699 hybrid contribution -0.572 0.147 -0.742 0.948 sum -3.485 2.562 -5.004 6.614 Atomic orbital electron populations 1.23460 0.76022 1.05914 1.02692 1.86213 1.23496 1.25068 1.87729 1.19203 0.90452 0.86152 0.96202 1.21306 1.01738 0.90049 1.05121 1.19214 0.92008 0.94635 0.96728 1.24829 0.99730 1.02313 0.91658 1.86517 1.58310 1.48220 1.43216 0.94139 0.80106 0.73979 0.87195 1.20839 0.93031 0.97228 1.04396 1.21028 0.85975 0.93552 1.04411 1.98408 1.08400 1.98465 1.96614 1.17780 0.87382 0.85387 1.08830 1.86260 1.69888 1.38065 1.27979 1.22327 0.92983 0.97412 0.85858 1.22226 0.98154 0.98903 1.02448 1.20536 0.86055 0.78668 0.84419 1.90729 1.65259 1.58851 1.28862 1.45870 1.23300 1.57174 1.10000 1.20999 0.83732 0.91590 0.99253 0.91749 1.21848 0.97964 0.95112 1.01233 1.21419 0.95448 0.99997 0.97349 1.21183 0.95893 0.95795 0.97630 0.90530 1.22306 0.96716 0.81115 1.00060 1.86430 1.38041 1.20183 1.95786 1.21453 0.96936 0.93106 1.02979 1.21749 0.96492 1.02088 0.95129 0.91281 0.91183 0.86317 0.82012 0.87066 0.74906 1.22300 1.20226 0.82840 0.88254 0.92311 0.90157 0.88347 0.74687 0.93976 0.90659 0.92263 0.92732 0.92188 0.93354 0.75534 0.89393 0.91619 0.89502 0.90033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.31 -1.04 8.19 -79.56 -0.65 -1.69 16 3 C 0.13 0.60 6.54 22.57 0.15 0.75 16 4 C -0.16 -0.16 8.60 22.36 0.19 0.03 16 5 C -0.03 -0.02 5.42 -19.86 -0.11 -0.13 16 6 C -0.08 0.27 2.81 71.24 0.20 0.47 16 7 O -0.55 1.18 12.74 -148.98 -1.90 -0.72 16 8 Si 0.74 -2.31 29.78 68.60 2.04 -0.26 16 9 C -0.14 -0.39 8.45 22.30 0.19 -0.20 16 10 C -0.02 -0.15 6.33 22.40 0.14 -0.01 16 11 Cl -0.05 -0.40 28.50 -2.72 -0.08 -0.48 16 12 C 0.05 0.43 5.56 22.58 0.13 0.56 16 13 O -0.31 -3.59 8.48 -67.38 -0.57 -4.16 16 14 C 0.07 0.40 3.19 29.85 0.10 0.50 16 15 C -0.16 -0.15 9.05 71.98 0.65 0.51 16 16 C 0.52 4.47 7.14 87.66 0.63 5.10 16 17 O -0.56 -10.47 16.17 15.96 0.26 -10.22 16 18 N -0.71 -0.79 5.04 -442.54 -2.23 -3.02 16 19 C 0.15 0.31 2.46 44.99 0.11 0.42 16 20 H 0.06 0.50 7.58 -2.39 -0.02 0.48 16 21 C -0.12 -0.46 5.49 30.60 0.17 -0.30 16 22 C -0.10 -0.37 5.10 30.60 0.16 -0.22 16 23 C -0.09 0.03 2.43 -10.79 -0.03 0.00 16 24 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 25 C 0.08 -0.06 6.43 71.98 0.46 0.40 16 26 O -0.60 -1.33 13.19 -148.98 -1.97 -3.29 16 27 C -0.11 0.38 5.20 30.59 0.16 0.54 16 28 C -0.12 0.46 5.39 30.59 0.16 0.63 16 29 H 0.07 -0.45 7.66 -2.39 -0.02 -0.46 16 30 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 31 H 0.12 -0.89 8.14 -2.39 -0.02 -0.91 16 32 H 0.16 -0.54 6.30 -2.91 -0.02 -0.56 16 33 H 0.11 -0.96 7.96 -2.39 -0.02 -0.98 16 34 H 0.40 -4.00 8.74 -74.05 -0.65 -4.65 16 35 H -0.30 -1.33 7.11 99.48 0.71 -0.62 16 36 H -0.28 -0.06 7.11 99.48 0.71 0.65 16 37 H 0.15 -0.05 4.86 -2.91 -0.01 -0.07 16 38 H 0.10 0.20 7.91 -2.39 -0.02 0.18 16 39 H 0.06 0.27 8.14 -2.38 -0.02 0.25 16 40 H 0.08 0.07 6.28 -2.39 -0.01 0.05 16 41 H 0.10 -0.51 7.92 -2.39 -0.02 -0.53 16 42 H 0.42 -2.44 8.38 -92.71 -0.78 -3.22 16 43 H 0.04 0.40 8.14 -2.39 -0.02 0.38 16 44 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 45 H 0.06 0.38 7.82 -2.39 -0.02 0.36 16 46 H 0.05 0.28 8.14 -2.39 -0.02 0.26 16 47 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 48 H 0.05 -0.07 8.14 -2.38 -0.02 -0.09 16 49 H 0.40 -2.35 9.12 -74.05 -0.68 -3.03 16 50 H 0.09 -0.55 8.14 -2.38 -0.02 -0.57 16 51 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 52 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 53 H 0.08 -0.41 8.14 -2.38 -0.02 -0.43 16 Total: 0.00 -27.02 437.63 -1.62 -28.64 By element: Atomic # 1 Polarization: -13.81 SS G_CDS: -1.10 Total: -14.91 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: 4.57 Total: 10.11 kcal Atomic # 7 Polarization: -0.79 SS G_CDS: -2.23 Total: -3.02 kcal Atomic # 8 Polarization: -15.25 SS G_CDS: -4.83 Total: -20.08 kcal Atomic # 14 Polarization: -2.31 SS G_CDS: 2.04 Total: -0.26 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -0.08 Total: -0.48 kcal Total: -27.02 -1.62 -28.64 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.794 kcal (2) G-P(sol) polarization free energy of solvation -27.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.809 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.621 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.636 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds