Wall clock time and date at job start Sun Mar 7 2021 20:37:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.34851 * 125.88567 * 245.02290 * 4 2 1 6 6 C 1.40896 * 107.41347 * 180.02562 * 5 4 2 7 7 C 1.34852 * 107.41486 * 359.97438 * 6 5 4 8 8 C 1.50698 * 125.88776 * 180.02562 * 7 6 5 9 9 C 1.50700 * 109.46832 * 84.98083 * 8 7 6 10 10 O 1.21278 * 120.00012 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00005 * 179.97438 * 9 8 7 12 12 C 1.46504 * 120.00210 * 179.97438 * 11 9 8 13 13 H 1.08998 * 109.46980 * 325.00972 * 12 11 9 14 14 C 1.53005 * 109.46848 * 85.00223 * 12 11 9 15 15 C 1.52999 * 109.47372 * 180.02562 * 14 12 11 16 16 C 1.53001 * 109.46860 * 300.00331 * 15 14 12 17 17 H 1.08994 * 109.46927 * 299.99383 * 16 15 14 18 18 C 1.53007 * 109.46817 * 179.97438 * 16 15 14 19 19 O 1.42898 * 109.47099 * 65.00030 * 18 16 15 20 20 C 1.52996 * 109.47441 * 60.00138 * 16 15 14 21 21 C 1.52998 * 109.47452 * 205.00169 * 12 11 9 22 22 N 1.36336 * 108.22107 * 359.74112 * 7 6 5 23 23 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 24 24 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 25 25 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 26 26 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 27 27 H 1.07995 * 126.29625 * 0.02562 * 5 4 2 28 28 H 1.07994 * 126.29310 * 179.97438 * 6 5 4 29 29 H 1.09000 * 109.47402 * 204.97514 * 8 7 6 30 30 H 1.09004 * 109.47569 * 324.98476 * 8 7 6 31 31 H 0.97000 * 120.00549 * 0.02562 * 11 9 8 32 32 H 1.08996 * 109.47014 * 300.00452 * 14 12 11 33 33 H 1.09000 * 109.46754 * 59.99812 * 14 12 11 34 34 H 1.08993 * 109.47088 * 180.02562 * 15 14 12 35 35 H 1.09008 * 109.46827 * 59.99967 * 15 14 12 36 36 H 1.09001 * 109.46827 * 184.99961 * 18 16 15 37 37 H 1.09003 * 109.47008 * 304.99863 * 18 16 15 38 38 H 0.96699 * 114.00220 * 180.02562 * 19 18 16 39 39 H 1.08998 * 109.47487 * 180.02562 * 20 16 15 40 40 H 1.09000 * 109.47580 * 59.99256 * 20 16 15 41 41 H 1.08994 * 109.47049 * 300.00014 * 21 12 11 42 42 H 1.09003 * 109.47127 * 60.00389 * 21 12 11 43 43 H 0.97008 * 125.64208 * 180.26309 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 2.6296 -0.1484 2.2381 6 6 2.8977 -1.1604 3.1811 7 6 2.3524 -2.3019 2.7141 8 6 2.3930 -3.6444 3.3975 9 6 1.2615 -3.7381 4.3884 10 8 0.4976 -2.8063 4.5264 11 7 1.0984 -4.8574 5.1212 12 6 -0.0013 -4.9483 6.0849 13 1 -0.1725 -3.9701 6.5342 14 6 -1.2716 -5.4091 5.3672 15 6 -2.4203 -5.5034 6.3734 16 6 -2.0586 -6.5103 7.4672 17 1 -1.8877 -7.4887 7.0183 18 6 -3.2071 -6.6042 8.4738 19 8 -4.3624 -7.1446 7.8294 20 6 -0.7885 -6.0495 8.1850 21 6 0.3606 -5.9555 7.1783 22 7 1.7525 -2.0306 1.5203 23 1 -0.3934 0.4418 0.7650 24 1 1.7924 -0.5139 -0.8899 25 1 1.5616 2.4678 -1.2086 26 1 1.5878 2.4586 1.2241 27 1 2.9285 0.8869 2.3091 28 1 3.4401 -1.0433 4.1075 29 1 2.2905 -4.4343 2.6533 30 1 3.3433 -3.7580 3.9194 31 1 1.7095 -5.6026 5.0112 32 1 -1.5293 -4.6916 4.5883 33 1 -1.1004 -6.3873 4.9178 34 1 -3.3250 -5.8321 5.8622 35 1 -2.5912 -4.5249 6.8224 36 1 -2.9146 -7.2531 9.2993 37 1 -3.4366 -5.6098 8.8570 38 1 -5.1313 -7.2324 8.4092 39 1 -0.5306 -6.7670 8.9639 40 1 -0.9594 -5.0710 8.6339 41 1 0.5316 -6.9337 6.7290 42 1 1.2655 -5.6272 7.6897 43 1 1.2793 -2.6716 0.9668 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7207542_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 20:37:35 Heat of formation + Delta-G solvation = -94.356518 kcal Electronic energy + Delta-G solvation = -23808.973298 eV Core-core repulsion = 20241.269681 eV Total energy + Delta-G solvation = -3567.703618 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.162 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.34677 -41.00782 -39.52917 -37.88515 -37.44341 -35.20603 -33.25066 -31.94355 -31.82146 -31.30117 -29.26932 -26.30618 -25.02965 -23.82809 -22.47016 -21.67491 -21.37337 -21.14522 -20.74124 -19.05907 -18.35807 -17.96741 -17.56447 -16.81543 -16.48890 -16.38396 -16.02366 -15.82679 -15.37578 -15.10727 -15.06436 -14.66227 -14.54400 -14.35188 -14.09207 -13.94679 -13.86006 -13.68965 -13.40286 -13.19236 -12.98787 -12.76382 -12.28449 -12.19755 -12.15646 -11.86022 -11.61977 -11.46402 -11.31771 -10.93485 -10.84361 -10.82955 -10.07140 -9.80828 -8.97918 -4.88608 1.08138 1.29195 1.62284 1.67033 1.84073 1.93756 2.30698 2.50401 3.28393 3.36323 3.58969 3.68329 3.74821 3.80296 3.87637 4.00207 4.09444 4.20601 4.27981 4.33630 4.38789 4.41129 4.46675 4.49404 4.49836 4.58159 4.63116 4.68732 4.79475 4.81091 4.93677 5.05606 5.06897 5.11394 5.18068 5.24613 5.28121 5.34520 5.42385 5.52369 5.97846 6.12430 6.36650 6.54087 6.66641 6.86003 7.27694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.064 4.064 3 Si 0.802 3.198 4 C -0.018 4.018 5 C -0.202 4.202 6 C -0.200 4.200 7 C 0.035 3.965 8 C -0.067 4.067 9 C 0.509 3.491 10 O -0.579 6.579 11 N -0.715 5.715 12 C 0.148 3.852 13 H 0.061 0.939 14 C -0.122 4.122 15 C -0.105 4.105 16 C -0.086 4.086 17 H 0.076 0.924 18 C 0.075 3.925 19 O -0.597 6.597 20 C -0.108 4.108 21 C -0.116 4.116 22 N -0.537 5.537 23 H 0.385 0.615 24 H 0.127 0.873 25 H -0.297 1.297 26 H -0.291 1.291 27 H 0.149 0.851 28 H 0.141 0.859 29 H 0.128 0.872 30 H 0.146 0.854 31 H 0.418 0.582 32 H 0.038 0.962 33 H 0.073 0.927 34 H 0.056 0.944 35 H 0.052 0.948 36 H 0.060 0.940 37 H 0.048 0.952 38 H 0.395 0.605 39 H 0.087 0.913 40 H 0.064 0.936 41 H 0.085 0.915 42 H 0.083 0.917 43 H 0.418 0.582 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.329 -5.612 2.817 8.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.172 4.172 3 Si 0.705 3.295 4 C -0.131 4.131 5 C -0.227 4.227 6 C -0.225 4.225 7 C -0.080 4.080 8 C -0.107 4.107 9 C 0.296 3.704 10 O -0.458 6.458 11 N -0.367 5.367 12 C 0.043 3.957 13 H 0.079 0.921 14 C -0.160 4.160 15 C -0.143 4.143 16 C -0.105 4.105 17 H 0.094 0.906 18 C -0.003 4.003 19 O -0.405 6.405 20 C -0.146 4.146 21 C -0.154 4.154 22 N -0.133 5.133 23 H 0.234 0.766 24 H 0.144 0.856 25 H -0.224 1.224 26 H -0.218 1.218 27 H 0.167 0.833 28 H 0.159 0.841 29 H 0.146 0.854 30 H 0.164 0.836 31 H 0.255 0.745 32 H 0.057 0.943 33 H 0.091 0.909 34 H 0.075 0.925 35 H 0.071 0.929 36 H 0.079 0.921 37 H 0.066 0.934 38 H 0.245 0.755 39 H 0.105 0.895 40 H 0.083 0.917 41 H 0.104 0.896 42 H 0.102 0.898 43 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 4.995 -4.559 1.771 6.991 hybrid contribution -1.867 -0.521 0.717 2.067 sum 3.128 -5.080 2.488 6.464 Atomic orbital electron populations 1.86536 1.18985 1.80604 1.50144 1.25037 0.83033 1.12458 0.96705 0.93398 0.89980 0.70035 0.76050 1.20905 1.07174 0.84825 1.00208 1.20913 1.05950 1.00218 0.95603 1.20849 1.07881 0.92346 1.01412 1.19932 1.02351 0.96977 0.88704 1.20266 0.99307 0.93649 0.97466 1.21092 0.85904 0.81838 0.81564 1.90750 1.47438 1.39401 1.68215 1.45971 1.32115 1.17991 1.40648 1.20912 0.85969 0.99588 0.89249 0.92063 1.21834 0.95084 1.01171 0.97953 1.21422 0.97536 0.98883 0.96481 1.21182 0.94207 0.99499 0.95591 0.90597 1.22323 0.85709 0.97579 0.94666 1.86429 1.24068 1.86803 1.43199 1.21473 0.92868 1.02357 0.97896 1.21748 0.99009 0.99233 0.95419 1.41902 1.43558 1.09346 1.18453 0.76568 0.85553 1.22442 1.21755 0.83321 0.84121 0.85419 0.83627 0.74465 0.94280 0.90860 0.92515 0.92872 0.92141 0.93393 0.75519 0.89465 0.91694 0.89637 0.89828 0.74438 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.35 12.88 -148.98 -1.92 -5.27 16 2 C -0.06 -0.14 3.08 71.24 0.22 0.08 16 3 Si 0.80 0.30 30.60 68.60 2.10 2.40 16 4 C -0.02 -0.08 6.50 41.08 0.27 0.19 16 5 C -0.20 -1.09 9.37 22.14 0.21 -0.89 16 6 C -0.20 -1.15 10.77 22.14 0.24 -0.91 16 7 C 0.03 0.11 5.66 41.08 0.23 0.34 16 8 C -0.07 0.28 6.24 29.10 0.18 0.46 16 9 C 0.51 1.27 7.79 87.66 0.68 1.95 16 10 O -0.58 -7.97 15.70 -3.02 -0.05 -8.01 16 11 N -0.71 2.28 5.08 -442.53 -2.25 0.03 16 12 C 0.15 -0.03 2.45 44.99 0.11 0.08 16 13 H 0.06 0.35 7.58 -2.39 -0.02 0.34 16 14 C -0.12 -0.28 5.49 30.60 0.17 -0.11 16 15 C -0.11 -0.30 5.10 30.59 0.16 -0.14 16 16 C -0.09 0.09 2.43 -10.79 -0.03 0.06 16 17 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 18 C 0.07 -0.10 6.43 71.98 0.46 0.37 16 19 O -0.60 -1.12 13.19 -148.98 -1.97 -3.08 16 20 C -0.11 0.49 5.20 30.61 0.16 0.65 16 21 C -0.12 0.66 5.39 30.61 0.17 0.83 16 22 N -0.54 -1.79 6.07 -171.12 -1.04 -2.83 16 23 H 0.39 0.95 8.70 -74.06 -0.64 0.31 16 24 H 0.13 -0.10 7.96 -2.39 -0.02 -0.12 16 25 H -0.30 -1.98 7.11 99.48 0.71 -1.28 16 26 H -0.29 -1.69 7.11 99.48 0.71 -0.99 16 27 H 0.15 0.35 6.24 -2.91 -0.02 0.33 16 28 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 29 H 0.13 -1.24 8.14 -2.39 -0.02 -1.26 16 30 H 0.15 -1.42 8.14 -2.38 -0.02 -1.44 16 31 H 0.42 -4.35 8.60 -92.71 -0.80 -5.15 16 32 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 33 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 34 H 0.06 0.34 7.82 -2.39 -0.02 0.32 16 35 H 0.05 0.24 8.14 -2.38 -0.02 0.22 16 36 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 37 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 38 H 0.40 -2.49 9.12 -74.06 -0.68 -3.17 16 39 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 40 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 42 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 43 H 0.42 0.01 8.96 -92.70 -0.83 -0.82 16 Total: 0.00 -24.58 350.38 -3.76 -28.34 By element: Atomic # 1 Polarization: -12.67 SS G_CDS: -1.86 Total: -14.54 kcal Atomic # 6 Polarization: -0.27 SS G_CDS: 3.22 Total: 2.95 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -3.29 Total: -2.80 kcal Atomic # 8 Polarization: -12.43 SS G_CDS: -3.93 Total: -16.36 kcal Atomic # 14 Polarization: 0.30 SS G_CDS: 2.10 Total: 2.40 kcal Total: -24.58 -3.76 -28.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7207542_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.015 kcal (2) G-P(sol) polarization free energy of solvation -24.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.342 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.357 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds