Wall clock time and date at job start Sun Mar 7 2021 21:59:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42897 * 109.46840 * 2 1 4 4 C 1.35898 * 117.00452 * 275.16841 * 3 2 1 5 5 C 1.38737 * 120.05199 * 5.19841 * 4 3 2 6 6 C 1.38148 * 119.94002 * 180.27344 * 5 4 3 7 7 C 1.38266 * 120.05801 * 359.97438 * 6 5 4 8 8 C 1.50698 * 119.94202 * 180.02562 * 7 6 5 9 9 O 1.42900 * 109.47172 * 119.97850 * 8 7 6 10 10 Si 1.86300 * 109.47232 * 359.97438 * 8 7 6 11 11 C 1.38264 * 120.11140 * 359.97438 * 7 6 5 12 12 C 1.38145 * 120.05717 * 0.02562 * 11 7 6 13 13 C 1.50698 * 109.47363 * 120.00347 * 2 1 3 14 14 O 1.21273 * 120.00076 * 245.00268 * 13 2 1 15 15 N 1.34774 * 119.99942 * 64.99940 * 13 2 1 16 16 C 1.46505 * 120.00210 * 180.02562 * 15 13 2 17 17 H 1.09004 * 112.84526 * 336.19406 * 16 15 13 18 18 C 1.53779 * 113.61464 * 107.49798 * 16 15 13 19 19 C 1.53788 * 87.07744 * 89.12195 * 18 16 15 20 20 H 1.08994 * 113.61337 * 139.98368 * 19 18 16 21 21 O 1.42900 * 113.68821 * 270.87069 * 19 18 16 22 22 C 1.53781 * 113.61511 * 205.00267 * 16 15 13 23 23 H 1.08999 * 109.47134 * 299.99571 * 1 2 3 24 24 H 1.08999 * 109.47499 * 60.00152 * 1 2 3 25 25 H 1.09006 * 109.47272 * 179.97438 * 1 2 3 26 26 H 1.09007 * 109.46951 * 240.00698 * 2 1 3 27 27 H 1.08001 * 120.02716 * 0.24808 * 5 4 3 28 28 H 1.08000 * 119.96802 * 180.02562 * 6 5 4 29 29 H 1.09004 * 109.47120 * 239.97512 * 8 7 6 30 30 H 0.96699 * 113.99935 * 180.02562 * 9 8 7 31 31 H 1.48498 * 110.00307 * 298.68161 * 10 8 7 32 32 H 1.48504 * 109.99827 * 60.00503 * 10 8 7 33 33 H 1.08002 * 119.97138 * 180.02562 * 11 7 6 34 34 H 1.07998 * 120.03188 * 179.97438 * 12 11 7 35 35 H 0.97005 * 120.00387 * 359.97438 * 15 13 2 36 36 H 1.08995 * 113.61198 * 203.66533 * 18 16 15 37 37 H 1.08998 * 113.61847 * 334.57251 * 18 16 15 38 38 H 0.96706 * 114.00329 * 277.53777 * 21 19 18 39 39 H 1.08999 * 113.61599 * 25.42613 * 22 16 15 40 40 H 1.08996 * 113.61532 * 156.33280 * 22 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0062 1.3473 0.0000 4 6 2.1090 1.9654 -1.2059 5 6 1.6582 1.3292 -2.3534 6 6 1.7690 1.9574 -3.5788 7 6 2.3282 3.2192 -3.6622 8 6 2.4472 3.9023 -5.0001 9 8 1.7140 5.1286 -4.9759 10 14 1.7572 2.7922 -6.3277 11 6 2.7772 3.8557 -2.5199 12 6 2.6687 3.2319 -1.2921 13 6 2.0324 -0.7105 1.2304 14 8 2.6529 -0.0980 2.0733 15 7 1.7919 -2.0265 1.3940 16 6 2.2798 -2.7171 2.5904 17 1 3.1334 -2.2176 3.0489 18 6 1.1677 -3.0811 3.5882 19 6 1.0197 -4.4048 2.8195 20 1 0.8553 -5.2680 3.4643 21 8 0.0923 -4.3380 1.7344 22 6 2.4854 -4.2277 2.3889 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8933 -0.5138 -0.8901 27 1 1.2214 0.3436 -2.2888 28 1 1.4178 1.4628 -4.4723 29 1 3.4965 4.1105 -5.2097 30 1 1.7461 5.6226 -5.8065 31 1 2.5316 1.5264 -6.3846 32 1 0.3271 2.5009 -6.0536 33 1 3.2133 4.8415 -2.5875 34 1 3.0200 3.7293 -0.4001 35 1 1.2952 -2.5163 0.7200 36 1 1.5229 -3.2074 4.6108 37 1 0.2916 -2.4362 3.5199 38 1 -0.8313 -4.4487 1.9989 39 1 2.6730 -4.5085 1.3525 40 1 3.2008 -4.6675 3.0838 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_10157680.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:21 Heat of formation + Delta-G solvation = -87.003147 kcal Electronic energy + Delta-G solvation = -23538.336657 eV Core-core repulsion = 19900.544721 eV Total energy + Delta-G solvation = -3637.791935 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.83921 -41.09035 -39.82202 -38.75056 -37.19749 -36.16563 -34.39208 -32.91969 -31.86092 -31.53534 -26.92517 -26.80637 -26.12289 -24.89843 -23.99607 -22.36318 -21.42303 -20.71881 -19.50314 -18.89953 -18.37997 -18.03861 -17.34301 -16.87569 -16.66685 -16.65789 -16.33308 -15.71604 -15.65516 -15.51127 -15.34499 -14.84729 -14.53004 -14.25428 -14.04636 -13.82108 -13.74434 -13.63413 -13.47756 -13.32298 -12.91088 -12.79723 -12.47470 -12.41346 -12.09987 -11.88505 -11.80739 -11.60938 -10.89877 -10.76015 -10.31385 -10.10637 -10.02199 -9.15934 -4.98384 0.29298 0.31509 1.28413 1.47842 1.50864 1.62291 1.95835 2.46563 2.64825 2.87754 3.33385 3.38526 3.41597 3.55448 3.66071 3.67238 3.73499 3.77651 3.82218 3.95213 3.97591 4.22581 4.30172 4.38877 4.46652 4.52330 4.53379 4.55774 4.67243 4.68349 4.73736 4.84909 4.87496 4.92938 4.94787 5.18858 5.26017 5.47817 5.52018 5.69898 6.27654 6.41438 6.50466 6.63814 7.14416 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.067 3.933 3 O -0.282 6.282 4 C 0.136 3.864 5 C -0.206 4.206 6 C -0.082 4.082 7 C -0.113 4.113 8 C -0.066 4.066 9 O -0.546 6.546 10 Si 0.681 3.319 11 C -0.047 4.047 12 C -0.144 4.144 13 C 0.521 3.479 14 O -0.514 6.514 15 N -0.702 5.702 16 C 0.125 3.875 17 H 0.105 0.895 18 C -0.185 4.185 19 C 0.077 3.923 20 H 0.073 0.927 21 O -0.555 6.555 22 C -0.141 4.141 23 H 0.077 0.923 24 H 0.077 0.923 25 H 0.081 0.919 26 H 0.099 0.901 27 H 0.133 0.867 28 H 0.120 0.880 29 H 0.074 0.926 30 H 0.382 0.618 31 H -0.256 1.256 32 H -0.251 1.251 33 H 0.137 0.863 34 H 0.138 0.862 35 H 0.408 0.592 36 H 0.101 0.899 37 H 0.078 0.922 38 H 0.386 0.614 39 H 0.084 0.916 40 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.556 -3.445 -3.381 5.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.007 3.993 3 O -0.195 6.195 4 C 0.090 3.910 5 C -0.225 4.225 6 C -0.100 4.100 7 C -0.113 4.113 8 C -0.177 4.177 9 O -0.352 6.352 10 Si 0.583 3.417 11 C -0.065 4.065 12 C -0.163 4.163 13 C 0.305 3.695 14 O -0.388 6.388 15 N -0.356 5.356 16 C 0.020 3.980 17 H 0.123 0.877 18 C -0.224 4.224 19 C 0.018 3.982 20 H 0.091 0.909 21 O -0.361 6.361 22 C -0.179 4.179 23 H 0.096 0.904 24 H 0.096 0.904 25 H 0.100 0.900 26 H 0.117 0.883 27 H 0.151 0.849 28 H 0.138 0.862 29 H 0.092 0.908 30 H 0.229 0.771 31 H -0.181 1.181 32 H -0.176 1.176 33 H 0.154 0.846 34 H 0.156 0.844 35 H 0.245 0.755 36 H 0.119 0.881 37 H 0.097 0.903 38 H 0.234 0.766 39 H 0.102 0.898 40 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -0.999 -3.799 -2.483 4.647 hybrid contribution -0.670 -0.505 0.432 0.944 sum -1.670 -4.304 -2.051 5.052 Atomic orbital electron populations 1.22352 0.92221 1.04074 1.04805 1.22180 0.96030 0.83155 0.97975 1.86224 1.80877 1.25462 1.26913 1.19057 0.95146 0.92894 0.83879 1.21155 1.07274 1.01825 0.92238 1.20631 0.97783 0.94782 0.96811 1.19258 1.02829 0.94734 0.94519 1.24604 0.99395 0.92807 1.00897 1.86495 1.73896 1.34313 1.40535 0.95368 0.80380 0.80038 0.85928 1.20839 0.96188 0.99120 0.90375 1.20550 1.03196 0.93523 0.99014 1.20068 0.79851 0.82229 0.87358 1.90763 1.38935 1.65611 1.43467 1.45521 1.57822 1.08576 1.23718 1.21779 0.97564 0.92611 0.86053 0.87660 1.24145 1.00434 0.98335 0.99470 1.22801 0.90393 0.96591 0.88445 0.90925 1.86344 1.20045 1.95660 1.34074 1.23461 0.95394 0.95131 1.03948 0.90431 0.90370 0.89986 0.88322 0.84940 0.86244 0.90833 0.77074 1.18092 1.17592 0.84565 0.84424 0.75518 0.88087 0.90348 0.76607 0.89785 0.87053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.10 9.12 37.16 0.34 0.44 16 2 C 0.07 0.10 2.64 -27.89 -0.07 0.03 16 3 O -0.28 -1.30 9.34 -39.28 -0.37 -1.66 16 4 C 0.14 0.51 6.60 -39.21 -0.26 0.25 16 5 C -0.21 -0.50 8.24 -39.43 -0.33 -0.82 16 6 C -0.08 -0.23 8.66 -39.60 -0.34 -0.58 16 7 C -0.11 -0.32 5.42 -104.60 -0.57 -0.89 16 8 C -0.07 -0.02 2.81 36.00 0.10 0.08 16 9 O -0.55 -0.28 12.74 -35.23 -0.45 -0.73 16 10 Si 0.68 -0.56 29.78 -169.99 -5.06 -5.62 16 11 C -0.05 -0.13 9.60 -39.61 -0.38 -0.51 16 12 C -0.14 -0.50 9.99 -39.43 -0.39 -0.89 16 13 C 0.52 1.69 7.18 -10.99 -0.08 1.62 16 14 O -0.51 -3.98 16.11 -14.30 -0.23 -4.21 16 15 N -0.70 -0.28 5.11 -53.02 -0.27 -0.55 16 16 C 0.13 0.02 4.32 -67.12 -0.29 -0.27 16 17 H 0.11 0.18 7.46 -51.93 -0.39 -0.21 16 18 C -0.18 0.23 7.71 -25.92 -0.20 0.03 16 19 C 0.08 -0.17 5.27 -25.91 -0.14 -0.31 16 20 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 21 O -0.55 1.19 12.32 -35.23 -0.43 0.76 16 22 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 23 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 24 H 0.08 -0.06 6.91 -51.93 -0.36 -0.42 16 25 H 0.08 -0.22 7.92 -51.93 -0.41 -0.63 16 26 H 0.10 -0.06 6.31 -51.93 -0.33 -0.39 16 27 H 0.13 -0.01 5.43 -52.49 -0.28 -0.29 16 28 H 0.12 0.23 4.87 -52.49 -0.26 -0.03 16 29 H 0.07 -0.09 7.96 -51.93 -0.41 -0.51 16 30 H 0.38 -1.74 8.74 45.56 0.40 -1.35 16 31 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 32 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 33 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 34 H 0.14 0.35 8.06 -52.49 -0.42 -0.07 16 35 H 0.41 -0.55 7.38 -40.82 -0.30 -0.85 16 36 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 37 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.39 -2.11 9.12 45.56 0.42 -1.70 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 LS Contribution 331.93 15.07 5.00 5.00 Total: 0.00 -9.94 331.93 -9.12 -19.07 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -4.51 Total: -10.28 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: -2.81 Total: -1.77 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.27 Total: -0.55 kcal Atomic # 8 Polarization: -4.37 SS G_CDS: -1.48 Total: -5.85 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.06 Total: -5.62 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -9.94 -9.12 -19.07 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_10157680.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.935 kcal (2) G-P(sol) polarization free energy of solvation -9.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.879 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.068 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds