Wall clock time and date at job start Sun Mar 7 2021 21:59:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42897 * 109.46840 * 2 1 4 4 C 1.35898 * 117.00452 * 275.16841 * 3 2 1 5 5 C 1.38737 * 120.05199 * 5.19841 * 4 3 2 6 6 C 1.38148 * 119.94002 * 180.27344 * 5 4 3 7 7 C 1.38266 * 120.05801 * 359.97438 * 6 5 4 8 8 C 1.50698 * 119.94202 * 180.02562 * 7 6 5 9 9 O 1.42900 * 109.47172 * 119.97850 * 8 7 6 10 10 Si 1.86300 * 109.47232 * 359.97438 * 8 7 6 11 11 C 1.38264 * 120.11140 * 359.97438 * 7 6 5 12 12 C 1.38145 * 120.05717 * 0.02562 * 11 7 6 13 13 C 1.50698 * 109.47363 * 120.00347 * 2 1 3 14 14 O 1.21273 * 120.00076 * 245.00268 * 13 2 1 15 15 N 1.34774 * 119.99942 * 64.99940 * 13 2 1 16 16 C 1.46505 * 120.00210 * 180.02562 * 15 13 2 17 17 H 1.09004 * 112.84526 * 336.19406 * 16 15 13 18 18 C 1.53779 * 113.61464 * 107.49798 * 16 15 13 19 19 C 1.53788 * 87.07744 * 89.12195 * 18 16 15 20 20 H 1.08994 * 113.61337 * 139.98368 * 19 18 16 21 21 O 1.42900 * 113.68821 * 270.87069 * 19 18 16 22 22 C 1.53781 * 113.61511 * 205.00267 * 16 15 13 23 23 H 1.08999 * 109.47134 * 299.99571 * 1 2 3 24 24 H 1.08999 * 109.47499 * 60.00152 * 1 2 3 25 25 H 1.09006 * 109.47272 * 179.97438 * 1 2 3 26 26 H 1.09007 * 109.46951 * 240.00698 * 2 1 3 27 27 H 1.08001 * 120.02716 * 0.24808 * 5 4 3 28 28 H 1.08000 * 119.96802 * 180.02562 * 6 5 4 29 29 H 1.09004 * 109.47120 * 239.97512 * 8 7 6 30 30 H 0.96699 * 113.99935 * 180.02562 * 9 8 7 31 31 H 1.48498 * 110.00307 * 298.68161 * 10 8 7 32 32 H 1.48504 * 109.99827 * 60.00503 * 10 8 7 33 33 H 1.08002 * 119.97138 * 180.02562 * 11 7 6 34 34 H 1.07998 * 120.03188 * 179.97438 * 12 11 7 35 35 H 0.97005 * 120.00387 * 359.97438 * 15 13 2 36 36 H 1.08995 * 113.61198 * 203.66533 * 18 16 15 37 37 H 1.08998 * 113.61847 * 334.57251 * 18 16 15 38 38 H 0.96706 * 114.00329 * 277.53777 * 21 19 18 39 39 H 1.08999 * 113.61599 * 25.42613 * 22 16 15 40 40 H 1.08996 * 113.61532 * 156.33280 * 22 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0062 1.3473 0.0000 4 6 2.1090 1.9654 -1.2059 5 6 1.6582 1.3292 -2.3534 6 6 1.7690 1.9574 -3.5788 7 6 2.3282 3.2192 -3.6622 8 6 2.4472 3.9023 -5.0001 9 8 1.7140 5.1286 -4.9759 10 14 1.7572 2.7922 -6.3277 11 6 2.7772 3.8557 -2.5199 12 6 2.6687 3.2319 -1.2921 13 6 2.0324 -0.7105 1.2304 14 8 2.6529 -0.0980 2.0733 15 7 1.7919 -2.0265 1.3940 16 6 2.2798 -2.7171 2.5904 17 1 3.1334 -2.2176 3.0489 18 6 1.1677 -3.0811 3.5882 19 6 1.0197 -4.4048 2.8195 20 1 0.8553 -5.2680 3.4643 21 8 0.0923 -4.3380 1.7344 22 6 2.4854 -4.2277 2.3889 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8933 -0.5138 -0.8901 27 1 1.2214 0.3436 -2.2888 28 1 1.4178 1.4628 -4.4723 29 1 3.4965 4.1105 -5.2097 30 1 1.7461 5.6226 -5.8065 31 1 2.5316 1.5264 -6.3846 32 1 0.3271 2.5009 -6.0536 33 1 3.2133 4.8415 -2.5875 34 1 3.0200 3.7293 -0.4001 35 1 1.2952 -2.5163 0.7200 36 1 1.5229 -3.2074 4.6108 37 1 0.2916 -2.4362 3.5199 38 1 -0.8313 -4.4487 1.9989 39 1 2.6730 -4.5085 1.3525 40 1 3.2008 -4.6675 3.0838 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_10157680.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:20 Heat of formation + Delta-G solvation = -90.610980 kcal Electronic energy + Delta-G solvation = -23538.493104 eV Core-core repulsion = 19900.544721 eV Total energy + Delta-G solvation = -3637.948383 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.00578 -41.16283 -39.90300 -38.91044 -37.23403 -36.09845 -34.51552 -33.01091 -32.01661 -31.65153 -26.87592 -26.80568 -26.16177 -24.93202 -24.13562 -22.50435 -21.56212 -20.69871 -19.66740 -18.91713 -18.34809 -17.99380 -17.49820 -17.00586 -16.79589 -16.72630 -16.29423 -15.87977 -15.77613 -15.61135 -15.36197 -14.89684 -14.61007 -14.37498 -14.10030 -13.88935 -13.68992 -13.59113 -13.50337 -13.45310 -13.01936 -12.70947 -12.52471 -12.36845 -12.23263 -12.01891 -11.88492 -11.50505 -11.05597 -10.72061 -10.30153 -10.21993 -10.20663 -9.34910 -4.92983 0.08619 0.13294 1.27352 1.31838 1.36301 1.65129 1.97016 2.36001 2.47378 3.07615 3.31064 3.40809 3.44350 3.49819 3.60899 3.65989 3.72911 3.74301 3.81934 3.92125 4.09186 4.11367 4.23216 4.37042 4.47758 4.48724 4.58536 4.65337 4.69117 4.77580 4.78407 4.81995 4.93474 4.94851 4.98972 5.03147 5.06384 5.33638 5.43825 5.54279 6.11412 6.34819 6.82783 6.93099 6.99301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C 0.064 3.936 3 O -0.308 6.308 4 C 0.120 3.880 5 C -0.204 4.204 6 C -0.097 4.097 7 C -0.128 4.128 8 C -0.077 4.077 9 O -0.565 6.565 10 Si 0.774 3.226 11 C -0.054 4.054 12 C -0.159 4.159 13 C 0.517 3.483 14 O -0.569 6.569 15 N -0.685 5.685 16 C 0.107 3.893 17 H 0.082 0.918 18 C -0.182 4.182 19 C 0.086 3.914 20 H 0.090 0.910 21 O -0.567 6.567 22 C -0.135 4.135 23 H 0.062 0.938 24 H 0.083 0.917 25 H 0.108 0.892 26 H 0.122 0.878 27 H 0.156 0.844 28 H 0.127 0.873 29 H 0.093 0.907 30 H 0.403 0.597 31 H -0.286 1.286 32 H -0.295 1.295 33 H 0.148 0.852 34 H 0.137 0.863 35 H 0.419 0.581 36 H 0.109 0.891 37 H 0.068 0.932 38 H 0.400 0.600 39 H 0.081 0.919 40 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.122 -4.474 -4.524 6.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.228 4.228 2 C 0.004 3.996 3 O -0.222 6.222 4 C 0.075 3.925 5 C -0.222 4.222 6 C -0.114 4.114 7 C -0.128 4.128 8 C -0.186 4.186 9 O -0.375 6.375 10 Si 0.680 3.320 11 C -0.072 4.072 12 C -0.178 4.178 13 C 0.303 3.697 14 O -0.448 6.448 15 N -0.339 5.339 16 C 0.002 3.998 17 H 0.100 0.900 18 C -0.220 4.220 19 C 0.026 3.974 20 H 0.108 0.892 21 O -0.375 6.375 22 C -0.172 4.172 23 H 0.081 0.919 24 H 0.102 0.898 25 H 0.126 0.874 26 H 0.139 0.861 27 H 0.173 0.827 28 H 0.144 0.856 29 H 0.111 0.889 30 H 0.254 0.746 31 H -0.214 1.214 32 H -0.223 1.223 33 H 0.166 0.834 34 H 0.155 0.845 35 H 0.258 0.742 36 H 0.127 0.873 37 H 0.086 0.914 38 H 0.251 0.749 39 H 0.099 0.901 40 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.583 -4.836 -3.655 6.266 hybrid contribution -0.520 -0.208 0.800 0.976 sum -2.102 -5.044 -2.855 6.166 Atomic orbital electron populations 1.22341 0.90505 1.05610 1.04307 1.22396 0.97245 0.82114 0.97802 1.86191 1.81424 1.26926 1.27637 1.19207 0.95934 0.93225 0.84113 1.21379 1.06616 1.02638 0.91598 1.20853 0.98149 0.95162 0.97273 1.19689 1.02260 0.95015 0.95824 1.24798 1.00796 0.93189 0.99831 1.86442 1.73996 1.34498 1.42565 0.94354 0.76110 0.77539 0.84018 1.21013 0.96319 0.99648 0.90185 1.20739 1.03627 0.93934 0.99495 1.20470 0.79073 0.82829 0.87316 1.90732 1.41687 1.66880 1.45457 1.45448 1.56802 1.07699 1.23937 1.21971 0.97684 0.93709 0.86460 0.89964 1.24147 0.99273 0.98893 0.99730 1.22747 0.90033 0.96305 0.88288 0.89218 1.86305 1.21225 1.95647 1.34363 1.23489 0.96416 0.93083 1.04253 0.91902 0.89832 0.87381 0.86077 0.82703 0.85618 0.88922 0.74568 1.21358 1.22297 0.83427 0.84500 0.74240 0.87268 0.91358 0.74899 0.90057 0.85534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.19 9.12 71.98 0.66 0.85 16 2 C 0.06 0.24 2.64 29.85 0.08 0.32 16 3 O -0.31 -3.39 9.34 -73.41 -0.69 -4.08 16 4 C 0.12 1.07 6.60 22.51 0.15 1.22 16 5 C -0.20 -1.05 8.24 22.37 0.18 -0.87 16 6 C -0.10 -0.57 8.66 22.26 0.19 -0.38 16 7 C -0.13 -0.76 5.42 -19.85 -0.11 -0.87 16 8 C -0.08 0.00 2.81 71.24 0.20 0.20 16 9 O -0.57 -0.15 12.74 -148.98 -1.90 -2.05 16 10 Si 0.77 -1.66 29.78 68.60 2.04 0.38 16 11 C -0.05 -0.35 9.60 22.25 0.21 -0.13 16 12 C -0.16 -1.37 9.99 22.37 0.22 -1.15 16 13 C 0.52 4.17 7.18 87.66 0.63 4.80 16 14 O -0.57 -10.46 16.11 15.98 0.26 -10.20 16 15 N -0.69 -0.97 5.11 -440.04 -2.25 -3.22 16 16 C 0.11 0.12 4.32 45.52 0.20 0.31 16 17 H 0.08 0.47 7.46 -2.38 -0.02 0.46 16 18 C -0.18 0.44 7.71 31.12 0.24 0.68 16 19 C 0.09 -0.47 5.27 31.12 0.16 -0.31 16 20 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 21 O -0.57 3.20 12.32 -148.98 -1.84 1.36 16 22 C -0.13 0.56 7.66 31.12 0.24 0.79 16 23 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 24 H 0.08 -0.15 6.91 -2.39 -0.02 -0.17 16 25 H 0.11 -0.73 7.92 -2.38 -0.02 -0.74 16 26 H 0.12 -0.17 6.31 -2.38 -0.02 -0.19 16 27 H 0.16 -0.11 5.43 -2.91 -0.02 -0.13 16 28 H 0.13 0.49 4.87 -2.91 -0.01 0.48 16 29 H 0.09 -0.36 7.96 -2.38 -0.02 -0.38 16 30 H 0.40 -4.21 8.74 -74.06 -0.65 -4.86 16 31 H -0.29 -0.79 7.11 99.48 0.71 -0.09 16 32 H -0.30 -1.50 7.11 99.48 0.71 -0.80 16 33 H 0.15 0.46 8.06 -2.91 -0.02 0.44 16 34 H 0.14 1.03 8.06 -2.91 -0.02 1.00 16 35 H 0.42 -1.30 7.38 -92.70 -0.68 -1.98 16 36 H 0.11 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.07 -0.02 8.14 -2.39 -0.02 -0.03 16 38 H 0.40 -4.97 9.12 -74.05 -0.68 -5.65 16 39 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 40 H 0.13 -0.93 8.14 -2.39 -0.02 -0.94 16 Total: 0.00 -25.36 331.93 -1.98 -27.34 By element: Atomic # 1 Polarization: -14.13 SS G_CDS: -0.87 Total: -15.00 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: 3.26 Total: 5.46 kcal Atomic # 7 Polarization: -0.97 SS G_CDS: -2.25 Total: -3.22 kcal Atomic # 8 Polarization: -10.80 SS G_CDS: -4.16 Total: -14.96 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: 2.04 Total: 0.38 kcal Total: -25.36 -1.98 -27.34 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_10157680.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.266 kcal (2) G-P(sol) polarization free energy of solvation -25.361 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.628 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds