Wall clock time and date at job start Sun Mar 7 2021 21:59:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.35448 * 126.06690 * 120.03029 * 4 2 1 6 6 N 1.35535 * 108.87202 * 179.97438 * 5 4 2 7 7 C 1.37646 * 108.64226 * 359.97438 * 6 5 4 8 8 C 1.46682 * 126.23301 * 180.02562 * 7 6 5 9 9 O 1.21689 * 120.00346 * 179.97438 * 8 7 6 10 10 N 1.34774 * 119.99875 * 359.97287 * 8 7 6 11 11 C 1.46501 * 120.00074 * 179.97438 * 10 8 7 12 12 H 1.08998 * 112.85093 * 334.67064 * 11 10 8 13 13 C 1.53787 * 113.61355 * 105.86819 * 11 10 8 14 14 C 1.54053 * 86.98391 * 89.16052 * 13 11 10 15 15 H 1.09002 * 113.61633 * 139.97482 * 14 13 11 16 16 O 1.42898 * 113.69282 * 270.87294 * 14 13 11 17 17 C 1.53783 * 87.07880 * 25.43252 * 14 13 11 18 18 C 1.37874 * 107.53776 * 359.73817 * 7 6 5 19 19 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 20 20 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 21 21 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 22 22 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 23 23 H 1.08005 * 125.56243 * 0.02562 * 5 4 2 24 24 H 0.96994 * 125.67911 * 180.02562 * 6 5 4 25 25 H 0.96999 * 119.99978 * 0.02562 * 10 8 7 26 26 H 1.08995 * 113.61533 * 203.66561 * 13 11 10 27 27 H 1.09000 * 113.61311 * 334.57043 * 13 11 10 28 28 H 0.96697 * 113.99900 * 277.53141 * 16 14 13 29 29 H 1.09000 * 113.61408 * 220.02135 * 17 14 13 30 30 H 1.09000 * 113.61344 * 89.11919 * 17 14 13 31 31 H 1.07994 * 126.45818 * 180.25595 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.7138 -0.1742 -2.1973 6 7 2.9568 -1.1186 -3.1386 7 6 2.3199 -2.2818 -2.7696 8 6 2.3278 -3.5473 -3.5111 9 8 1.7228 -4.5102 -3.0778 10 7 3.0050 -3.6438 -4.6723 11 6 3.0134 -4.9079 -5.4126 12 1 2.8429 -5.7740 -4.7732 13 6 2.1321 -4.8896 -6.6728 14 6 3.3700 -4.3752 -7.4320 15 1 3.4866 -4.8120 -8.4239 16 8 3.4913 -2.9514 -7.4349 17 6 4.2210 -5.0638 -6.3519 18 6 1.6786 -2.0425 -1.5727 19 1 -0.3934 0.4418 0.7650 20 1 1.7923 -0.5138 0.8901 21 1 1.5616 2.4678 -1.2086 22 1 1.5878 2.4586 1.2241 23 1 3.0843 0.8401 -2.2149 24 1 3.4912 -0.9956 -3.9386 25 1 3.4876 -2.8764 -5.0175 26 1 1.8048 -5.8793 -6.9911 27 1 1.3166 -4.1679 -6.6249 28 1 2.9584 -2.5127 -8.1121 29 1 5.0907 -4.4827 -6.0450 30 1 4.4637 -6.1011 -6.5827 31 1 1.0895 -2.7497 -1.0078 There are 43 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 43 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_10543058.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:24 Heat of formation + Delta-G solvation = -35.322127 kcal Electronic energy + Delta-G solvation = -16928.351899 eV Core-core repulsion = 13985.358680 eV Total energy + Delta-G solvation = -2942.993219 eV No. of doubly occupied orbitals = 43 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 239.099 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -42.39940 -41.07057 -39.25388 -37.69084 -36.16468 -34.01950 -32.48986 -30.60313 -26.90220 -26.75567 -25.57765 -23.68780 -21.17139 -20.77892 -20.56417 -19.66231 -18.41516 -18.32552 -17.16437 -16.94230 -16.38561 -15.94375 -15.79391 -15.39160 -15.00666 -14.73513 -14.59970 -14.34668 -13.88457 -13.73315 -13.58188 -13.26920 -12.79389 -12.51356 -12.42234 -11.88375 -11.60224 -11.05416 -10.84927 -10.39704 -10.09111 -9.81886 -9.20514 -4.94880 0.50571 1.32454 1.60891 1.63961 1.98247 2.04458 2.10369 2.45287 2.88743 3.35340 3.49987 3.59050 3.72867 3.91127 3.99546 4.01522 4.12527 4.35691 4.54576 4.56631 4.66351 4.71031 4.77256 4.87922 4.89994 5.00234 5.15998 5.51743 5.69602 5.88673 6.30738 6.43706 6.57208 6.59859 7.23544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.040 4.040 3 Si 0.679 3.321 4 C -0.166 4.166 5 C 0.037 3.963 6 N -0.534 5.534 7 C -0.058 4.058 8 C 0.592 3.408 9 O -0.527 6.527 10 N -0.708 5.708 11 C 0.126 3.874 12 H 0.106 0.894 13 C -0.185 4.185 14 C 0.077 3.923 15 H 0.073 0.927 16 O -0.556 6.556 17 C -0.141 4.141 18 C -0.075 4.075 19 H 0.377 0.623 20 H 0.073 0.927 21 H -0.255 1.255 22 H -0.262 1.262 23 H 0.176 0.824 24 H 0.420 0.580 25 H 0.401 0.599 26 H 0.101 0.899 27 H 0.077 0.923 28 H 0.386 0.614 29 H 0.083 0.917 30 H 0.111 0.889 31 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.610 2.304 -2.950 5.938 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.151 4.151 3 Si 0.580 3.420 4 C -0.173 4.173 5 C -0.099 4.099 6 N -0.130 5.130 7 C -0.171 4.171 8 C 0.380 3.620 9 O -0.403 6.403 10 N -0.360 5.360 11 C 0.021 3.979 12 H 0.124 0.876 13 C -0.224 4.224 14 C 0.017 3.983 15 H 0.091 0.909 16 O -0.363 6.363 17 C -0.179 4.179 18 C -0.101 4.101 19 H 0.224 0.776 20 H 0.091 0.909 21 H -0.180 1.180 22 H -0.187 1.187 23 H 0.193 0.807 24 H 0.258 0.742 25 H 0.237 0.763 26 H 0.119 0.881 27 H 0.096 0.904 28 H 0.234 0.766 29 H 0.101 0.899 30 H 0.130 0.870 31 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 4.545 1.963 -2.859 5.717 hybrid contribution -1.076 0.463 -0.541 1.291 sum 3.468 2.426 -3.400 5.430 Atomic orbital electron populations 1.86619 1.18239 1.79890 1.49509 1.24054 0.83848 1.09914 0.97246 0.95509 0.91267 0.74703 0.80470 1.18688 1.05349 0.94886 0.98349 1.21763 1.03038 0.94803 0.90330 1.41895 1.40681 1.09728 1.20683 1.20360 1.08815 0.87465 1.00412 1.17062 0.78754 0.86280 0.79953 1.90862 1.43696 1.37396 1.68348 1.45531 1.53331 1.14450 1.22697 1.21758 0.96198 0.87517 0.92457 0.87600 1.24193 0.98125 1.03053 0.97075 1.22865 0.95977 0.81389 0.98040 0.90929 1.86321 1.71176 1.18200 1.60574 1.23454 0.97613 1.01851 0.94976 1.21189 0.99168 0.95781 0.93976 0.77552 0.90886 1.17986 1.18726 0.80665 0.74233 0.76336 0.88085 0.90399 0.76610 0.89877 0.87033 0.83282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.25 12.86 -35.23 -0.45 -1.70 16 2 C -0.04 -0.03 3.01 36.01 0.11 0.08 16 3 Si 0.68 -0.77 30.59 -169.99 -5.20 -5.97 16 4 C -0.17 -0.32 5.47 -105.02 -0.57 -0.90 16 5 C 0.04 -0.02 10.45 -16.91 -0.18 -0.19 16 6 N -0.53 0.38 5.99 -9.39 -0.06 0.32 16 7 C -0.06 -0.16 7.06 -81.98 -0.58 -0.74 16 8 C 0.59 2.29 7.79 -12.85 -0.10 2.19 16 9 O -0.53 -4.06 16.50 5.20 0.09 -3.97 16 10 N -0.71 -0.56 5.14 -54.32 -0.28 -0.84 16 11 C 0.13 0.04 4.30 -67.11 -0.29 -0.25 16 12 H 0.11 0.18 7.50 -51.93 -0.39 -0.21 16 13 C -0.19 0.17 7.73 -25.77 -0.20 -0.03 16 14 C 0.08 -0.16 5.28 -25.77 -0.14 -0.29 16 15 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 16 O -0.56 1.15 12.35 -35.23 -0.44 0.71 16 17 C -0.14 0.26 7.65 -25.92 -0.20 0.06 16 18 C -0.07 -0.29 10.59 -39.12 -0.41 -0.70 16 19 H 0.38 -0.69 8.74 45.56 0.40 -0.29 16 20 H 0.07 -0.05 7.96 -51.92 -0.41 -0.46 16 21 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 22 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 23 H 0.18 -0.64 6.19 -52.48 -0.32 -0.97 16 24 H 0.42 -1.61 8.19 -40.82 -0.33 -1.94 16 25 H 0.40 -0.44 6.76 -40.82 -0.28 -0.71 16 26 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 27 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.39 -2.03 9.12 45.56 0.42 -1.61 16 29 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 31 H 0.15 0.68 8.06 -52.49 -0.42 0.26 16 LS Contribution 270.18 15.07 4.07 4.07 Total: 0.00 -9.55 270.18 -7.48 -17.03 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -2.66 Total: -8.88 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -2.56 Total: -0.77 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.34 Total: -0.52 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.80 Total: -4.96 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.20 Total: -5.97 kcal Total LS contribution 4.07 Total: 4.07 kcal Total: -9.55 -7.48 -17.03 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_10543058.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.290 kcal (2) G-P(sol) polarization free energy of solvation -9.551 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds