Wall clock time and date at job start Sun Mar 7 2021 21:59:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46507 * 1 3 3 C 1.35533 * 125.67470 * 2 1 4 4 C 1.35454 * 108.87061 * 180.13768 * 3 2 1 5 5 C 1.50697 * 126.06882 * 179.86771 * 4 3 2 6 6 O 1.42903 * 109.47167 * 119.68754 * 5 4 3 7 7 Si 1.86302 * 109.47104 * 359.68718 * 5 4 3 8 8 C 1.39840 * 107.86222 * 359.60004 * 4 3 2 9 9 C 1.37643 * 125.68046 * 179.69147 * 2 1 3 10 10 C 1.46684 * 126.23082 * 0.02562 * 9 2 1 11 11 O 1.21692 * 120.00064 * 354.26616 * 10 9 2 12 12 N 1.34774 * 119.99856 * 174.27457 * 10 9 2 13 13 C 1.46499 * 120.00060 * 185.09147 * 12 10 9 14 14 H 1.08998 * 112.85140 * 334.66210 * 13 12 10 15 15 C 1.53782 * 113.61721 * 105.86032 * 13 12 10 16 16 C 1.54048 * 86.98451 * 89.16439 * 15 13 12 17 17 H 1.09002 * 113.62063 * 139.98374 * 16 15 13 18 18 O 1.42904 * 113.61341 * 270.88630 * 16 15 13 19 19 C 1.53782 * 87.08230 * 25.43151 * 16 15 13 20 20 H 1.08995 * 109.47134 * 274.19977 * 1 2 3 21 21 H 1.08999 * 109.47093 * 34.20588 * 1 2 3 22 22 H 1.09000 * 109.46778 * 154.20447 * 1 2 3 23 23 H 1.07999 * 125.56768 * 0.02562 * 3 2 1 24 24 H 1.08994 * 109.47256 * 239.68516 * 5 4 3 25 25 H 0.96702 * 113.99934 * 299.99478 * 6 5 4 26 26 H 1.48506 * 110.00004 * 180.02562 * 7 5 4 27 27 H 1.48503 * 109.99958 * 301.31745 * 7 5 4 28 28 H 1.07997 * 126.45491 * 180.23991 * 8 4 3 29 29 H 0.97000 * 119.99957 * 5.08970 * 12 10 9 30 30 H 1.08996 * 113.61294 * 203.66507 * 15 13 12 31 31 H 1.09001 * 113.61171 * 334.56884 * 15 13 12 32 32 H 0.96699 * 114.00132 * 277.49406 * 18 16 15 33 33 H 1.08999 * 113.61763 * 220.02444 * 19 16 15 34 34 H 1.08996 * 113.60940 * 89.11711 * 19 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2555 1.1010 0.0000 4 6 3.5522 0.7094 -0.0031 5 6 4.7537 1.6190 -0.0070 6 8 5.5393 1.3754 1.1616 7 14 4.1886 3.3942 -0.0165 8 6 3.5780 -0.6887 0.0042 9 6 2.2679 -1.1180 0.0060 10 6 1.8125 -2.5124 0.0130 11 8 0.6267 -2.7646 0.1192 12 7 2.7073 -3.5141 -0.0980 13 6 2.2455 -4.9004 -0.2033 14 1 1.2631 -5.0544 0.2430 15 6 2.3783 -5.4882 -1.6182 16 6 3.7953 -5.9350 -1.2115 17 1 4.0638 -6.9250 -1.5802 18 8 4.8013 -4.9535 -1.4701 19 6 3.2933 -5.9343 0.2421 20 1 -0.3633 0.0753 1.0249 21 1 -0.3633 0.8499 -0.5777 22 1 -0.3633 -0.9253 -0.4472 23 1 1.9082 2.1236 0.0004 24 1 5.3541 1.4240 -0.8955 25 1 5.0677 1.5293 1.9917 26 1 5.3643 4.3015 -0.0210 27 1 3.3442 3.6520 -1.2106 28 1 4.4584 -1.3143 0.0076 29 1 3.6570 -3.3171 -0.1081 30 1 1.6979 -6.3173 -1.8121 31 1 2.3657 -4.7355 -2.4066 32 1 5.1212 -4.9491 -2.3826 33 1 4.0188 -5.5416 0.9545 34 1 2.8626 -6.8851 0.5556 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_10803934.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:27 Heat of formation + Delta-G solvation = -34.901624 kcal Electronic energy + Delta-G solvation = -18966.597892 eV Core-core repulsion = 15868.085289 eV Total energy + Delta-G solvation = -3098.512603 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.59242 -41.08210 -39.37704 -37.66715 -36.08806 -34.42022 -33.54425 -30.81269 -28.33362 -26.78883 -26.06431 -25.41606 -23.56436 -21.31913 -20.82114 -20.31682 -18.97186 -18.20408 -17.69712 -17.03950 -16.82141 -16.71958 -16.15044 -15.85381 -15.55616 -15.38553 -15.14633 -14.85458 -14.41283 -14.08802 -13.70519 -13.55780 -13.48533 -13.28134 -13.13746 -12.69129 -12.33927 -12.25926 -11.93285 -11.48399 -11.19330 -10.70667 -10.33525 -10.16965 -9.71252 -9.28386 -4.93565 0.35762 1.40059 1.51529 1.55083 1.73450 2.04430 2.22121 2.28645 3.11565 3.46383 3.58747 3.67723 3.78741 3.82402 3.82996 4.01879 4.13779 4.22785 4.35814 4.38330 4.65699 4.65999 4.70301 4.71200 4.76228 4.80412 4.85921 4.95406 5.01599 5.16780 5.49300 5.65491 5.84744 6.15205 6.43665 6.83431 6.89541 7.07293 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.411 5.411 3 C 0.036 3.964 4 C -0.219 4.219 5 C -0.040 4.040 6 O -0.561 6.561 7 Si 0.783 3.217 8 C -0.112 4.112 9 C -0.080 4.080 10 C 0.586 3.414 11 O -0.585 6.585 12 N -0.686 5.686 13 C 0.111 3.889 14 H 0.088 0.912 15 C -0.181 4.181 16 C 0.082 3.918 17 H 0.091 0.909 18 O -0.569 6.569 19 C -0.135 4.135 20 H 0.088 0.912 21 H 0.112 0.888 22 H 0.082 0.918 23 H 0.204 0.796 24 H 0.100 0.900 25 H 0.393 0.607 26 H -0.303 1.303 27 H -0.280 1.280 28 H 0.149 0.851 29 H 0.415 0.585 30 H 0.113 0.887 31 H 0.063 0.937 32 H 0.398 0.602 33 H 0.077 0.923 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.630 -0.358 0.077 0.729 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.083 5.083 3 C -0.101 4.101 4 C -0.225 4.225 5 C -0.150 4.150 6 O -0.368 6.368 7 Si 0.688 3.312 8 C -0.139 4.139 9 C -0.192 4.192 10 C 0.375 3.625 11 O -0.467 6.467 12 N -0.337 5.337 13 C 0.006 3.994 14 H 0.106 0.894 15 C -0.220 4.220 16 C 0.023 3.977 17 H 0.109 0.891 18 O -0.377 6.377 19 C -0.173 4.173 20 H 0.106 0.894 21 H 0.130 0.870 22 H 0.101 0.899 23 H 0.220 0.780 24 H 0.117 0.883 25 H 0.242 0.758 26 H -0.231 1.231 27 H -0.207 1.207 28 H 0.167 0.833 29 H 0.253 0.747 30 H 0.131 0.869 31 H 0.082 0.918 32 H 0.249 0.751 33 H 0.096 0.904 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -1.513 0.136 -0.108 1.523 hybrid contribution 0.641 -0.623 -1.035 1.368 sum -0.872 -0.487 -1.143 1.518 Atomic orbital electron populations 1.22448 0.74745 1.05740 1.04978 1.44028 1.07681 1.04688 1.51931 1.22343 0.89651 0.92534 1.05563 1.19921 0.94379 0.94537 1.13696 1.24535 0.91561 1.08511 0.90400 1.86441 1.41554 1.92406 1.16425 0.93913 0.79734 0.71825 0.85692 1.21361 0.94150 0.95362 1.03003 1.20022 0.90987 0.87546 1.20692 1.17240 0.85312 0.84384 0.75558 1.90755 1.17669 1.85387 1.52912 1.45296 1.10201 1.05215 1.72981 1.21943 0.99014 0.80442 0.98013 0.89361 1.24198 0.99411 1.01743 0.96637 1.22848 0.86506 0.91947 0.96389 0.89118 1.86337 1.56832 1.58538 1.36003 1.23494 0.97304 1.00086 0.96428 0.89362 0.86973 0.89887 0.77976 0.88272 0.75762 1.23116 1.20699 0.83344 0.74749 0.86895 0.91800 0.75091 0.90395 0.85196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.01 10.64 127.77 1.36 1.35 16 2 N -0.41 -1.41 3.16 -534.31 -1.69 -3.10 16 3 C 0.04 -0.02 9.94 83.48 0.83 0.81 16 4 C -0.22 -0.40 5.44 -20.12 -0.11 -0.51 16 5 C -0.04 -0.02 3.02 71.24 0.22 0.20 16 6 O -0.56 -0.90 12.88 -148.98 -1.92 -2.82 16 7 Si 0.78 -2.21 30.59 68.60 2.10 -0.11 16 8 C -0.11 -0.50 10.29 22.57 0.23 -0.27 16 9 C -0.08 -0.54 6.88 40.35 0.28 -0.26 16 10 C 0.59 5.46 7.77 86.45 0.67 6.13 16 11 O -0.58 -8.62 14.26 -4.32 -0.06 -8.69 16 12 N -0.69 -3.14 5.12 -443.99 -2.27 -5.42 16 13 C 0.11 0.25 4.33 45.52 0.20 0.45 16 14 H 0.09 0.48 7.45 -2.39 -0.02 0.46 16 15 C -0.18 0.21 7.73 31.21 0.24 0.45 16 16 C 0.08 -0.29 5.28 31.21 0.16 -0.12 16 17 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 18 O -0.57 1.18 12.34 -148.98 -1.84 -0.66 16 19 C -0.14 0.34 7.65 31.12 0.24 0.58 16 20 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 21 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 22 H 0.08 0.40 6.23 -2.39 -0.01 0.39 16 23 H 0.20 -1.54 6.19 -2.91 -0.02 -1.56 16 24 H 0.10 0.21 7.96 -2.39 -0.02 0.19 16 25 H 0.39 -2.43 8.70 -74.06 -0.64 -3.08 16 26 H -0.30 -1.57 7.11 99.48 0.71 -0.87 16 27 H -0.28 -0.28 7.11 99.48 0.71 0.43 16 28 H 0.15 0.41 7.45 -2.91 -0.02 0.39 16 29 H 0.41 1.09 6.53 -92.71 -0.61 0.48 16 30 H 0.11 -0.45 8.14 -2.39 -0.02 -0.47 16 31 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 32 H 0.40 -3.53 9.12 -74.06 -0.68 -4.20 16 33 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 Total: 0.00 -20.13 288.16 -2.11 -22.24 By element: Atomic # 1 Polarization: -9.51 SS G_CDS: -0.74 Total: -10.25 kcal Atomic # 6 Polarization: 4.49 SS G_CDS: 4.32 Total: 8.81 kcal Atomic # 7 Polarization: -4.55 SS G_CDS: -3.96 Total: -8.52 kcal Atomic # 8 Polarization: -8.35 SS G_CDS: -3.82 Total: -12.17 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: 2.10 Total: -0.11 kcal Total: -20.13 -2.11 -22.24 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_10803934.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.663 kcal (2) G-P(sol) polarization free energy of solvation -20.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.795 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds