Wall clock time and date at job start Sun Mar 7 2021 21:59:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37644 * 125.68292 * 2 1 4 4 C 1.46686 * 126.23178 * 359.97438 * 3 2 1 5 5 O 1.21695 * 119.99700 * 354.94486 * 4 3 2 6 6 N 1.34772 * 119.99891 * 174.67728 * 4 3 2 7 7 C 1.46504 * 119.99933 * 185.09741 * 6 4 3 8 8 H 1.09000 * 112.84989 * 25.32812 * 7 6 4 9 9 C 1.53780 * 113.61374 * 156.52714 * 7 6 4 10 10 C 1.53784 * 87.07801 * 139.97957 * 9 7 6 11 11 H 1.09003 * 113.61218 * 89.12000 * 10 9 7 12 12 O 1.42898 * 113.61287 * 219.93054 * 10 9 7 13 13 C 1.53781 * 113.61200 * 254.13695 * 7 6 4 14 14 C 1.37873 * 107.53566 * 180.24384 * 3 2 1 15 15 C 1.39833 * 107.08552 * 359.62258 * 14 3 2 16 16 C 1.35450 * 107.86076 * 0.38220 * 15 14 3 17 17 C 1.50700 * 125.56152 * 179.75953 * 16 15 14 18 18 O 1.42904 * 109.47338 * 149.99665 * 17 16 15 19 19 Si 1.86308 * 109.47100 * 30.00292 * 17 16 15 20 20 H 1.08990 * 109.47559 * 95.81749 * 1 2 3 21 21 H 1.08999 * 109.47365 * 215.82432 * 1 2 3 22 22 H 1.09008 * 109.46320 * 335.81532 * 1 2 3 23 23 H 0.97001 * 120.00014 * 5.09525 * 6 4 3 24 24 H 1.09001 * 113.61366 * 254.52748 * 9 7 6 25 25 H 1.08997 * 113.61514 * 25.43279 * 9 7 6 26 26 H 0.96705 * 114.00210 * 180.02562 * 12 10 9 27 27 H 1.09001 * 113.61844 * 334.56189 * 13 7 6 28 28 H 1.08999 * 113.61986 * 105.47161 * 13 7 6 29 29 H 1.08007 * 126.45450 * 179.75747 * 14 3 2 30 30 H 1.07998 * 126.06808 * 180.14543 * 15 14 3 31 31 H 1.08996 * 109.47771 * 270.00339 * 17 16 15 32 32 H 0.96700 * 114.00034 * 179.97438 * 18 17 16 33 33 H 1.48499 * 110.00155 * 59.99802 * 19 17 16 34 34 H 1.48496 * 109.99909 * 181.32027 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1180 0.0000 4 6 1.8125 2.5124 -0.0005 5 8 0.6257 2.7648 -0.0939 6 7 2.7080 3.5138 0.1078 7 6 2.2470 4.8998 0.2198 8 1 1.2427 4.9796 0.6358 9 6 3.2671 5.8362 0.8887 10 6 2.8635 6.8921 -0.1540 11 1 2.0274 7.5175 0.1590 12 8 3.9654 7.6500 -0.6572 13 6 2.4488 5.7217 -1.0642 14 6 3.5780 0.6886 -0.0056 15 6 3.5521 -0.7095 -0.0002 16 6 2.2555 -1.1010 -0.0001 17 6 1.7708 -2.5279 -0.0003 18 8 0.5128 -2.6038 0.6735 19 14 3.0114 -3.6053 0.8779 20 1 -0.3634 -0.1042 -1.0223 21 1 -0.3634 -0.8332 0.6015 22 1 -0.3632 0.9376 0.4211 23 1 3.6578 3.3167 0.1117 24 1 3.0044 6.1092 1.9108 25 1 4.2989 5.4987 0.7915 26 1 3.7179 8.3160 -1.3132 27 1 3.2566 5.3529 -1.6964 28 1 1.5266 5.9025 -1.6165 29 1 4.4584 1.3142 -0.0108 30 1 4.4132 -1.3613 -0.0002 31 1 1.6539 -2.8719 -1.0279 32 1 0.1400 -3.4953 0.7112 33 1 3.1798 -3.1467 2.2802 34 1 2.5605 -5.0200 0.8568 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_10803936.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:30 Heat of formation + Delta-G solvation = -37.905524 kcal Electronic energy + Delta-G solvation = -18710.465801 eV Core-core repulsion = 15611.822939 eV Total energy + Delta-G solvation = -3098.642862 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 253.115 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -42.58038 -40.96390 -39.41365 -37.88281 -36.41198 -34.44988 -33.53051 -31.40934 -27.55403 -27.19721 -26.80069 -24.86134 -23.00500 -21.46355 -21.14398 -20.17632 -18.82815 -18.69935 -18.44071 -17.23718 -16.86961 -16.64412 -16.25310 -16.02531 -15.54129 -15.38590 -14.68970 -14.57554 -14.44425 -14.00298 -13.72026 -13.64933 -13.51870 -13.22093 -13.04750 -12.72361 -12.58090 -12.32515 -12.09594 -11.73867 -11.20401 -10.84245 -10.74836 -10.20031 -9.75544 -9.07371 -4.87207 0.33246 1.16065 1.57942 1.68827 1.74739 2.02993 2.27614 2.32632 3.08013 3.31704 3.41301 3.59431 3.65058 3.74103 3.79494 3.94531 3.98460 4.28778 4.36327 4.38899 4.45558 4.56021 4.69879 4.72522 4.75521 4.91629 4.94112 5.06140 5.10072 5.16393 5.43621 5.75643 5.98795 6.13259 6.42758 6.50388 6.85738 7.06645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.407 5.407 3 C -0.092 4.092 4 C 0.587 3.413 5 O -0.588 6.588 6 N -0.693 5.693 7 C 0.123 3.877 8 H 0.104 0.896 9 C -0.130 4.130 10 C 0.082 3.918 11 H 0.100 0.900 12 O -0.575 6.575 13 C -0.179 4.179 14 C -0.124 4.124 15 C -0.206 4.206 16 C 0.044 3.956 17 C -0.070 4.070 18 O -0.561 6.561 19 Si 0.810 3.190 20 H 0.071 0.929 21 H 0.109 0.891 22 H 0.080 0.920 23 H 0.417 0.583 24 H 0.091 0.909 25 H 0.101 0.899 26 H 0.397 0.603 27 H 0.092 0.908 28 H 0.070 0.930 29 H 0.177 0.823 30 H 0.187 0.813 31 H 0.102 0.898 32 H 0.400 0.600 33 H -0.308 1.308 34 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.042 -1.758 -1.743 4.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.080 5.080 3 C -0.204 4.204 4 C 0.377 3.623 5 O -0.471 6.471 6 N -0.344 5.344 7 C 0.018 3.982 8 H 0.122 0.878 9 C -0.168 4.168 10 C 0.023 3.977 11 H 0.118 0.882 12 O -0.383 6.383 13 C -0.218 4.218 14 C -0.150 4.150 15 C -0.229 4.229 16 C -0.074 4.074 17 C -0.177 4.177 18 O -0.372 6.372 19 Si 0.713 3.287 20 H 0.090 0.910 21 H 0.127 0.873 22 H 0.099 0.901 23 H 0.255 0.745 24 H 0.109 0.891 25 H 0.120 0.880 26 H 0.247 0.753 27 H 0.110 0.890 28 H 0.089 0.911 29 H 0.195 0.805 30 H 0.204 0.796 31 H 0.119 0.881 32 H 0.252 0.748 33 H -0.236 1.236 34 H -0.205 1.205 Dipole moment (debyes) X Y Z Total from point charges 3.358 -1.818 -0.681 3.879 hybrid contribution -1.610 0.046 -0.312 1.641 sum 1.748 -1.772 -0.993 2.679 Atomic orbital electron populations 1.22391 0.76093 1.05211 1.03814 1.43913 1.07195 1.04753 1.52175 1.20240 0.91716 0.87240 1.21247 1.17268 0.85330 0.84415 0.75334 1.90759 1.18054 1.85440 1.52812 1.45461 1.10096 1.05300 1.73562 1.22244 0.99374 0.78809 0.97815 0.87817 1.23436 1.00176 0.93856 0.99301 1.23141 0.89627 0.90514 0.94428 0.88200 1.86469 1.34653 1.54371 1.62837 1.24192 1.02509 0.97385 0.97691 1.21721 0.94256 0.95800 1.03221 1.20972 0.95107 0.95612 1.11186 1.20614 0.91267 0.87621 1.07937 1.24940 0.93489 0.96031 1.03212 1.86440 1.34993 1.36104 1.79682 0.93415 0.83846 0.73324 0.78113 0.91023 0.87305 0.90132 0.74474 0.89062 0.88034 0.75302 0.88970 0.91080 0.80521 0.79561 0.88071 0.74795 1.23563 1.20543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.52 10.22 127.77 1.31 1.83 16 2 N -0.41 -3.44 3.16 -519.71 -1.64 -5.08 16 3 C -0.09 -0.69 6.89 40.35 0.28 -0.41 16 4 C 0.59 5.35 7.77 86.45 0.67 6.03 16 5 O -0.59 -9.49 14.27 -4.33 -0.06 -9.55 16 6 N -0.69 -1.34 5.35 -443.99 -2.37 -3.71 16 7 C 0.12 0.14 4.18 45.52 0.19 0.33 16 8 H 0.10 0.44 7.56 -2.39 -0.02 0.43 16 9 C -0.13 0.28 7.66 31.12 0.24 0.52 16 10 C 0.08 -0.16 5.21 31.18 0.16 0.00 16 11 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 12 O -0.58 0.13 13.68 -148.98 -2.04 -1.91 16 13 C -0.18 0.03 7.73 31.18 0.24 0.27 16 14 C -0.12 -0.15 10.35 22.57 0.23 0.08 16 15 C -0.21 -0.01 9.37 22.01 0.21 0.19 16 16 C 0.04 0.17 6.18 41.34 0.26 0.42 16 17 C -0.07 0.11 2.98 71.24 0.21 0.32 16 18 O -0.56 -0.06 9.81 -148.98 -1.46 -1.52 16 19 Si 0.81 -3.28 31.10 68.60 2.13 -1.14 16 20 H 0.07 0.48 8.14 -2.39 -0.02 0.46 16 21 H 0.11 0.68 5.49 -2.39 -0.01 0.66 16 22 H 0.08 0.93 6.11 -2.38 -0.01 0.92 16 23 H 0.42 -1.52 7.62 -92.71 -0.71 -2.23 16 24 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 25 H 0.10 -0.28 8.11 -2.39 -0.02 -0.30 16 26 H 0.40 -3.13 9.12 -74.05 -0.68 -3.81 16 27 H 0.09 0.04 8.14 -2.39 -0.02 0.02 16 28 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 29 H 0.18 -1.07 7.45 -2.91 -0.02 -1.09 16 30 H 0.19 -1.43 6.85 -2.91 -0.02 -1.45 16 31 H 0.10 -0.55 7.96 -2.39 -0.02 -0.57 16 32 H 0.40 -3.33 8.74 -74.06 -0.65 -3.98 16 33 H -0.31 -1.63 7.11 99.48 0.71 -0.92 16 34 H -0.28 0.23 7.11 99.48 0.71 0.94 16 Total: 0.00 -22.75 285.83 -2.29 -25.03 By element: Atomic # 1 Polarization: -10.85 SS G_CDS: -0.84 Total: -11.69 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 3.99 Total: 9.57 kcal Atomic # 7 Polarization: -4.77 SS G_CDS: -4.02 Total: -8.79 kcal Atomic # 8 Polarization: -9.42 SS G_CDS: -3.56 Total: -12.98 kcal Atomic # 14 Polarization: -3.28 SS G_CDS: 2.13 Total: -1.14 kcal Total: -22.75 -2.29 -25.03 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_10803936.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.872 kcal (2) G-P(sol) polarization free energy of solvation -22.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.287 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.033 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.906 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds