Wall clock time and date at job start Sun Mar 7 2021 21:59:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47141 * 2 1 4 4 C 1.50709 * 109.46750 * 240.00195 * 2 1 3 5 5 C 1.36447 * 120.29026 * 239.99829 * 4 2 1 6 6 C 1.40093 * 119.25198 * 179.74892 * 5 4 2 7 7 C 1.40852 * 132.86674 * 180.25311 * 6 5 4 8 8 C 1.46563 * 126.58203 * 359.96757 * 7 6 5 9 9 O 1.21723 * 120.00060 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00369 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00096 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85042 * 334.66219 * 11 10 8 13 13 C 1.53776 * 113.61489 * 105.86230 * 11 10 8 14 14 C 1.54055 * 86.98767 * 89.16156 * 13 11 10 15 15 H 1.08997 * 113.61969 * 139.97537 * 14 13 11 16 16 O 1.42898 * 113.68757 * 270.87231 * 14 13 11 17 17 C 1.53781 * 113.61277 * 203.47140 * 11 10 8 18 18 C 1.40560 * 106.84022 * 180.02562 * 7 6 5 19 19 N 1.30739 * 108.74445 * 0.02562 * 18 7 6 20 20 N 1.36579 * 120.23015 * 0.25716 * 6 5 4 21 21 C 1.36243 * 120.07969 * 359.97438 * 20 6 5 22 22 C 1.35184 * 120.70506 * 359.97438 * 21 20 6 23 23 H 0.96702 * 113.99973 * 59.99785 * 1 2 3 24 24 H 1.08995 * 109.47160 * 120.00123 * 2 1 3 25 25 H 1.48493 * 110.00277 * 60.00146 * 3 2 1 26 26 H 1.48504 * 110.00034 * 181.32489 * 3 2 1 27 27 H 1.08002 * 120.37857 * 0.03132 * 5 4 2 28 28 H 0.97005 * 119.99502 * 0.02562 * 10 8 7 29 29 H 1.09003 * 113.61684 * 203.66282 * 13 11 10 30 30 H 1.09001 * 113.61575 * 334.56803 * 13 11 10 31 31 H 0.96695 * 114.00769 * 277.53320 * 16 14 13 32 32 H 1.09002 * 113.61672 * 25.42766 * 17 11 10 33 33 H 1.09003 * 113.61780 * 156.25039 * 17 11 10 34 34 H 1.08004 * 125.62931 * 179.97438 * 18 7 6 35 35 H 1.07995 * 119.64905 * 179.97438 * 21 20 6 36 36 H 1.08007 * 119.84081 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7161 -1.8203 -1.1124 6 6 3.1666 -2.4668 -2.2707 7 6 3.9657 -3.6072 -2.4824 8 6 4.5651 -4.4576 -1.4501 9 8 4.3897 -4.2015 -0.2731 10 7 5.3114 -5.5226 -1.8040 11 6 5.9101 -6.3729 -0.7721 12 1 6.0687 -5.8476 0.1697 13 6 5.2076 -7.7312 -0.6093 14 6 6.1713 -8.2669 -1.6852 15 1 6.5403 -9.2717 -1.4797 16 8 5.6824 -8.1174 -3.0196 17 6 7.1427 -7.1544 -1.2567 18 6 4.0790 -3.7725 -3.8736 19 7 3.4097 -2.8183 -4.4660 20 7 2.8266 -1.9858 -3.5030 21 6 2.0465 -0.8741 -3.6107 22 6 1.5996 -0.2348 -2.5065 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 0.8899 25 1 1.5616 2.4679 1.2084 26 1 3.5347 1.7702 -0.0323 27 1 2.9833 -2.1990 -0.1368 28 1 5.4521 -5.7261 -2.7420 29 1 5.3536 -8.1834 0.3717 30 1 4.1634 -7.7229 -0.9216 31 1 5.0709 -8.8140 -3.2949 32 1 7.6596 -6.6807 -2.0914 33 1 7.8176 -7.4479 -0.4526 34 1 4.6289 -4.5577 -4.3712 35 1 1.7822 -0.4995 -4.5885 36 1 0.9815 0.6451 -2.6081 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_11618758.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:34 Heat of formation + Delta-G solvation = 23.703593 kcal Electronic energy + Delta-G solvation = -22736.936431 eV Core-core repulsion = 19190.860808 eV Total energy + Delta-G solvation = -3546.075623 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.110 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -43.26426 -41.09130 -39.54757 -39.04630 -37.24627 -36.02087 -34.22724 -33.63118 -32.06480 -30.25862 -27.37506 -26.79857 -25.71449 -24.77405 -23.54036 -23.00825 -21.25327 -20.51788 -19.19904 -18.56710 -18.24739 -17.87831 -17.42242 -16.94370 -16.78983 -16.51606 -16.24899 -15.82208 -15.48523 -15.35149 -15.30675 -14.72453 -14.54093 -14.20072 -14.00417 -13.64407 -13.57153 -13.49022 -13.14889 -12.66634 -12.40664 -12.31614 -12.15257 -11.92340 -11.53036 -11.45308 -10.79811 -10.77517 -10.68359 -10.30878 -9.88871 -8.73819 -5.17812 -0.53861 -0.12823 1.03297 1.09830 1.15073 1.58276 1.88206 2.08151 2.28903 2.63643 2.98074 3.10283 3.19625 3.35761 3.46370 3.47012 3.67177 3.72126 3.84846 3.87284 4.02266 4.09359 4.16183 4.25740 4.39481 4.51749 4.63061 4.67250 4.73289 4.80387 4.91600 4.98371 5.03682 5.09111 5.18485 5.30175 5.66796 5.73174 6.34621 6.38413 6.55654 6.77133 7.48455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.532 6.532 2 C -0.068 4.068 3 Si 0.699 3.301 4 C -0.069 4.069 5 C -0.096 4.096 6 C 0.169 3.831 7 C -0.315 4.315 8 C 0.602 3.398 9 O -0.553 6.553 10 N -0.704 5.704 11 C 0.129 3.871 12 H 0.103 0.897 13 C -0.186 4.186 14 C 0.077 3.923 15 H 0.071 0.929 16 O -0.554 6.554 17 C -0.142 4.142 18 C 0.122 3.878 19 N -0.313 5.313 20 N -0.267 5.267 21 C 0.122 3.878 22 C -0.158 4.158 23 H 0.378 0.622 24 H 0.123 0.877 25 H -0.247 1.247 26 H -0.254 1.254 27 H 0.161 0.839 28 H 0.405 0.595 29 H 0.098 0.902 30 H 0.077 0.923 31 H 0.385 0.615 32 H 0.083 0.917 33 H 0.109 0.891 34 H 0.200 0.800 35 H 0.179 0.821 36 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.754 0.660 -3.158 3.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.178 4.178 3 Si 0.598 3.402 4 C -0.075 4.075 5 C -0.115 4.115 6 C 0.048 3.952 7 C -0.330 4.330 8 C 0.391 3.609 9 O -0.432 6.432 10 N -0.356 5.356 11 C 0.024 3.976 12 H 0.121 0.879 13 C -0.225 4.225 14 C 0.018 3.982 15 H 0.089 0.911 16 O -0.360 6.360 17 C -0.180 4.180 18 C -0.059 4.059 19 N -0.133 5.133 20 N -0.031 5.031 21 C -0.004 4.004 22 C -0.179 4.179 23 H 0.226 0.774 24 H 0.140 0.860 25 H -0.171 1.171 26 H -0.179 1.179 27 H 0.178 0.822 28 H 0.241 0.759 29 H 0.117 0.883 30 H 0.096 0.904 31 H 0.233 0.767 32 H 0.102 0.898 33 H 0.127 0.873 34 H 0.216 0.784 35 H 0.196 0.804 36 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -0.208 2.060 -2.564 3.295 hybrid contribution 0.066 -1.751 0.328 1.782 sum -0.142 0.309 -2.236 2.262 Atomic orbital electron populations 1.86609 1.16337 1.81663 1.49082 1.25166 0.85569 1.10335 0.96730 0.95009 0.81492 0.75989 0.87723 1.20496 0.96016 0.95035 0.95915 1.20704 0.98239 0.94491 0.98106 1.19259 0.95658 0.94101 0.86211 1.19618 1.16226 1.03503 0.93617 1.16852 0.77400 0.79386 0.87273 1.90773 1.61496 1.72373 1.18597 1.45356 1.52404 1.27744 1.10061 1.21686 0.93034 0.90416 0.92512 0.87916 1.24192 1.00513 0.97474 1.00334 1.22838 0.94967 0.98132 0.82253 0.91118 1.86346 1.66436 1.54182 1.29039 1.23451 0.96420 0.96143 1.02018 1.24105 0.94154 0.95663 0.91974 1.77641 1.18749 1.06269 1.10655 1.46107 1.32294 1.18945 1.05774 1.21594 0.91888 0.85001 1.01912 1.20709 1.04310 1.02654 0.90231 0.77416 0.86012 1.17077 1.17870 0.82176 0.75877 0.88342 0.90424 0.76695 0.89840 0.87259 0.78390 0.80359 0.81595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.46 12.88 -35.23 -0.45 0.01 16 2 C -0.07 0.07 2.84 36.01 0.10 0.17 16 3 Si 0.70 -1.43 31.95 -169.99 -5.43 -6.86 16 4 C -0.07 0.02 4.53 -104.54 -0.47 -0.45 16 5 C -0.10 -0.25 9.35 -39.53 -0.37 -0.62 16 6 C 0.17 0.62 6.76 -84.07 -0.57 0.05 16 7 C -0.31 -1.16 6.17 -104.68 -0.65 -1.81 16 8 C 0.60 2.71 7.78 -12.90 -0.10 2.61 16 9 O -0.55 -4.17 15.32 5.17 0.08 -4.10 16 10 N -0.70 -1.21 5.13 -54.36 -0.28 -1.49 16 11 C 0.13 0.13 4.30 -67.12 -0.29 -0.16 16 12 H 0.10 0.25 7.50 -51.93 -0.39 -0.14 16 13 C -0.19 0.06 7.73 -25.78 -0.20 -0.14 16 14 C 0.08 -0.11 5.28 -25.77 -0.14 -0.24 16 15 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 16 O -0.55 0.69 12.35 -35.23 -0.44 0.25 16 17 C -0.14 0.15 7.65 -25.92 -0.20 -0.05 16 18 C 0.12 0.22 11.44 -17.14 -0.20 0.03 16 19 N -0.31 -1.00 12.57 30.75 0.39 -0.61 16 20 N -0.27 -0.64 3.86 -10.55 -0.04 -0.68 16 21 C 0.12 -0.16 11.17 -16.68 -0.19 -0.35 16 22 C -0.16 0.47 8.38 -39.95 -0.33 0.13 16 23 H 0.38 -2.13 8.10 45.56 0.37 -1.76 16 24 H 0.12 -0.02 7.71 -51.93 -0.40 -0.42 16 25 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 26 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 27 H 0.16 0.54 7.01 -52.49 -0.37 0.17 16 28 H 0.41 0.05 6.55 -40.82 -0.27 -0.22 16 29 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 31 H 0.38 -1.76 9.12 45.56 0.42 -1.34 16 32 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.20 -0.36 7.46 -52.48 -0.39 -0.75 16 35 H 0.18 -0.79 8.06 -52.49 -0.42 -1.21 16 36 H 0.17 -1.27 7.31 -52.48 -0.38 -1.65 16 LS Contribution 311.18 15.07 4.69 4.69 Total: 0.00 -11.19 311.18 -8.23 -19.42 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -3.15 Total: -9.81 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -3.59 Total: -0.81 kcal Atomic # 7 Polarization: -2.85 SS G_CDS: 0.07 Total: -2.78 kcal Atomic # 8 Polarization: -3.03 SS G_CDS: -0.81 Total: -3.84 kcal Atomic # 14 Polarization: -1.43 SS G_CDS: -5.43 Total: -6.86 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -11.19 -8.23 -19.42 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_11618758.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.120 kcal (2) G-P(sol) polarization free energy of solvation -11.189 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 31.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.416 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.704 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds