Wall clock time and date at job start Sun Mar 7 2021 21:59:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47141 * 2 1 4 4 C 1.50709 * 109.46750 * 240.00195 * 2 1 3 5 5 C 1.36447 * 120.29026 * 239.99829 * 4 2 1 6 6 C 1.40093 * 119.25198 * 179.74892 * 5 4 2 7 7 C 1.40852 * 132.86674 * 180.25311 * 6 5 4 8 8 C 1.46563 * 126.58203 * 359.96757 * 7 6 5 9 9 O 1.21723 * 120.00060 * 359.97438 * 8 7 6 10 10 N 1.34778 * 120.00369 * 180.02562 * 8 7 6 11 11 C 1.46496 * 120.00096 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85042 * 334.66219 * 11 10 8 13 13 C 1.53776 * 113.61489 * 105.86230 * 11 10 8 14 14 C 1.54055 * 86.98767 * 89.16156 * 13 11 10 15 15 H 1.08997 * 113.61969 * 139.97537 * 14 13 11 16 16 O 1.42898 * 113.68757 * 270.87231 * 14 13 11 17 17 C 1.53781 * 113.61277 * 203.47140 * 11 10 8 18 18 C 1.40560 * 106.84022 * 180.02562 * 7 6 5 19 19 N 1.30739 * 108.74445 * 0.02562 * 18 7 6 20 20 N 1.36579 * 120.23015 * 0.25716 * 6 5 4 21 21 C 1.36243 * 120.07969 * 359.97438 * 20 6 5 22 22 C 1.35184 * 120.70506 * 359.97438 * 21 20 6 23 23 H 0.96702 * 113.99973 * 59.99785 * 1 2 3 24 24 H 1.08995 * 109.47160 * 120.00123 * 2 1 3 25 25 H 1.48493 * 110.00277 * 60.00146 * 3 2 1 26 26 H 1.48504 * 110.00034 * 181.32489 * 3 2 1 27 27 H 1.08002 * 120.37857 * 0.03132 * 5 4 2 28 28 H 0.97005 * 119.99502 * 0.02562 * 10 8 7 29 29 H 1.09003 * 113.61684 * 203.66282 * 13 11 10 30 30 H 1.09001 * 113.61575 * 334.56803 * 13 11 10 31 31 H 0.96695 * 114.00769 * 277.53320 * 16 14 13 32 32 H 1.09002 * 113.61672 * 25.42766 * 17 11 10 33 33 H 1.09003 * 113.61780 * 156.25039 * 17 11 10 34 34 H 1.08004 * 125.62931 * 179.97438 * 18 7 6 35 35 H 1.07995 * 119.64905 * 179.97438 * 21 20 6 36 36 H 1.08007 * 119.84081 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.7161 -1.8203 -1.1124 6 6 3.1666 -2.4668 -2.2707 7 6 3.9657 -3.6072 -2.4824 8 6 4.5651 -4.4576 -1.4501 9 8 4.3897 -4.2015 -0.2731 10 7 5.3114 -5.5226 -1.8040 11 6 5.9101 -6.3729 -0.7721 12 1 6.0687 -5.8476 0.1697 13 6 5.2076 -7.7312 -0.6093 14 6 6.1713 -8.2669 -1.6852 15 1 6.5403 -9.2717 -1.4797 16 8 5.6824 -8.1174 -3.0196 17 6 7.1427 -7.1544 -1.2567 18 6 4.0790 -3.7725 -3.8736 19 7 3.4097 -2.8183 -4.4660 20 7 2.8266 -1.9858 -3.5030 21 6 2.0465 -0.8741 -3.6107 22 6 1.5996 -0.2348 -2.5065 23 1 -0.3933 0.4417 -0.7650 24 1 1.7924 -0.5138 0.8899 25 1 1.5616 2.4679 1.2084 26 1 3.5347 1.7702 -0.0323 27 1 2.9833 -2.1990 -0.1368 28 1 5.4521 -5.7261 -2.7420 29 1 5.3536 -8.1834 0.3717 30 1 4.1634 -7.7229 -0.9216 31 1 5.0709 -8.8140 -3.2949 32 1 7.6596 -6.6807 -2.0914 33 1 7.8176 -7.4479 -0.4526 34 1 4.6289 -4.5577 -4.3712 35 1 1.7822 -0.4995 -4.5885 36 1 0.9815 0.6451 -2.6081 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_11618758.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:34 Heat of formation + Delta-G solvation = 17.406843 kcal Electronic energy + Delta-G solvation = -22737.209479 eV Core-core repulsion = 19190.860808 eV Total energy + Delta-G solvation = -3546.348670 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.110 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.33956 -41.18063 -39.58701 -39.17347 -37.22254 -36.00764 -34.32547 -33.73884 -32.11571 -30.29716 -27.42078 -26.76264 -25.75969 -24.75447 -23.66461 -23.02434 -21.40315 -20.56420 -19.28311 -18.52052 -18.17594 -17.84950 -17.46571 -17.05070 -16.93011 -16.48799 -16.26572 -15.85886 -15.59186 -15.45280 -15.32068 -14.77512 -14.50526 -14.25762 -14.02524 -13.63395 -13.54190 -13.48248 -13.15492 -12.67033 -12.42449 -12.31015 -12.23956 -12.01766 -11.60491 -11.44972 -11.04738 -10.80496 -10.67364 -10.27774 -10.08113 -8.83424 -5.07983 -0.59567 -0.13458 0.95701 1.02725 1.19353 1.67506 1.95238 2.05107 2.16492 2.42659 3.03742 3.14655 3.21924 3.44548 3.49973 3.59006 3.72260 3.74939 3.85829 3.86385 3.94745 4.14255 4.18757 4.34479 4.36736 4.59669 4.69413 4.71972 4.77893 4.84078 4.90140 4.98197 5.05269 5.08289 5.13800 5.25550 5.60260 5.65409 6.25256 6.57523 6.76308 6.86466 7.24752 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.078 4.078 3 Si 0.818 3.182 4 C -0.052 4.052 5 C -0.136 4.136 6 C 0.151 3.849 7 C -0.349 4.349 8 C 0.596 3.404 9 O -0.598 6.598 10 N -0.692 5.692 11 C 0.112 3.888 12 H 0.081 0.919 13 C -0.183 4.183 14 C 0.086 3.914 15 H 0.090 0.910 16 O -0.566 6.566 17 C -0.135 4.135 18 C 0.131 3.869 19 N -0.336 5.336 20 N -0.272 5.272 21 C 0.115 3.885 22 C -0.145 4.145 23 H 0.401 0.599 24 H 0.105 0.895 25 H -0.289 1.289 26 H -0.304 1.304 27 H 0.136 0.864 28 H 0.413 0.587 29 H 0.108 0.892 30 H 0.062 0.938 31 H 0.399 0.601 32 H 0.080 0.920 33 H 0.127 0.873 34 H 0.227 0.773 35 H 0.216 0.784 36 H 0.225 0.775 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.625 1.451 -4.866 5.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.185 4.185 3 Si 0.722 3.278 4 C -0.058 4.058 5 C -0.156 4.156 6 C 0.030 3.970 7 C -0.363 4.363 8 C 0.386 3.614 9 O -0.481 6.481 10 N -0.343 5.343 11 C 0.006 3.994 12 H 0.099 0.901 13 C -0.222 4.222 14 C 0.027 3.973 15 H 0.108 0.892 16 O -0.375 6.375 17 C -0.172 4.172 18 C -0.049 4.049 19 N -0.156 5.156 20 N -0.036 5.036 21 C -0.010 4.010 22 C -0.165 4.165 23 H 0.252 0.748 24 H 0.122 0.878 25 H -0.216 1.216 26 H -0.231 1.231 27 H 0.154 0.846 28 H 0.251 0.749 29 H 0.127 0.873 30 H 0.081 0.919 31 H 0.250 0.750 32 H 0.098 0.902 33 H 0.145 0.855 34 H 0.243 0.757 35 H 0.232 0.768 36 H 0.241 0.759 Dipole moment (debyes) X Y Z Total from point charges -1.103 2.802 -4.335 5.279 hybrid contribution 0.263 -1.899 0.929 2.130 sum -0.840 0.903 -3.407 3.623 Atomic orbital electron populations 1.86587 1.15872 1.82298 1.50750 1.25353 0.86019 1.11312 0.95866 0.93852 0.76855 0.72105 0.85025 1.20791 0.93934 0.93416 0.97662 1.20633 1.01145 0.96686 0.97104 1.19448 0.95990 0.94496 0.87073 1.19696 1.17941 1.04428 0.94272 1.17128 0.77408 0.79899 0.86951 1.90732 1.63383 1.73659 1.20283 1.45283 1.51394 1.26964 1.10665 1.21878 0.95002 0.90745 0.91793 0.90127 1.24197 0.99815 0.96657 1.01546 1.22794 0.93969 0.98759 0.81789 0.89183 1.86311 1.66937 1.55287 1.28957 1.23476 0.95778 0.95625 1.02346 1.24491 0.93497 0.95790 0.91154 1.77548 1.19753 1.07010 1.11277 1.46392 1.32558 1.19672 1.04966 1.22517 0.90597 0.83696 1.04207 1.21380 1.03454 1.03565 0.88110 0.74751 0.87785 1.21556 1.23143 0.84597 0.74900 0.87332 0.91897 0.75038 0.90169 0.85526 0.75666 0.76777 0.75903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.59 12.88 -148.98 -1.92 -0.33 16 2 C -0.08 0.15 2.84 71.24 0.20 0.35 16 3 Si 0.82 -3.88 31.95 68.60 2.19 -1.69 16 4 C -0.05 0.03 4.53 -19.81 -0.09 -0.06 16 5 C -0.14 -1.07 9.35 22.30 0.21 -0.86 16 6 C 0.15 1.46 6.76 39.49 0.27 1.73 16 7 C -0.35 -3.53 6.17 -19.90 -0.12 -3.65 16 8 C 0.60 7.47 7.78 86.41 0.67 8.14 16 9 O -0.60 -11.84 15.32 -4.42 -0.07 -11.91 16 10 N -0.69 -4.03 5.13 -444.10 -2.28 -6.30 16 11 C 0.11 0.46 4.30 45.52 0.20 0.65 16 12 H 0.08 0.67 7.50 -2.39 -0.02 0.65 16 13 C -0.18 -0.10 7.73 31.21 0.24 0.14 16 14 C 0.09 -0.25 5.28 31.22 0.16 -0.09 16 15 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 16 O -0.57 1.53 12.35 -148.98 -1.84 -0.31 16 17 C -0.13 0.23 7.65 31.12 0.24 0.47 16 18 C 0.13 0.65 11.44 85.42 0.98 1.63 16 19 N -0.34 -2.32 12.57 -56.61 -0.71 -3.03 16 20 N -0.27 -1.42 3.86 -187.28 -0.72 -2.14 16 21 C 0.12 -0.51 11.17 83.30 0.93 0.42 16 22 C -0.14 1.20 8.38 22.03 0.18 1.38 16 23 H 0.40 -5.69 8.10 -74.06 -0.60 -6.29 16 24 H 0.10 0.18 7.71 -2.39 -0.02 0.16 16 25 H -0.29 -0.66 7.11 99.48 0.71 0.05 16 26 H -0.30 -1.07 7.11 99.48 0.71 -0.36 16 27 H 0.14 1.62 7.01 -2.91 -0.02 1.60 16 28 H 0.41 0.73 6.55 -92.70 -0.61 0.12 16 29 H 0.11 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 31 H 0.40 -3.80 9.12 -74.06 -0.68 -4.48 16 32 H 0.08 -0.06 8.14 -2.39 -0.02 -0.08 16 33 H 0.13 -0.68 8.14 -2.39 -0.02 -0.70 16 34 H 0.23 -0.70 7.46 -2.91 -0.02 -0.72 16 35 H 0.22 -2.62 8.06 -2.91 -0.02 -2.64 16 36 H 0.22 -4.57 7.31 -2.91 -0.02 -4.59 16 Total: 0.00 -31.37 311.18 -1.97 -33.34 By element: Atomic # 1 Polarization: -17.20 SS G_CDS: -0.69 Total: -17.89 kcal Atomic # 6 Polarization: 6.19 SS G_CDS: 4.07 Total: 10.26 kcal Atomic # 7 Polarization: -7.76 SS G_CDS: -3.71 Total: -11.47 kcal Atomic # 8 Polarization: -8.73 SS G_CDS: -3.83 Total: -12.55 kcal Atomic # 14 Polarization: -3.88 SS G_CDS: 2.19 Total: -1.69 kcal Total: -31.37 -1.97 -33.34 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_11618758.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.745 kcal (2) G-P(sol) polarization free energy of solvation -31.373 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.965 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.338 kcal (6) G-S(sol) free energy of system = (1) + (5) 17.407 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds