Wall clock time and date at job start Sun Mar 7 2021 21:59:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35651 * 116.99941 * 2 1 4 4 C 1.38406 * 120.12195 * 0.23050 * 3 2 1 5 5 C 1.38727 * 120.02956 * 180.27761 * 4 3 2 6 6 O 1.35716 * 119.86182 * 179.76530 * 5 4 3 7 7 C 1.42895 * 117.00116 * 359.97438 * 6 5 4 8 8 C 1.39148 * 120.27717 * 359.74330 * 5 4 3 9 9 C 1.50694 * 119.88088 * 180.02562 * 8 5 4 10 10 O 1.42904 * 109.47194 * 74.98237 * 9 8 5 11 11 Si 1.86303 * 109.47125 * 194.97653 * 9 8 5 12 12 C 1.37587 * 120.23770 * 359.97438 * 8 5 4 13 13 C 1.39827 * 119.96211 * 0.02562 * 12 8 5 14 14 C 1.47304 * 120.13206 * 179.97438 * 13 12 8 15 15 O 1.21614 * 119.99794 * 179.97438 * 14 13 12 16 16 N 1.34780 * 119.99937 * 0.02562 * 14 13 12 17 17 C 1.46497 * 119.99769 * 179.97438 * 16 14 13 18 18 H 1.08997 * 112.85099 * 336.19494 * 17 16 14 19 19 C 1.53779 * 113.69123 * 107.46801 * 17 16 14 20 20 C 1.53779 * 87.08402 * 89.12592 * 19 17 16 21 21 H 1.09004 * 113.61501 * 139.97990 * 20 19 17 22 22 O 1.42900 * 113.61490 * 270.88769 * 20 19 17 23 23 C 1.53784 * 87.08045 * 25.43458 * 20 19 17 24 24 H 1.08997 * 109.46894 * 300.00272 * 1 2 3 25 25 H 1.09003 * 109.46608 * 59.99993 * 1 2 3 26 26 H 1.09000 * 109.47136 * 180.02562 * 1 2 3 27 27 H 1.07999 * 119.98390 * 0.02562 * 4 3 2 28 28 H 1.09000 * 109.47622 * 179.97438 * 7 6 5 29 29 H 1.09001 * 109.47399 * 300.00420 * 7 6 5 30 30 H 1.09004 * 109.46902 * 60.00026 * 7 6 5 31 31 H 1.08993 * 109.47395 * 314.97807 * 9 8 5 32 32 H 0.96701 * 113.99638 * 299.99559 * 10 9 8 33 33 H 1.48500 * 109.99851 * 298.68470 * 11 9 8 34 34 H 1.48504 * 109.99600 * 60.00184 * 11 9 8 35 35 H 1.08000 * 120.02088 * 179.97438 * 12 8 5 36 36 H 0.96998 * 119.99913 * 0.02562 * 16 14 13 37 37 H 1.09006 * 113.61280 * 203.67416 * 19 17 16 38 38 H 1.08999 * 113.61062 * 334.49170 * 19 17 16 39 39 H 0.96701 * 113.99636 * 277.49879 * 22 20 19 40 40 H 1.09004 * 113.61451 * 220.02152 * 23 20 19 41 41 H 1.08994 * 113.61477 * 89.11454 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 0.0048 5 6 1.9253 3.6061 -0.0010 6 8 1.1852 4.7437 -0.0011 7 6 -0.2358 4.5932 0.0044 8 6 3.3147 3.6834 -0.0063 9 6 3.9916 5.0297 -0.0121 10 8 3.8985 5.6153 1.2882 11 14 5.7849 4.8212 -0.4721 12 6 4.0725 2.5351 -0.0053 13 6 3.4462 1.2850 0.0005 14 6 4.2539 0.0532 0.0011 15 8 3.7066 -1.0328 0.0067 16 7 5.5995 0.1297 -0.0035 17 6 6.4028 -1.0954 -0.0024 18 1 5.8677 -1.9520 0.4073 19 6 7.0907 -1.3844 -1.3471 20 6 8.2727 -0.5457 -0.8332 21 1 9.2472 -0.9586 -1.0941 22 8 8.1600 0.8468 -1.1337 23 6 7.8105 -0.9086 0.5880 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 0.2150 2.3165 0.0090 28 1 -0.7054 5.5768 0.0042 29 1 -0.5462 4.0417 -0.8830 30 1 -0.5397 4.0461 0.8969 31 1 3.5033 5.6789 -0.7387 32 1 2.9913 5.7534 1.5933 33 1 6.4695 3.9638 0.5286 34 1 5.8953 4.2131 -1.8224 35 1 5.1506 2.5992 -0.0099 36 1 6.0360 0.9959 -0.0069 37 1 7.3339 -2.4366 -1.4958 38 1 6.5797 -0.9430 -2.2027 39 1 8.4493 1.0812 -2.0262 40 1 7.8813 -0.0817 1.2946 41 1 8.2504 -1.8305 0.9681 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12297780.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:41 Heat of formation + Delta-G solvation = -122.428964 kcal Electronic energy + Delta-G solvation = -26928.132845 eV Core-core repulsion = 22970.122539 eV Total energy + Delta-G solvation = -3958.010306 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.11555 -41.09162 -40.17417 -39.22162 -38.33278 -36.90037 -36.03331 -33.83730 -32.20296 -31.56048 -29.14094 -28.31981 -26.80306 -26.07888 -25.75822 -24.27092 -22.85478 -21.49514 -20.57853 -20.01572 -18.92823 -18.51478 -18.15427 -17.64453 -17.30367 -17.18644 -16.65215 -16.64114 -16.42478 -16.23346 -15.80417 -15.56787 -15.47653 -15.28870 -14.96120 -14.27115 -14.20255 -13.94419 -13.74177 -13.62243 -13.46203 -13.28759 -12.84071 -12.68977 -12.65306 -12.56565 -12.32257 -12.11004 -11.70712 -11.48162 -11.27837 -11.02463 -10.77266 -10.61586 -9.97099 -9.88090 -9.14820 -4.79567 -0.23389 0.10882 1.42052 1.68498 1.86273 1.93786 1.99788 2.12546 2.18780 2.69911 2.98984 3.41031 3.47278 3.51368 3.65191 3.70502 3.78942 3.84850 3.91767 3.96673 4.01929 4.07171 4.09727 4.11253 4.12399 4.22653 4.35549 4.45297 4.50872 4.62625 4.67288 4.77279 4.79361 4.84563 4.91891 4.97788 5.01685 5.06698 5.26640 5.69168 5.91412 6.25910 6.54101 6.64339 6.69728 7.42653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.232 3.768 4 C -0.309 4.309 5 C 0.209 3.791 6 O -0.307 6.307 7 C 0.023 3.977 8 C -0.188 4.188 9 C -0.068 4.068 10 O -0.535 6.535 11 Si 0.739 3.261 12 C -0.011 4.011 13 C -0.205 4.205 14 C 0.566 3.434 15 O -0.520 6.520 16 N -0.709 5.709 17 C 0.127 3.873 18 H 0.105 0.895 19 C -0.186 4.186 20 C 0.077 3.923 21 H 0.073 0.927 22 O -0.556 6.556 23 C -0.143 4.143 24 H 0.058 0.942 25 H 0.057 0.943 26 H 0.108 0.892 27 H 0.146 0.854 28 H 0.109 0.891 29 H 0.060 0.940 30 H 0.060 0.940 31 H 0.075 0.925 32 H 0.365 0.635 33 H -0.248 1.248 34 H -0.246 1.246 35 H 0.138 0.862 36 H 0.402 0.598 37 H 0.100 0.900 38 H 0.077 0.923 39 H 0.385 0.615 40 H 0.083 0.917 41 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.687 3.142 -1.853 3.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.183 6.183 3 C 0.182 3.818 4 C -0.328 4.328 5 C 0.161 3.839 6 O -0.219 6.219 7 C -0.072 4.072 8 C -0.190 4.190 9 C -0.177 4.177 10 O -0.341 6.341 11 Si 0.637 3.363 12 C -0.029 4.029 13 C -0.209 4.209 14 C 0.354 3.646 15 O -0.396 6.396 16 N -0.363 5.363 17 C 0.021 3.979 18 H 0.123 0.877 19 C -0.225 4.225 20 C 0.018 3.982 21 H 0.091 0.909 22 O -0.362 6.362 23 C -0.181 4.181 24 H 0.076 0.924 25 H 0.076 0.924 26 H 0.126 0.874 27 H 0.164 0.836 28 H 0.127 0.873 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.093 0.907 32 H 0.213 0.787 33 H -0.173 1.173 34 H -0.170 1.170 35 H 0.155 0.845 36 H 0.239 0.761 37 H 0.118 0.882 38 H 0.095 0.905 39 H 0.233 0.767 40 H 0.101 0.899 41 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 0.068 1.778 -1.493 2.323 hybrid contribution -1.839 -0.261 -0.429 1.907 sum -1.771 1.517 -1.922 3.022 Atomic orbital electron populations 1.23251 0.78209 1.04909 1.01306 1.86409 1.21191 1.24937 1.85810 1.18692 0.90522 0.84493 0.88056 1.21280 1.01091 0.91420 1.19030 1.18712 0.90223 0.84839 0.90104 1.86036 1.19885 1.28744 1.87198 1.23223 0.77373 1.04774 1.01843 1.19459 0.90447 0.96761 1.12284 1.25106 1.13685 0.90276 0.88623 1.86717 1.32154 1.83109 1.32080 0.93068 0.75765 0.88077 0.79350 1.20829 0.99077 0.90269 0.92711 1.19098 0.90777 0.93601 1.17443 1.17806 0.81792 0.88544 0.76432 1.90831 1.71426 1.28557 1.48775 1.45582 1.05499 1.09424 1.75750 1.21723 0.91154 0.88451 0.96530 0.87656 1.24148 0.98119 1.01494 0.98709 1.22802 0.97098 0.81687 0.96627 0.90896 1.86361 1.88978 1.23314 1.37523 1.23475 0.95292 1.03185 0.96172 0.92376 0.92402 0.87393 0.83602 0.87307 0.92160 0.92096 0.90669 0.78712 1.17286 1.17004 0.84511 0.76087 0.88162 0.90453 0.76695 0.89860 0.87085 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.27 -1.28 8.56 -40.58 -0.35 -1.63 16 3 C 0.23 0.97 6.70 -38.73 -0.26 0.71 16 4 C -0.31 -0.53 8.01 -39.34 -0.31 -0.84 16 5 C 0.21 0.40 6.62 -39.06 -0.26 0.14 16 6 O -0.31 -0.09 9.35 -18.85 -0.18 -0.27 16 7 C 0.02 -0.07 9.80 101.05 0.99 0.93 16 8 C -0.19 -0.50 5.27 -104.52 -0.55 -1.05 16 9 C -0.07 -0.09 2.32 36.00 0.08 -0.01 16 10 O -0.54 -1.06 12.65 -35.23 -0.45 -1.50 16 11 Si 0.74 0.17 30.39 -169.99 -5.17 -5.00 16 12 C -0.01 -0.03 8.14 -39.23 -0.32 -0.35 16 13 C -0.21 -0.99 5.89 -104.83 -0.62 -1.61 16 14 C 0.57 3.42 7.76 -12.57 -0.10 3.32 16 15 O -0.52 -4.71 14.75 -16.66 -0.25 -4.95 16 16 N -0.71 -2.51 5.10 -54.13 -0.28 -2.79 16 17 C 0.13 0.27 4.32 -67.12 -0.29 -0.02 16 18 H 0.11 0.35 7.46 -51.93 -0.39 -0.04 16 19 C -0.19 -0.07 7.71 -25.92 -0.20 -0.27 16 20 C 0.08 -0.04 5.28 -25.92 -0.14 -0.18 16 21 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 22 O -0.56 0.03 12.32 -35.23 -0.43 -0.41 16 23 C -0.14 0.01 7.66 -25.91 -0.20 -0.19 16 24 H 0.06 -0.10 7.65 -51.93 -0.40 -0.49 16 25 H 0.06 -0.10 7.67 -51.93 -0.40 -0.50 16 26 H 0.11 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.15 -0.15 4.50 -52.49 -0.24 -0.38 16 28 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 29 H 0.06 -0.21 7.65 -51.93 -0.40 -0.61 16 30 H 0.06 -0.22 7.65 -51.93 -0.40 -0.62 16 31 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 32 H 0.37 -0.02 8.58 45.56 0.39 0.37 16 33 H -0.25 -0.58 6.80 56.52 0.38 -0.20 16 34 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 35 H 0.14 0.33 3.24 -52.49 -0.17 0.16 16 36 H 0.40 1.08 5.62 -40.82 -0.23 0.85 16 37 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 38 H 0.08 0.12 8.14 -51.93 -0.42 -0.31 16 39 H 0.38 -1.41 9.12 45.56 0.42 -0.99 16 40 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 41 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 336.28 15.07 5.07 5.07 Total: 0.00 -8.93 336.28 -7.59 -16.52 By element: Atomic # 1 Polarization: -2.22 SS G_CDS: -4.39 Total: -6.60 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: -1.18 Total: 1.57 kcal Atomic # 7 Polarization: -2.51 SS G_CDS: -0.28 Total: -2.79 kcal Atomic # 8 Polarization: -7.11 SS G_CDS: -1.65 Total: -8.76 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: -5.17 Total: -5.00 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -8.93 -7.59 -16.52 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12297780.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.907 kcal (2) G-P(sol) polarization free energy of solvation -8.935 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.522 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds