Wall clock time and date at job start Sun Mar 7 2021 21:59:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42910 * 1 3 3 C 1.35651 * 116.99941 * 2 1 4 4 C 1.38406 * 120.12195 * 0.23050 * 3 2 1 5 5 C 1.38727 * 120.02956 * 180.27761 * 4 3 2 6 6 O 1.35716 * 119.86182 * 179.76530 * 5 4 3 7 7 C 1.42895 * 117.00116 * 359.97438 * 6 5 4 8 8 C 1.39148 * 120.27717 * 359.74330 * 5 4 3 9 9 C 1.50694 * 119.88088 * 180.02562 * 8 5 4 10 10 O 1.42904 * 109.47194 * 74.98237 * 9 8 5 11 11 Si 1.86303 * 109.47125 * 194.97653 * 9 8 5 12 12 C 1.37587 * 120.23770 * 359.97438 * 8 5 4 13 13 C 1.39827 * 119.96211 * 0.02562 * 12 8 5 14 14 C 1.47304 * 120.13206 * 179.97438 * 13 12 8 15 15 O 1.21614 * 119.99794 * 179.97438 * 14 13 12 16 16 N 1.34780 * 119.99937 * 0.02562 * 14 13 12 17 17 C 1.46497 * 119.99769 * 179.97438 * 16 14 13 18 18 H 1.08997 * 112.85099 * 336.19494 * 17 16 14 19 19 C 1.53779 * 113.69123 * 107.46801 * 17 16 14 20 20 C 1.53779 * 87.08402 * 89.12592 * 19 17 16 21 21 H 1.09004 * 113.61501 * 139.97990 * 20 19 17 22 22 O 1.42900 * 113.61490 * 270.88769 * 20 19 17 23 23 C 1.53784 * 87.08045 * 25.43458 * 20 19 17 24 24 H 1.08997 * 109.46894 * 300.00272 * 1 2 3 25 25 H 1.09003 * 109.46608 * 59.99993 * 1 2 3 26 26 H 1.09000 * 109.47136 * 180.02562 * 1 2 3 27 27 H 1.07999 * 119.98390 * 0.02562 * 4 3 2 28 28 H 1.09000 * 109.47622 * 179.97438 * 7 6 5 29 29 H 1.09001 * 109.47399 * 300.00420 * 7 6 5 30 30 H 1.09004 * 109.46902 * 60.00026 * 7 6 5 31 31 H 1.08993 * 109.47395 * 314.97807 * 9 8 5 32 32 H 0.96701 * 113.99638 * 299.99559 * 10 9 8 33 33 H 1.48500 * 109.99851 * 298.68470 * 11 9 8 34 34 H 1.48504 * 109.99600 * 60.00184 * 11 9 8 35 35 H 1.08000 * 120.02088 * 179.97438 * 12 8 5 36 36 H 0.96998 * 119.99913 * 0.02562 * 16 14 13 37 37 H 1.09006 * 113.61280 * 203.67416 * 19 17 16 38 38 H 1.08999 * 113.61062 * 334.49170 * 19 17 16 39 39 H 0.96701 * 113.99636 * 277.49879 * 22 20 19 40 40 H 1.09004 * 113.61451 * 220.02152 * 23 20 19 41 41 H 1.08994 * 113.61477 * 89.11454 * 23 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 1.2936 2.3710 0.0048 5 6 1.9253 3.6061 -0.0010 6 8 1.1852 4.7437 -0.0011 7 6 -0.2358 4.5932 0.0044 8 6 3.3147 3.6834 -0.0063 9 6 3.9916 5.0297 -0.0121 10 8 3.8985 5.6153 1.2882 11 14 5.7849 4.8212 -0.4721 12 6 4.0725 2.5351 -0.0053 13 6 3.4462 1.2850 0.0005 14 6 4.2539 0.0532 0.0011 15 8 3.7066 -1.0328 0.0067 16 7 5.5995 0.1297 -0.0035 17 6 6.4028 -1.0954 -0.0024 18 1 5.8677 -1.9520 0.4073 19 6 7.0907 -1.3844 -1.3471 20 6 8.2727 -0.5457 -0.8332 21 1 9.2472 -0.9586 -1.0941 22 8 8.1600 0.8468 -1.1337 23 6 7.8105 -0.9086 0.5880 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 0.2150 2.3165 0.0090 28 1 -0.7054 5.5768 0.0042 29 1 -0.5462 4.0417 -0.8830 30 1 -0.5397 4.0461 0.8969 31 1 3.5033 5.6789 -0.7387 32 1 2.9913 5.7534 1.5933 33 1 6.4695 3.9638 0.5286 34 1 5.8953 4.2131 -1.8224 35 1 5.1506 2.5992 -0.0099 36 1 6.0360 0.9959 -0.0069 37 1 7.3339 -2.4366 -1.4958 38 1 6.5797 -0.9430 -2.2027 39 1 8.4493 1.0812 -2.0262 40 1 7.8813 -0.0817 1.2946 41 1 8.2504 -1.8305 0.9681 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12297780.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:40 Heat of formation + Delta-G solvation = -125.938749 kcal Electronic energy + Delta-G solvation = -26928.285040 eV Core-core repulsion = 22970.122539 eV Total energy + Delta-G solvation = -3958.162502 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.28502 -41.23503 -40.27184 -39.45473 -38.45091 -37.05855 -36.12050 -34.09125 -32.35354 -31.70489 -29.06423 -28.28705 -26.83189 -26.21399 -25.86306 -24.40762 -22.98223 -21.73993 -20.72260 -20.11363 -19.05767 -18.62655 -18.19356 -17.76922 -17.44038 -17.27275 -16.82796 -16.68043 -16.52025 -16.31984 -15.89299 -15.83421 -15.58434 -15.41286 -15.04867 -14.43174 -14.28381 -13.99993 -13.83032 -13.62491 -13.58387 -13.39955 -12.74771 -12.70552 -12.61283 -12.59893 -12.39501 -12.24437 -11.79957 -11.53306 -11.41092 -11.21039 -10.94708 -10.75145 -10.22000 -10.06290 -9.33542 -4.83640 -0.45182 -0.07966 1.35831 1.53889 1.66523 1.93089 1.94247 1.95370 2.04975 2.42659 3.05787 3.26827 3.39904 3.42966 3.51786 3.62256 3.69534 3.78534 3.92321 3.95784 4.03263 4.09500 4.13406 4.21109 4.22762 4.27613 4.36285 4.55218 4.59862 4.63721 4.66332 4.66429 4.74373 4.78938 4.79590 4.88292 4.91538 4.98243 5.11960 5.47757 5.88997 6.15425 6.35907 6.63279 6.78243 7.06020 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.305 6.305 3 C 0.218 3.782 4 C -0.303 4.303 5 C 0.213 3.787 6 O -0.310 6.310 7 C 0.011 3.989 8 C -0.199 4.199 9 C -0.075 4.075 10 O -0.546 6.546 11 Si 0.797 3.203 12 C -0.014 4.014 13 C -0.232 4.232 14 C 0.560 3.440 15 O -0.561 6.561 16 N -0.702 5.702 17 C 0.107 3.893 18 H 0.087 0.913 19 C -0.180 4.180 20 C 0.084 3.916 21 H 0.097 0.903 22 O -0.573 6.573 23 C -0.137 4.137 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.115 0.885 27 H 0.173 0.827 28 H 0.128 0.872 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.089 0.911 32 H 0.374 0.626 33 H -0.281 1.281 34 H -0.261 1.261 35 H 0.138 0.862 36 H 0.406 0.594 37 H 0.115 0.885 38 H 0.063 0.937 39 H 0.400 0.600 40 H 0.074 0.926 41 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.003 4.314 -2.160 4.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.216 6.216 3 C 0.169 3.831 4 C -0.322 4.322 5 C 0.165 3.835 6 O -0.221 6.221 7 C -0.083 4.083 8 C -0.201 4.201 9 C -0.183 4.183 10 O -0.352 6.352 11 Si 0.698 3.302 12 C -0.033 4.033 13 C -0.236 4.236 14 C 0.349 3.651 15 O -0.441 6.441 16 N -0.354 5.354 17 C 0.001 3.999 18 H 0.105 0.895 19 C -0.219 4.219 20 C 0.025 3.975 21 H 0.115 0.885 22 O -0.382 6.382 23 C -0.175 4.175 24 H 0.093 0.907 25 H 0.093 0.907 26 H 0.133 0.867 27 H 0.190 0.810 28 H 0.146 0.854 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.107 0.893 32 H 0.223 0.777 33 H -0.208 1.208 34 H -0.186 1.186 35 H 0.156 0.844 36 H 0.243 0.757 37 H 0.134 0.866 38 H 0.082 0.918 39 H 0.250 0.750 40 H 0.092 0.908 41 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -0.244 2.991 -1.812 3.505 hybrid contribution -1.831 -0.600 -0.317 1.953 sum -2.076 2.390 -2.129 3.815 Atomic orbital electron populations 1.23536 0.76106 1.06019 1.02894 1.86371 1.23589 1.25657 1.85939 1.18904 0.90571 0.85190 0.88433 1.21484 1.02268 0.90439 1.17991 1.18773 0.90228 0.85435 0.89044 1.86048 1.21546 1.27919 1.86620 1.23551 0.75537 1.06436 1.02781 1.19683 0.91171 0.96993 1.12207 1.25277 1.14465 0.89827 0.88776 1.86682 1.33072 1.83060 1.32377 0.92476 0.73988 0.86717 0.77007 1.20852 0.99256 0.90190 0.92954 1.19190 0.91484 0.93504 1.19455 1.18130 0.82492 0.88576 0.75879 1.90784 1.72225 1.29942 1.51174 1.45597 1.05010 1.10140 1.74660 1.21977 0.91919 0.87451 0.98521 0.89486 1.24147 0.98170 1.02614 0.96942 1.22801 0.97585 0.81380 0.95711 0.88514 1.86330 1.89235 1.23661 1.38926 1.23530 0.93538 1.03913 0.96506 0.90745 0.90709 0.86701 0.80950 0.85378 0.91246 0.91094 0.89341 0.77742 1.20798 1.18600 0.84449 0.75678 0.86645 0.91825 0.74968 0.90778 0.84918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 9.81 113.37 1.11 1.11 16 2 O -0.30 -3.38 8.56 -68.70 -0.59 -3.97 16 3 C 0.22 2.15 6.70 22.82 0.15 2.30 16 4 C -0.30 -0.99 8.01 22.43 0.18 -0.82 16 5 C 0.21 0.75 6.62 22.61 0.15 0.90 16 6 O -0.31 0.21 9.35 -90.38 -0.85 -0.64 16 7 C 0.01 -0.08 9.80 113.37 1.11 1.03 16 8 C -0.20 -1.15 5.27 -19.80 -0.10 -1.25 16 9 C -0.08 -0.20 2.32 71.23 0.17 -0.03 16 10 O -0.55 -2.00 12.65 -148.98 -1.89 -3.88 16 11 Si 0.80 0.72 30.39 68.60 2.09 2.80 16 12 C -0.01 -0.12 8.14 22.50 0.18 0.07 16 13 C -0.23 -2.77 5.89 -20.00 -0.12 -2.89 16 14 C 0.56 8.46 7.76 86.63 0.67 9.14 16 15 O -0.56 -12.16 14.75 16.89 0.25 -11.91 16 16 N -0.70 -6.75 5.10 -443.42 -2.26 -9.01 16 17 C 0.11 0.66 4.32 45.52 0.20 0.85 16 18 H 0.09 0.83 7.46 -2.39 -0.02 0.81 16 19 C -0.18 -0.28 7.71 31.12 0.24 -0.04 16 20 C 0.08 -0.11 5.28 31.12 0.16 0.06 16 21 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 22 O -0.57 -0.12 12.32 -148.98 -1.84 -1.96 16 23 C -0.14 -0.06 7.66 31.12 0.24 0.18 16 24 H 0.07 -0.29 7.65 -2.39 -0.02 -0.30 16 25 H 0.07 -0.30 7.67 -2.39 -0.02 -0.32 16 26 H 0.11 -0.25 8.14 -2.39 -0.02 -0.27 16 27 H 0.17 -0.58 4.50 -2.91 -0.01 -0.59 16 28 H 0.13 -1.46 8.14 -2.39 -0.02 -1.48 16 29 H 0.07 -0.63 7.65 -2.39 -0.02 -0.65 16 30 H 0.07 -0.66 7.65 -2.38 -0.02 -0.68 16 31 H 0.09 -0.01 7.82 -2.39 -0.02 -0.03 16 32 H 0.37 -0.23 8.58 -74.06 -0.64 -0.86 16 33 H -0.28 -1.75 6.80 99.48 0.68 -1.08 16 34 H -0.26 -0.82 7.11 99.48 0.71 -0.11 16 35 H 0.14 0.95 3.24 -2.91 -0.01 0.94 16 36 H 0.41 3.13 5.62 -92.71 -0.52 2.61 16 37 H 0.12 -0.20 8.14 -2.38 -0.02 -0.22 16 38 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 39 H 0.40 -2.92 9.12 -74.06 -0.68 -3.59 16 40 H 0.07 0.19 8.14 -2.39 -0.02 0.17 16 41 H 0.13 -0.57 8.14 -2.39 -0.02 -0.58 16 Total: 0.00 -23.03 336.28 -1.46 -24.49 By element: Atomic # 1 Polarization: -5.82 SS G_CDS: -0.72 Total: -6.54 kcal Atomic # 6 Polarization: 6.26 SS G_CDS: 4.34 Total: 10.60 kcal Atomic # 7 Polarization: -6.75 SS G_CDS: -2.26 Total: -9.01 kcal Atomic # 8 Polarization: -17.44 SS G_CDS: -4.91 Total: -22.35 kcal Atomic # 14 Polarization: 0.72 SS G_CDS: 2.09 Total: 2.80 kcal Total: -23.03 -1.46 -24.49 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12297780.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.450 kcal (2) G-P(sol) polarization free energy of solvation -23.033 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds