Wall clock time and date at job start Sun Mar 7 2021 21:59:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86298 * 109.47125 * 2 1 4 4 C 1.50708 * 109.47191 * 240.00163 * 2 1 3 5 5 C 1.38238 * 119.99499 * 299.99830 * 4 2 1 6 6 C 1.38236 * 119.99529 * 179.97438 * 5 4 2 7 7 C 1.38233 * 119.99979 * 359.97438 * 6 5 4 8 8 C 1.50700 * 119.99980 * 179.97438 * 7 6 5 9 9 C 1.50702 * 109.46869 * 90.00014 * 8 7 6 10 10 O 1.21283 * 120.00262 * 0.02562 * 9 8 7 11 11 N 1.34777 * 119.99928 * 179.72354 * 9 8 7 12 12 C 1.46499 * 120.00199 * 180.27479 * 11 9 8 13 13 H 1.09004 * 112.84964 * 25.33489 * 12 11 9 14 14 C 1.53778 * 113.61783 * 156.52956 * 12 11 9 15 15 C 1.53780 * 87.08089 * 139.98334 * 14 12 11 16 16 H 1.08999 * 113.61453 * 89.12275 * 15 14 12 17 17 O 1.42906 * 113.61253 * 219.93501 * 15 14 12 18 18 C 1.53778 * 113.61975 * 254.14080 * 12 11 9 19 19 C 1.38233 * 120.00375 * 0.27509 * 7 6 5 20 20 C 1.38234 * 120.00036 * 119.97640 * 4 2 1 21 21 H 0.96701 * 113.99968 * 300.00137 * 1 2 3 22 22 H 1.09001 * 109.47105 * 119.99980 * 2 1 3 23 23 H 1.48508 * 110.00122 * 299.99764 * 3 2 1 24 24 H 1.48497 * 110.00327 * 61.32039 * 3 2 1 25 25 H 1.07994 * 120.00177 * 359.97438 * 5 4 2 26 26 H 1.08000 * 119.99807 * 180.02562 * 6 5 4 27 27 H 1.09004 * 109.47210 * 330.00307 * 8 7 6 28 28 H 1.08994 * 109.47551 * 209.99960 * 8 7 6 29 29 H 0.97000 * 120.00317 * 0.28382 * 11 9 8 30 30 H 1.09002 * 113.61621 * 254.53540 * 14 12 11 31 31 H 1.09006 * 113.61136 * 25.43399 * 14 12 11 32 32 H 0.96703 * 113.99464 * 180.02562 * 17 15 14 33 33 H 1.09001 * 113.61335 * 334.56928 * 18 12 11 34 34 H 1.09000 * 113.61824 * 105.46531 * 18 12 11 35 35 H 1.07996 * 120.00354 * 179.72262 * 19 7 6 36 36 H 1.08002 * 119.99959 * 0.02562 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5974 -2.0339 -1.4492 6 6 2.0577 -2.6854 -2.5782 7 6 2.8516 -2.0132 -3.4886 8 6 3.3539 -2.7236 -4.7191 9 6 2.3606 -2.5513 -5.8393 10 8 1.3450 -1.9140 -5.6566 11 7 2.6037 -3.1003 -7.0459 12 6 1.6410 -2.9277 -8.1366 13 1 1.0322 -2.0304 -8.0257 14 6 2.2606 -3.0827 -9.5355 15 6 0.9819 -3.8394 -9.9319 16 1 0.1917 -3.1921 -10.3124 17 8 1.2232 -4.9715 -10.7698 18 6 0.8228 -4.1933 -8.4422 19 6 3.1898 -0.6913 -3.2673 20 6 2.7257 -0.0384 -2.1407 21 1 -0.3933 0.4417 0.7650 22 1 1.7923 -0.5138 0.8900 23 1 1.5615 2.4679 -1.2086 24 1 1.5879 2.4586 1.2242 25 1 0.9769 -2.5588 -0.7381 26 1 1.7965 -3.7192 -2.7493 27 1 3.4759 -3.7848 -4.5017 28 1 4.3136 -2.3010 -5.0163 29 1 3.4161 -3.6098 -7.1922 30 1 2.3900 -2.1376 -10.0629 31 1 3.1570 -3.7027 -9.5497 32 1 0.4226 -5.4513 -11.0228 33 1 1.3253 -5.1176 -8.1569 34 1 -0.2069 -4.1437 -8.0882 35 1 3.8137 -0.1675 -3.9764 36 1 2.9866 0.9955 -1.9697 There are 48 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 48 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12335836.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:47 Heat of formation + Delta-G solvation = -67.360304 kcal Electronic energy + Delta-G solvation = -19254.192714 eV Core-core repulsion = 16091.472367 eV Total energy + Delta-G solvation = -3162.720347 eV No. of doubly occupied orbitals = 48 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 264.119 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -41.37974 -40.48959 -39.46724 -37.79117 -36.35931 -34.34160 -33.71569 -31.94173 -29.84104 -26.80206 -26.18332 -24.62872 -23.81708 -22.12326 -21.42408 -20.79180 -18.78845 -18.60223 -18.07872 -17.58976 -16.95540 -16.86287 -16.30236 -16.12372 -15.98237 -15.31540 -15.08134 -14.67760 -14.65174 -14.35362 -13.99094 -13.75732 -13.52650 -13.41861 -13.13840 -13.00719 -12.64685 -12.32977 -12.25285 -11.92733 -11.76390 -11.73324 -11.06142 -10.80066 -10.53918 -10.07763 -9.87619 -9.59246 -4.96997 0.23042 0.45281 1.27285 1.56634 1.59767 1.92693 2.13263 2.73813 3.32372 3.38632 3.43789 3.62864 3.64043 3.79182 3.84615 3.88410 3.91735 4.05112 4.07547 4.31462 4.44975 4.46948 4.50336 4.62016 4.69127 4.71973 4.72643 4.91187 4.94840 5.00980 5.08630 5.13834 5.37377 5.51326 5.53979 5.58365 6.01232 6.53534 6.56129 6.83162 7.24616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.088 4.088 3 Si 0.768 3.232 4 C -0.092 4.092 5 C -0.109 4.109 6 C -0.117 4.117 7 C -0.073 4.073 8 C -0.097 4.097 9 C 0.512 3.488 10 O -0.583 6.583 11 N -0.708 5.708 12 C 0.120 3.880 13 H 0.098 0.902 14 C -0.129 4.129 15 C 0.079 3.921 16 H 0.096 0.904 17 O -0.576 6.576 18 C -0.179 4.179 19 C -0.110 4.110 20 C -0.126 4.126 21 H 0.394 0.606 22 H 0.096 0.904 23 H -0.306 1.306 24 H -0.283 1.283 25 H 0.124 0.876 26 H 0.133 0.867 27 H 0.131 0.869 28 H 0.136 0.864 29 H 0.418 0.582 30 H 0.088 0.912 31 H 0.101 0.899 32 H 0.396 0.604 33 H 0.093 0.907 34 H 0.066 0.934 35 H 0.144 0.856 36 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.576 -2.520 -0.420 6.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.197 4.197 3 Si 0.674 3.326 4 C -0.092 4.092 5 C -0.127 4.127 6 C -0.135 4.135 7 C -0.073 4.073 8 C -0.136 4.136 9 C 0.300 3.700 10 O -0.462 6.462 11 N -0.360 5.360 12 C 0.015 3.985 13 H 0.116 0.884 14 C -0.167 4.167 15 C 0.019 3.981 16 H 0.114 0.886 17 O -0.384 6.384 18 C -0.218 4.218 19 C -0.128 4.128 20 C -0.143 4.143 21 H 0.244 0.756 22 H 0.114 0.886 23 H -0.234 1.234 24 H -0.210 1.210 25 H 0.142 0.858 26 H 0.151 0.849 27 H 0.149 0.851 28 H 0.154 0.846 29 H 0.256 0.744 30 H 0.106 0.894 31 H 0.120 0.880 32 H 0.246 0.754 33 H 0.112 0.888 34 H 0.085 0.915 35 H 0.162 0.838 36 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 5.364 -1.369 -0.765 5.588 hybrid contribution -1.870 -0.480 0.431 1.979 sum 3.493 -1.849 -0.334 3.967 Atomic orbital electron populations 1.86563 1.18810 1.80668 1.51024 1.25074 0.83870 1.12027 0.98689 0.94200 0.90265 0.72040 0.76126 1.19511 0.98729 0.94648 0.96308 1.21096 0.99023 0.94438 0.98127 1.21245 0.97274 1.00767 0.94164 1.19586 0.97839 0.94494 0.95411 1.20769 0.98913 1.04497 0.89414 1.21140 0.87016 0.77613 0.84185 1.90749 1.30154 1.42236 1.83047 1.45854 1.24892 1.55065 1.10183 1.22119 0.91853 0.98602 0.85966 0.88390 1.23413 0.98316 1.01197 0.93777 1.23173 0.98365 0.88242 0.88306 0.88621 1.86469 1.38362 1.43564 1.69971 1.24179 1.01097 0.99052 0.97499 1.21225 1.00232 0.94126 0.97194 1.21125 0.98748 0.99872 0.94547 0.75560 0.88606 1.23373 1.21037 0.85810 0.84903 0.85125 0.84589 0.74395 0.89360 0.88010 0.75372 0.88838 0.91497 0.83812 0.84366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.44 12.74 -148.98 -1.90 -5.34 16 2 C -0.09 -0.25 2.81 71.24 0.20 -0.05 16 3 Si 0.77 0.54 29.79 68.60 2.04 2.58 16 4 C -0.09 -0.58 5.42 -19.86 -0.11 -0.69 16 5 C -0.11 -0.74 9.61 22.27 0.21 -0.53 16 6 C -0.12 -0.57 9.70 22.27 0.22 -0.36 16 7 C -0.07 -0.22 4.37 -19.87 -0.09 -0.31 16 8 C -0.10 0.37 5.83 29.10 0.17 0.54 16 9 C 0.51 1.46 7.82 87.66 0.69 2.14 16 10 O -0.58 -8.08 15.65 -3.04 -0.05 -8.12 16 11 N -0.71 1.72 5.36 -440.04 -2.36 -0.64 16 12 C 0.12 -0.03 4.21 45.52 0.19 0.16 16 13 H 0.10 0.40 7.50 -2.39 -0.02 0.38 16 14 C -0.13 0.38 7.66 31.12 0.24 0.62 16 15 C 0.08 -0.16 5.21 31.18 0.16 0.00 16 16 H 0.10 -0.39 8.14 -2.39 -0.02 -0.41 16 17 O -0.58 0.17 13.68 -148.98 -2.04 -1.87 16 18 C -0.18 0.15 7.73 31.18 0.24 0.39 16 19 C -0.11 -0.36 9.70 22.27 0.22 -0.15 16 20 C -0.13 -0.58 8.67 22.27 0.19 -0.38 16 21 H 0.39 -1.01 8.74 -74.06 -0.65 -1.66 16 22 H 0.10 -0.16 7.96 -2.39 -0.02 -0.18 16 23 H -0.31 -2.76 7.11 99.48 0.71 -2.06 16 24 H -0.28 -1.14 7.11 99.48 0.71 -0.43 16 25 H 0.12 0.69 8.06 -2.91 -0.02 0.66 16 26 H 0.13 0.19 8.06 -2.91 -0.02 0.16 16 27 H 0.13 -1.16 8.09 -2.38 -0.02 -1.18 16 28 H 0.14 -1.33 8.08 -2.39 -0.02 -1.35 16 29 H 0.42 -3.71 8.71 -92.71 -0.81 -4.52 16 30 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 31 H 0.10 -0.40 8.11 -2.38 -0.02 -0.41 16 32 H 0.40 -3.09 9.12 -74.05 -0.68 -3.76 16 33 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 34 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 35 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 36 H 0.14 0.10 4.88 -2.91 -0.01 0.09 16 Total: 0.00 -24.58 308.14 -2.74 -27.32 By element: Atomic # 1 Polarization: -14.35 SS G_CDS: -0.97 Total: -15.32 kcal Atomic # 6 Polarization: -1.14 SS G_CDS: 2.53 Total: 1.39 kcal Atomic # 7 Polarization: 1.72 SS G_CDS: -2.36 Total: -0.64 kcal Atomic # 8 Polarization: -11.35 SS G_CDS: -3.98 Total: -15.33 kcal Atomic # 14 Polarization: 0.54 SS G_CDS: 2.04 Total: 2.58 kcal Total: -24.58 -2.74 -27.32 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335836.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.045 kcal (2) G-P(sol) polarization free energy of solvation -24.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.621 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.739 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.316 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.360 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds