Wall clock time and date at job start Sun Mar 7 2021 21:59:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47219 * 2 1 4 4 C 1.50703 * 109.46981 * 240.00270 * 2 1 3 5 5 C 1.34452 * 126.48193 * 105.00050 * 4 2 1 6 6 N 1.36572 * 109.98357 * 179.97438 * 5 4 2 7 7 C 1.37829 * 109.85831 * 0.02562 * 6 5 4 8 8 C 1.38649 * 133.37272 * 180.28097 * 7 6 5 9 9 C 1.39322 * 119.66280 * 180.19354 * 8 7 6 10 10 C 1.47579 * 119.83473 * 179.76703 * 9 8 7 11 11 O 1.21589 * 119.99762 * 359.72457 * 10 9 8 12 12 N 1.34776 * 119.99980 * 179.72333 * 10 9 8 13 13 C 1.46497 * 119.99532 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.91349 * 23.75050 * 13 12 10 15 15 C 1.53793 * 113.61160 * 155.00131 * 13 12 10 16 16 C 1.53781 * 87.07845 * 89.11793 * 15 13 12 17 17 H 1.09002 * 113.61228 * 139.98223 * 16 15 13 18 18 O 1.42901 * 113.61413 * 270.79882 * 16 15 13 19 19 C 1.53777 * 113.61724 * 252.49827 * 13 12 10 20 20 C 1.40209 * 120.33166 * 359.49155 * 9 8 7 21 21 C 1.36228 * 120.38081 * 0.25183 * 20 9 8 22 22 C 1.39874 * 119.96021 * 0.02562 * 21 20 9 23 23 H 0.96700 * 114.00091 * 59.99516 * 1 2 3 24 24 H 1.08997 * 109.47073 * 120.00063 * 2 1 3 25 25 H 1.48501 * 110.00097 * 298.68180 * 3 2 1 26 26 H 1.48499 * 109.99849 * 60.00148 * 3 2 1 27 27 H 1.07997 * 125.00816 * 359.97438 * 5 4 2 28 28 H 0.96994 * 125.06912 * 180.02562 * 6 5 4 29 29 H 1.07993 * 120.16928 * 359.95793 * 8 7 6 30 30 H 0.96998 * 119.99873 * 359.97438 * 12 10 9 31 31 H 1.09000 * 113.61258 * 334.56928 * 15 13 12 32 32 H 1.09001 * 113.68788 * 203.67855 * 15 13 12 33 33 H 0.96698 * 114.00171 * 178.47521 * 18 16 15 34 34 H 1.08999 * 113.61947 * 156.34089 * 19 13 12 35 35 H 1.08997 * 113.61348 * 25.43304 * 19 13 12 36 36 H 1.08001 * 119.80340 * 180.27756 * 20 9 8 37 37 H 1.08004 * 120.02025 * 180.02562 * 21 20 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4616 -0.1362 -2.3246 6 7 2.8039 -1.0947 -3.2352 7 6 2.4949 -2.3431 -2.7396 8 6 2.6361 -3.6282 -3.2406 9 6 2.2128 -4.7154 -2.4793 10 6 2.3566 -6.0846 -3.0110 11 8 2.8389 -6.2612 -4.1130 12 7 1.9532 -7.1391 -2.2750 13 6 2.0955 -8.4982 -2.8031 14 1 2.8740 -8.5793 -3.5617 15 6 2.1848 -9.5773 -1.7110 16 6 0.6503 -9.6562 -1.7740 17 1 0.2620 -10.6722 -1.7018 18 8 -0.0066 -8.7469 -0.8887 19 6 0.7615 -9.1405 -3.2185 20 6 1.6560 -4.5158 -1.2080 21 6 1.5185 -3.2568 -0.7061 22 6 1.9335 -2.1547 -1.4608 23 1 -0.3933 0.4418 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4678 1.2085 27 1 2.5968 0.9263 -2.4628 28 1 3.2047 -0.9225 -4.1016 29 1 3.0686 -3.7853 -4.2176 30 1 1.5688 -6.9982 -1.3957 31 1 2.5641 -9.2050 -0.7594 32 1 2.6828 -10.4903 -2.0372 33 1 -0.9717 -8.7755 -0.9406 34 1 0.8703 -9.9337 -3.9581 35 1 -0.0082 -8.4157 -3.4838 36 1 1.3348 -5.3651 -0.6233 37 1 1.0892 -3.1098 0.2740 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12335838.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:50 Heat of formation + Delta-G solvation = -21.143963 kcal Electronic energy + Delta-G solvation = -22392.126421 eV Core-core repulsion = 18909.531974 eV Total energy + Delta-G solvation = -3482.594448 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.44771 -41.27214 -39.66685 -37.91807 -37.42976 -36.06423 -33.82951 -33.22526 -30.67873 -30.46870 -26.82491 -26.56826 -25.89774 -24.11495 -23.56109 -21.48132 -20.82239 -20.56309 -19.44477 -18.65298 -18.03697 -17.59030 -17.05640 -16.90903 -16.37111 -16.17459 -15.83139 -15.65195 -15.61448 -15.12093 -15.04890 -14.71133 -14.66557 -14.37967 -13.87868 -13.63317 -13.59779 -13.08255 -12.67429 -12.57422 -12.46339 -12.34445 -12.12453 -11.77752 -11.50550 -10.86450 -10.74397 -10.71684 -10.47066 -9.95623 -9.30480 -8.77896 -4.96437 -0.21102 0.45409 1.29977 1.39387 1.55239 1.90522 1.96733 2.07391 2.27745 2.97751 2.99418 3.44186 3.48923 3.61436 3.66994 3.78272 3.80919 3.84223 3.93600 4.06928 4.18283 4.35587 4.47182 4.54119 4.60553 4.60929 4.66626 4.77277 4.80351 4.86892 4.95290 4.99547 5.03914 5.31213 5.49612 5.51555 5.65101 5.66735 6.03469 6.38507 6.50731 6.53802 6.68012 7.34756 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.073 3.927 6 N -0.584 5.584 7 C 0.081 3.919 8 C -0.057 4.057 9 C -0.120 4.120 10 C 0.564 3.436 11 O -0.542 6.542 12 N -0.701 5.701 13 C 0.125 3.875 14 H 0.105 0.895 15 C -0.142 4.142 16 C 0.077 3.923 17 H 0.072 0.928 18 O -0.554 6.554 19 C -0.186 4.186 20 C -0.112 4.112 21 C -0.072 4.072 22 C -0.063 4.063 23 H 0.374 0.626 24 H 0.115 0.885 25 H -0.260 1.260 26 H -0.256 1.256 27 H 0.176 0.824 28 H 0.422 0.578 29 H 0.136 0.864 30 H 0.408 0.592 31 H 0.084 0.916 32 H 0.110 0.890 33 H 0.385 0.615 34 H 0.099 0.901 35 H 0.077 0.923 36 H 0.128 0.872 37 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.536 0.249 0.743 0.950 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.078 4.078 9 C -0.124 4.124 10 C 0.352 3.648 11 O -0.420 6.420 12 N -0.354 5.354 13 C 0.019 3.981 14 H 0.123 0.877 15 C -0.180 4.180 16 C 0.018 3.982 17 H 0.090 0.910 18 O -0.360 6.360 19 C -0.225 4.225 20 C -0.132 4.132 21 C -0.091 4.091 22 C -0.068 4.068 23 H 0.221 0.779 24 H 0.133 0.867 25 H -0.185 1.185 26 H -0.181 1.181 27 H 0.193 0.807 28 H 0.259 0.741 29 H 0.153 0.847 30 H 0.246 0.754 31 H 0.102 0.898 32 H 0.128 0.872 33 H 0.234 0.766 34 H 0.118 0.882 35 H 0.096 0.904 36 H 0.145 0.855 37 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.429 0.826 0.563 1.744 hybrid contribution -1.696 -0.201 -0.774 1.875 sum -0.267 0.625 -0.211 0.712 Atomic orbital electron populations 1.86610 1.18079 1.79923 1.49059 1.24296 0.83376 1.09897 0.97260 0.95165 0.91507 0.74293 0.80490 1.20667 1.10598 0.92102 0.98060 1.21811 0.99819 0.94471 0.89429 1.41715 1.54688 1.04029 1.18175 1.18075 1.03263 0.86261 0.94920 1.20067 0.99540 0.88064 1.00171 1.19427 1.04871 0.92274 0.95866 1.18183 0.77356 0.84630 0.84623 1.90780 1.44793 1.86207 1.20218 1.45567 1.63591 1.04905 1.21332 1.21747 0.98267 0.81203 0.96841 0.87742 1.23456 0.94670 0.99705 1.00177 1.22797 0.94004 0.92343 0.89097 0.91046 1.86355 1.24297 1.62831 1.62545 1.24151 0.99048 1.01479 0.97834 1.20738 1.00314 0.97440 0.94667 1.20204 0.98749 0.90428 0.99698 1.19166 1.01024 0.93015 0.93577 0.77907 0.86714 1.18506 1.18072 0.80723 0.74055 0.84650 0.75371 0.89782 0.87175 0.76645 0.88224 0.90401 0.85467 0.85147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.72 12.88 -35.23 -0.45 -1.17 16 2 C -0.04 0.01 3.06 36.01 0.11 0.12 16 3 Si 0.68 -1.18 30.82 -169.99 -5.24 -6.41 16 4 C -0.21 -0.07 5.57 -102.74 -0.57 -0.64 16 5 C 0.07 -0.10 10.43 -16.78 -0.17 -0.28 16 6 N -0.58 0.52 6.07 -10.68 -0.06 0.46 16 7 C 0.08 0.15 7.26 -84.00 -0.61 -0.46 16 8 C -0.06 -0.15 9.61 -39.03 -0.37 -0.53 16 9 C -0.12 -0.35 5.87 -104.94 -0.62 -0.96 16 10 C 0.56 2.30 7.76 -12.45 -0.10 2.20 16 11 O -0.54 -3.97 15.91 5.29 0.08 -3.88 16 12 N -0.70 -1.16 5.10 -54.04 -0.28 -1.43 16 13 C 0.13 0.11 4.32 -67.12 -0.29 -0.18 16 14 H 0.10 0.22 7.46 -51.93 -0.39 -0.16 16 15 C -0.14 0.16 7.66 -25.91 -0.20 -0.04 16 16 C 0.08 -0.11 5.27 -25.92 -0.14 -0.25 16 17 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 18 O -0.55 0.64 12.32 -35.23 -0.43 0.20 16 19 C -0.19 0.10 7.71 -25.92 -0.20 -0.10 16 20 C -0.11 -0.15 9.46 -39.56 -0.37 -0.52 16 21 C -0.07 -0.12 10.03 -39.69 -0.40 -0.52 16 22 C -0.06 -0.13 6.35 -105.05 -0.67 -0.80 16 23 H 0.37 -0.55 8.70 45.56 0.40 -0.15 16 24 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 25 H -0.26 0.12 7.00 56.52 0.40 0.51 16 26 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 27 H 0.18 -0.73 6.27 -52.49 -0.33 -1.06 16 28 H 0.42 -1.52 8.96 -40.82 -0.37 -1.88 16 29 H 0.14 0.33 7.62 -52.49 -0.40 -0.07 16 30 H 0.41 0.15 5.58 -40.82 -0.23 -0.08 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 32 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 33 H 0.39 -1.73 9.12 45.56 0.42 -1.31 16 34 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.13 -0.09 6.36 -52.49 -0.33 -0.42 16 37 H 0.13 0.06 8.06 -52.48 -0.42 -0.36 16 LS Contribution 314.38 15.07 4.74 4.74 Total: 0.00 -9.15 314.38 -9.63 -18.78 By element: Atomic # 1 Polarization: -4.93 SS G_CDS: -3.39 Total: -8.31 kcal Atomic # 6 Polarization: 1.64 SS G_CDS: -4.60 Total: -2.96 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -0.34 Total: -0.97 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: -0.80 Total: -4.86 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.24 Total: -6.41 kcal Total LS contribution 4.74 Total: 4.74 kcal Total: -9.15 -9.63 -18.78 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335838.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.366 kcal (2) G-P(sol) polarization free energy of solvation -9.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.513 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds