Wall clock time and date at job start Sun Mar 7 2021 21:59:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47219 * 2 1 4 4 C 1.50703 * 109.46981 * 240.00270 * 2 1 3 5 5 C 1.34452 * 126.48193 * 105.00050 * 4 2 1 6 6 N 1.36572 * 109.98357 * 179.97438 * 5 4 2 7 7 C 1.37829 * 109.85831 * 0.02562 * 6 5 4 8 8 C 1.38649 * 133.37272 * 180.28097 * 7 6 5 9 9 C 1.39322 * 119.66280 * 180.19354 * 8 7 6 10 10 C 1.47579 * 119.83473 * 179.76703 * 9 8 7 11 11 O 1.21589 * 119.99762 * 359.72457 * 10 9 8 12 12 N 1.34776 * 119.99980 * 179.72333 * 10 9 8 13 13 C 1.46497 * 119.99532 * 179.97438 * 12 10 9 14 14 H 1.08999 * 112.91349 * 23.75050 * 13 12 10 15 15 C 1.53793 * 113.61160 * 155.00131 * 13 12 10 16 16 C 1.53781 * 87.07845 * 89.11793 * 15 13 12 17 17 H 1.09002 * 113.61228 * 139.98223 * 16 15 13 18 18 O 1.42901 * 113.61413 * 270.79882 * 16 15 13 19 19 C 1.53777 * 113.61724 * 252.49827 * 13 12 10 20 20 C 1.40209 * 120.33166 * 359.49155 * 9 8 7 21 21 C 1.36228 * 120.38081 * 0.25183 * 20 9 8 22 22 C 1.39874 * 119.96021 * 0.02562 * 21 20 9 23 23 H 0.96700 * 114.00091 * 59.99516 * 1 2 3 24 24 H 1.08997 * 109.47073 * 120.00063 * 2 1 3 25 25 H 1.48501 * 110.00097 * 298.68180 * 3 2 1 26 26 H 1.48499 * 109.99849 * 60.00148 * 3 2 1 27 27 H 1.07997 * 125.00816 * 359.97438 * 5 4 2 28 28 H 0.96994 * 125.06912 * 180.02562 * 6 5 4 29 29 H 1.07993 * 120.16928 * 359.95793 * 8 7 6 30 30 H 0.96998 * 119.99873 * 359.97438 * 12 10 9 31 31 H 1.09000 * 113.61258 * 334.56928 * 15 13 12 32 32 H 1.09001 * 113.68788 * 203.67855 * 15 13 12 33 33 H 0.96698 * 114.00171 * 178.47521 * 18 16 15 34 34 H 1.08999 * 113.61947 * 156.34089 * 19 13 12 35 35 H 1.08997 * 113.61348 * 25.43304 * 19 13 12 36 36 H 1.08001 * 119.80340 * 180.27756 * 20 9 8 37 37 H 1.08004 * 120.02025 * 180.02562 * 21 20 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.4616 -0.1362 -2.3246 6 7 2.8039 -1.0947 -3.2352 7 6 2.4949 -2.3431 -2.7396 8 6 2.6361 -3.6282 -3.2406 9 6 2.2128 -4.7154 -2.4793 10 6 2.3566 -6.0846 -3.0110 11 8 2.8389 -6.2612 -4.1130 12 7 1.9532 -7.1391 -2.2750 13 6 2.0955 -8.4982 -2.8031 14 1 2.8740 -8.5793 -3.5617 15 6 2.1848 -9.5773 -1.7110 16 6 0.6503 -9.6562 -1.7740 17 1 0.2620 -10.6722 -1.7018 18 8 -0.0066 -8.7469 -0.8887 19 6 0.7615 -9.1405 -3.2185 20 6 1.6560 -4.5158 -1.2080 21 6 1.5185 -3.2568 -0.7061 22 6 1.9335 -2.1547 -1.4608 23 1 -0.3933 0.4418 -0.7650 24 1 1.7923 -0.5138 0.8900 25 1 1.5879 2.4586 -1.2242 26 1 1.5615 2.4678 1.2085 27 1 2.5968 0.9263 -2.4628 28 1 3.2047 -0.9225 -4.1016 29 1 3.0686 -3.7853 -4.2176 30 1 1.5688 -6.9982 -1.3957 31 1 2.5641 -9.2050 -0.7594 32 1 2.6828 -10.4903 -2.0372 33 1 -0.9717 -8.7755 -0.9406 34 1 0.8703 -9.9337 -3.9581 35 1 -0.0082 -8.4157 -3.4838 36 1 1.3348 -5.3651 -0.6233 37 1 1.0892 -3.1098 0.2740 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12335838.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:50 Heat of formation + Delta-G solvation = -24.731485 kcal Electronic energy + Delta-G solvation = -22392.281988 eV Core-core repulsion = 18909.531974 eV Total energy + Delta-G solvation = -3482.750014 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 289.115 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.48346 -41.37712 -39.76414 -37.97237 -37.51414 -36.05577 -33.97061 -33.27351 -30.74644 -30.54257 -26.76811 -26.57224 -25.91701 -24.16411 -23.65820 -21.62339 -20.84226 -20.58766 -19.50448 -18.63318 -18.01070 -17.62042 -17.18535 -16.98966 -16.38985 -16.18410 -16.00343 -15.69574 -15.64813 -15.11757 -15.07492 -14.80395 -14.77431 -14.42976 -13.89700 -13.66171 -13.51813 -13.11125 -12.68373 -12.64037 -12.48826 -12.33295 -12.21958 -11.76918 -11.46425 -11.16015 -10.80594 -10.67996 -10.44789 -10.13065 -9.38382 -8.81243 -4.82568 -0.34731 0.35266 1.37554 1.40334 1.65098 1.85569 1.88477 2.05400 2.23436 2.83996 3.13207 3.48826 3.55675 3.57090 3.67091 3.77486 3.84729 3.87679 3.90347 4.10109 4.15545 4.28504 4.47883 4.51185 4.58769 4.70673 4.72418 4.79329 4.83090 4.87232 4.96623 4.97828 5.03827 5.20586 5.40093 5.46256 5.56331 5.60176 5.96400 6.46565 6.51330 6.62742 6.85397 7.11770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.050 4.050 3 Si 0.776 3.224 4 C -0.224 4.224 5 C 0.092 3.908 6 N -0.576 5.576 7 C 0.068 3.932 8 C -0.065 4.065 9 C -0.137 4.137 10 C 0.560 3.440 11 O -0.584 6.584 12 N -0.690 5.690 13 C 0.107 3.893 14 H 0.086 0.914 15 C -0.135 4.135 16 C 0.084 3.916 17 H 0.090 0.910 18 O -0.568 6.568 19 C -0.182 4.182 20 C -0.108 4.108 21 C -0.082 4.082 22 C -0.079 4.079 23 H 0.384 0.616 24 H 0.113 0.887 25 H -0.267 1.267 26 H -0.308 1.308 27 H 0.209 0.791 28 H 0.435 0.565 29 H 0.129 0.871 30 H 0.415 0.585 31 H 0.079 0.921 32 H 0.128 0.872 33 H 0.399 0.601 34 H 0.111 0.889 35 H 0.064 0.936 36 H 0.144 0.856 37 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.439 0.701 1.082 1.362 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.679 3.321 4 C -0.232 4.232 5 C -0.038 4.038 6 N -0.179 5.179 7 C -0.039 4.039 8 C -0.087 4.087 9 C -0.142 4.142 10 C 0.349 3.651 11 O -0.466 6.466 12 N -0.342 5.342 13 C 0.002 3.998 14 H 0.104 0.896 15 C -0.173 4.173 16 C 0.024 3.976 17 H 0.108 0.892 18 O -0.377 6.377 19 C -0.221 4.221 20 C -0.128 4.128 21 C -0.100 4.100 22 C -0.084 4.084 23 H 0.233 0.767 24 H 0.131 0.869 25 H -0.193 1.193 26 H -0.237 1.237 27 H 0.226 0.774 28 H 0.275 0.725 29 H 0.147 0.853 30 H 0.254 0.746 31 H 0.097 0.903 32 H 0.147 0.853 33 H 0.250 0.750 34 H 0.129 0.871 35 H 0.083 0.917 36 H 0.162 0.838 37 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.317 1.241 0.895 2.018 hybrid contribution -1.699 -0.302 -0.840 1.919 sum -0.382 0.939 0.055 1.015 Atomic orbital electron populations 1.86574 1.19180 1.80495 1.49917 1.24598 0.82718 1.11506 0.97055 0.94128 0.89943 0.70940 0.77049 1.20765 1.11988 0.91344 0.99087 1.22308 0.97557 0.95618 0.88274 1.41794 1.54095 1.03199 1.18834 1.18095 1.03808 0.86775 0.95220 1.20113 0.99751 0.88757 1.00054 1.19452 1.06243 0.91722 0.96760 1.18444 0.76882 0.85540 0.84234 1.90743 1.47060 1.86821 1.21999 1.45537 1.62508 1.04919 1.21219 1.21956 0.98843 0.81338 0.97697 0.89614 1.23493 0.95387 0.99426 0.98993 1.22780 0.93719 0.93039 0.88029 0.89174 1.86319 1.25715 1.63109 1.62518 1.24153 0.97503 1.01335 0.99106 1.20861 0.99723 0.98084 0.94098 1.20383 0.98974 0.90517 1.00168 1.19540 1.00864 0.94199 0.93779 0.76743 0.86947 1.19293 1.23666 0.77448 0.72516 0.85265 0.74581 0.90269 0.85346 0.75020 0.87054 0.91692 0.83822 0.84280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.56 12.88 -148.98 -1.92 -3.48 16 2 C -0.05 0.04 3.06 71.24 0.22 0.26 16 3 Si 0.78 -3.46 30.82 68.60 2.11 -1.34 16 4 C -0.22 -0.03 5.57 -18.64 -0.10 -0.14 16 5 C 0.09 -0.39 10.43 83.09 0.87 0.47 16 6 N -0.58 1.40 6.07 -187.71 -1.14 0.27 16 7 C 0.07 0.29 7.26 38.96 0.28 0.57 16 8 C -0.07 -0.47 9.61 22.63 0.22 -0.25 16 9 C -0.14 -1.05 5.87 -20.07 -0.12 -1.16 16 10 C 0.56 5.82 7.76 86.71 0.67 6.50 16 11 O -0.58 -10.28 15.91 -4.00 -0.06 -10.34 16 12 N -0.69 -3.30 5.10 -443.15 -2.26 -5.56 16 13 C 0.11 0.31 4.32 45.52 0.20 0.51 16 14 H 0.09 0.56 7.46 -2.39 -0.02 0.55 16 15 C -0.14 0.32 7.66 31.12 0.24 0.56 16 16 C 0.08 -0.29 5.27 31.12 0.16 -0.13 16 17 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 18 O -0.57 1.57 12.32 -148.98 -1.84 -0.26 16 19 C -0.18 0.12 7.71 31.12 0.24 0.36 16 20 C -0.11 -0.40 9.46 22.28 0.21 -0.19 16 21 C -0.08 -0.33 10.03 22.20 0.22 -0.11 16 22 C -0.08 -0.37 6.35 -20.14 -0.13 -0.49 16 23 H 0.38 -1.18 8.70 -74.06 -0.64 -1.83 16 24 H 0.11 -0.11 7.96 -2.39 -0.02 -0.13 16 25 H -0.27 0.86 7.00 99.48 0.70 1.56 16 26 H -0.31 -1.37 7.11 99.48 0.71 -0.66 16 27 H 0.21 -2.37 6.27 -2.91 -0.02 -2.38 16 28 H 0.43 -3.48 8.96 -92.71 -0.83 -4.31 16 29 H 0.13 0.96 7.62 -2.91 -0.02 0.94 16 30 H 0.41 0.67 5.58 -92.71 -0.52 0.15 16 31 H 0.08 -0.09 8.14 -2.39 -0.02 -0.10 16 32 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 33 H 0.40 -3.81 9.12 -74.06 -0.68 -4.48 16 34 H 0.11 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 36 H 0.14 -0.12 6.36 -2.91 -0.02 -0.14 16 37 H 0.14 0.21 8.06 -2.91 -0.02 0.19 16 Total: 0.00 -22.92 314.38 -3.40 -26.32 By element: Atomic # 1 Polarization: -10.89 SS G_CDS: -1.48 Total: -12.37 kcal Atomic # 6 Polarization: 3.58 SS G_CDS: 3.18 Total: 6.76 kcal Atomic # 7 Polarization: -1.89 SS G_CDS: -3.40 Total: -5.29 kcal Atomic # 8 Polarization: -10.26 SS G_CDS: -3.82 Total: -14.08 kcal Atomic # 14 Polarization: -3.46 SS G_CDS: 2.11 Total: -1.34 kcal Total: -22.92 -3.40 -26.32 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335838.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.590 kcal (2) G-P(sol) polarization free energy of solvation -22.917 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.327 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.321 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds