Wall clock time and date at job start Sun Mar 7 2021 21:59:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.34847 * 125.90353 * 2 1 4 4 C 1.40944 * 107.46867 * 180.02562 * 3 2 1 5 5 C 1.50701 * 126.26793 * 180.02562 * 4 3 2 6 6 O 1.42898 * 109.47346 * 104.97167 * 5 4 3 7 7 Si 1.86303 * 109.47015 * 344.97234 * 5 4 3 8 8 C 1.34854 * 107.46574 * 359.77048 * 4 3 2 9 9 C 1.50703 * 125.90021 * 180.23837 * 8 4 3 10 10 N 1.36562 * 108.20064 * 0.37025 * 8 4 3 11 11 C 1.40225 * 125.66685 * 179.89232 * 10 8 4 12 12 C 1.38905 * 120.00015 * 89.71556 * 11 10 8 13 13 C 1.50706 * 119.88164 * 359.69647 * 12 11 10 14 14 C 1.38261 * 120.22942 * 179.72087 * 12 11 10 15 15 C 1.37971 * 120.21905 * 0.02562 * 14 12 11 16 16 C 1.39614 * 119.98649 * 359.97438 * 15 14 12 17 17 C 1.47862 * 120.11449 * 179.97438 * 16 15 14 18 18 O 1.21556 * 119.99726 * 180.02562 * 17 16 15 19 19 N 1.34773 * 120.00117 * 0.02562 * 17 16 15 20 20 C 1.46495 * 119.99984 * 179.97438 * 19 17 16 21 21 H 1.08997 * 112.85490 * 336.20331 * 20 19 17 22 22 C 1.53785 * 113.61223 * 107.50830 * 20 19 17 23 23 C 1.53775 * 87.08278 * 89.11401 * 22 20 19 24 24 H 1.09001 * 113.69140 * 139.99198 * 23 22 20 25 25 O 1.42903 * 113.61973 * 270.88662 * 23 22 20 26 26 C 1.53781 * 87.08419 * 25.43408 * 23 22 20 27 27 C 1.38599 * 119.99042 * 269.43419 * 11 10 8 28 28 H 1.09008 * 109.46978 * 269.95670 * 1 2 3 29 29 H 1.09003 * 109.47242 * 29.94807 * 1 2 3 30 30 H 1.09000 * 109.47501 * 149.95796 * 1 2 3 31 31 H 1.07997 * 126.26640 * 0.02562 * 3 2 1 32 32 H 1.09000 * 109.46851 * 224.97909 * 5 4 3 33 33 H 0.96693 * 114.00008 * 300.00222 * 6 5 4 34 34 H 1.48498 * 110.00059 * 180.02562 * 7 5 4 35 35 H 1.48506 * 110.00004 * 301.32371 * 7 5 4 36 36 H 1.09003 * 109.47028 * 270.15517 * 9 8 4 37 37 H 1.08997 * 109.47008 * 30.15060 * 9 8 4 38 38 H 1.09000 * 109.47266 * 150.15053 * 9 8 4 39 39 H 1.09001 * 109.46823 * 90.00539 * 13 12 11 40 40 H 1.09003 * 109.46803 * 210.00208 * 13 12 11 41 41 H 1.09002 * 109.46831 * 330.00081 * 13 12 11 42 42 H 1.08005 * 119.88988 * 179.97438 * 14 12 11 43 43 H 1.08005 * 120.00932 * 180.02562 * 15 14 12 44 44 H 0.97005 * 120.00036 * 0.02562 * 19 17 16 45 45 H 1.09000 * 113.61270 * 203.66636 * 22 20 19 46 46 H 1.09000 * 113.61130 * 334.56773 * 22 20 19 47 47 H 0.96700 * 113.99482 * 277.49693 * 25 23 22 48 48 H 1.09003 * 113.61864 * 220.02432 * 26 23 22 49 49 H 1.09003 * 113.61585 * 89.11116 * 26 23 22 50 50 H 1.07999 * 120.10425 * 0.25872 * 27 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2977 1.0923 0.0000 4 6 3.6348 0.6466 -0.0006 5 6 4.8648 1.5173 -0.0003 6 8 5.4550 1.5076 1.3011 7 14 4.3913 3.2610 -0.4544 8 6 3.6120 -0.7018 0.0042 9 6 4.8176 -1.6060 0.0105 10 7 2.3077 -1.1063 -0.0006 11 6 1.8643 -2.4366 -0.0001 12 6 1.6452 -3.0952 1.2032 13 6 1.8914 -2.3796 2.5065 14 6 1.2025 -4.4050 1.2093 15 6 0.9758 -5.0669 0.0201 16 6 1.1931 -4.4137 -1.1945 17 6 0.9516 -5.1206 -2.4706 18 8 1.1419 -4.5500 -3.5269 19 7 0.5206 -6.3975 -2.4625 20 6 0.2808 -7.0977 -3.7268 21 1 0.0801 -6.4185 -4.5553 22 6 1.3367 -8.1687 -4.0476 23 6 0.4542 -9.1593 -3.2701 24 1 0.3935 -10.1458 -3.7297 25 8 0.7500 -9.2153 -1.8732 26 6 -0.7352 -8.2464 -3.6118 27 6 1.6391 -3.0924 -1.2002 28 1 -0.3633 -0.0008 1.0277 29 1 -0.3634 0.8905 -0.5130 30 1 -0.3634 -0.8896 -0.5145 31 1 1.9670 2.1204 0.0004 32 1 5.5812 1.1344 -0.7271 33 1 4.8726 1.8362 1.9995 34 1 5.5956 4.1298 -0.4582 35 1 3.7473 3.2804 -1.7924 36 1 5.1126 -1.8254 -1.0156 37 1 5.6401 -1.1112 0.5270 38 1 4.5723 -2.5352 0.5247 39 1 0.9773 -1.8777 2.8237 40 1 2.1921 -3.1013 3.2660 41 1 2.6830 -1.6424 2.3722 42 1 1.0343 -4.9119 2.1480 43 1 0.6296 -6.0900 0.0289 44 1 0.3684 -6.8528 -1.6195 45 1 1.4179 -8.3972 -5.1103 46 1 2.3030 -7.9835 -3.5784 47 1 1.4972 -9.7880 -1.6521 48 1 -1.4416 -8.1238 -2.7907 49 1 -1.2204 -8.4961 -4.5553 50 1 1.8086 -2.5817 -2.1366 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12335842.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:54 Heat of formation + Delta-G solvation = -11.070441 kcal Electronic energy + Delta-G solvation = -32314.780898 eV Core-core repulsion = 28082.246655 eV Total energy + Delta-G solvation = -4232.534243 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.86191 -41.57009 -40.38530 -39.17231 -37.54861 -36.19600 -34.82909 -33.72148 -33.56079 -33.51185 -30.59291 -30.08041 -28.73059 -27.08041 -26.92505 -25.66142 -24.60395 -23.69989 -23.63535 -21.97121 -20.87157 -20.70508 -20.25995 -18.88098 -18.21356 -17.63218 -17.37734 -17.25083 -16.85776 -16.62756 -16.25021 -15.90942 -15.86250 -15.57404 -15.24443 -15.14609 -14.94371 -14.79890 -14.75466 -14.53517 -14.17148 -14.05536 -13.83238 -13.80304 -13.73020 -13.50050 -13.32290 -13.16717 -13.12980 -13.02395 -12.82188 -12.71189 -12.61833 -12.44736 -12.40412 -11.87114 -11.65107 -11.61339 -11.04698 -10.86643 -10.28849 -10.17738 -10.11792 -9.89808 -9.57921 -8.68427 -4.82118 -0.44478 -0.03824 1.19549 1.56574 1.65230 1.76777 1.86924 1.97998 2.06191 2.20463 2.56309 2.86923 3.33449 3.42088 3.54723 3.58645 3.68840 3.71156 3.76472 3.76900 3.84817 3.97555 4.07289 4.09340 4.21541 4.35241 4.42677 4.46757 4.47954 4.52015 4.52312 4.55301 4.64200 4.67295 4.68011 4.70806 4.73288 4.78476 4.80274 4.84589 4.87024 4.92430 4.99915 5.02368 5.03581 5.11262 5.21370 5.26440 5.44844 5.48337 5.52903 6.11962 6.28533 6.40185 6.50829 6.58258 6.82178 7.15319 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.029 3.971 3 C -0.186 4.186 4 C -0.197 4.197 5 C -0.031 4.031 6 O -0.546 6.546 7 Si 0.695 3.305 8 C 0.056 3.944 9 C -0.089 4.089 10 N -0.400 5.400 11 C 0.101 3.899 12 C -0.040 4.040 13 C -0.123 4.123 14 C -0.120 4.120 15 C -0.068 4.068 16 C -0.134 4.134 17 C 0.562 3.438 18 O -0.534 6.534 19 N -0.701 5.701 20 C 0.124 3.876 21 H 0.106 0.894 22 C -0.185 4.185 23 C 0.077 3.923 24 H 0.073 0.927 25 O -0.555 6.555 26 C -0.142 4.142 27 C -0.040 4.040 28 H 0.072 0.928 29 H 0.082 0.918 30 H 0.061 0.939 31 H 0.145 0.855 32 H 0.104 0.896 33 H 0.376 0.624 34 H -0.262 1.262 35 H -0.260 1.260 36 H 0.069 0.931 37 H 0.089 0.911 38 H 0.061 0.939 39 H 0.080 0.920 40 H 0.076 0.924 41 H 0.075 0.925 42 H 0.141 0.859 43 H 0.135 0.865 44 H 0.407 0.593 45 H 0.101 0.899 46 H 0.077 0.923 47 H 0.386 0.614 48 H 0.083 0.917 49 H 0.111 0.889 50 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.470 -4.935 3.991 7.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.079 4.079 3 C -0.210 4.210 4 C -0.203 4.203 5 C -0.143 4.143 6 O -0.351 6.351 7 Si 0.597 3.403 8 C -0.054 4.054 9 C -0.147 4.147 10 N -0.076 5.076 11 C 0.012 3.988 12 C -0.041 4.041 13 C -0.179 4.179 14 C -0.138 4.138 15 C -0.086 4.086 16 C -0.137 4.137 17 C 0.349 3.651 18 O -0.411 6.411 19 N -0.353 5.353 20 C 0.018 3.982 21 H 0.124 0.876 22 C -0.224 4.224 23 C 0.018 3.982 24 H 0.091 0.909 25 O -0.362 6.362 26 C -0.180 4.180 27 C -0.060 4.060 28 H 0.090 0.910 29 H 0.101 0.899 30 H 0.080 0.920 31 H 0.163 0.837 32 H 0.121 0.879 33 H 0.223 0.777 34 H -0.187 1.187 35 H -0.185 1.185 36 H 0.088 0.912 37 H 0.107 0.893 38 H 0.080 0.920 39 H 0.099 0.901 40 H 0.095 0.905 41 H 0.094 0.906 42 H 0.158 0.842 43 H 0.153 0.847 44 H 0.245 0.755 45 H 0.119 0.881 46 H 0.096 0.904 47 H 0.234 0.766 48 H 0.102 0.898 49 H 0.129 0.871 50 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -3.345 -4.007 2.341 5.720 hybrid contribution 0.519 -1.386 0.031 1.480 sum -2.826 -5.392 2.372 6.534 Atomic orbital electron populations 1.20323 0.88012 1.03307 1.02664 1.20366 0.93380 0.84815 1.09329 1.20530 0.91769 0.97463 1.11221 1.19595 0.94853 0.92568 1.13320 1.24302 0.93723 1.08044 0.88182 1.86453 1.43370 1.88698 1.16613 0.94717 0.83389 0.76882 0.85275 1.20240 0.83795 0.93882 1.07468 1.20374 0.93927 0.97708 1.02651 1.41271 1.05520 1.02592 1.58205 1.17292 1.04359 0.84231 0.92871 1.20327 0.94781 0.94163 0.94824 1.20903 1.03198 1.00775 0.93068 1.20972 1.00519 0.93595 0.98728 1.21458 0.95908 0.99803 0.91451 1.19727 1.05916 0.94826 0.93256 1.18176 0.76824 0.81457 0.88660 1.90808 1.51290 1.66754 1.32239 1.45556 1.67683 1.12514 1.09568 1.21785 0.95859 0.93176 0.87333 0.87648 1.24145 0.99287 0.97138 1.01839 1.22802 0.96047 0.97546 0.81834 0.90898 1.86337 1.55336 1.71794 1.22706 1.23466 0.96526 0.94519 1.03454 1.21339 0.93592 0.93038 0.97996 0.90971 0.89894 0.91985 0.83749 0.87856 0.77668 1.18682 1.18453 0.91230 0.89263 0.91977 0.90136 0.90545 0.90565 0.84157 0.84725 0.75495 0.88102 0.90385 0.76581 0.89787 0.87057 0.84019 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.01 10.09 36.00 0.36 0.37 16 2 C 0.03 0.06 6.86 -81.69 -0.56 -0.50 16 3 C -0.19 -0.31 9.27 -39.76 -0.37 -0.68 16 4 C -0.20 -0.47 5.35 -104.80 -0.56 -1.03 16 5 C -0.03 -0.05 2.50 36.01 0.09 0.04 16 6 O -0.55 -0.89 12.88 -35.23 -0.45 -1.35 16 7 Si 0.69 0.62 30.81 -169.99 -5.24 -4.62 16 8 C 0.06 0.15 6.29 -81.68 -0.51 -0.36 16 9 C -0.09 -0.15 9.87 36.01 0.36 0.20 16 10 N -0.40 -0.92 1.87 -52.61 -0.10 -1.02 16 11 C 0.10 0.17 4.49 -83.64 -0.38 -0.20 16 12 C -0.04 0.00 5.90 -104.36 -0.62 -0.62 16 13 C -0.12 0.13 9.76 36.01 0.35 0.48 16 14 C -0.12 0.16 9.67 -39.67 -0.38 -0.22 16 15 C -0.07 0.07 9.54 -39.17 -0.37 -0.31 16 16 C -0.13 -0.21 5.87 -104.99 -0.62 -0.83 16 17 C 0.56 1.75 7.77 -12.32 -0.10 1.66 16 18 O -0.53 -3.68 15.94 5.32 0.08 -3.59 16 19 N -0.70 -0.38 5.10 -53.95 -0.28 -0.65 16 20 C 0.12 0.01 4.32 -67.11 -0.29 -0.28 16 21 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 22 C -0.19 0.23 7.71 -25.92 -0.20 0.03 16 23 C 0.08 -0.17 5.28 -25.92 -0.14 -0.31 16 24 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 25 O -0.56 1.22 12.31 -35.23 -0.43 0.79 16 26 C -0.14 0.27 7.66 -25.91 -0.20 0.07 16 27 C -0.04 -0.10 9.51 -38.99 -0.37 -0.47 16 28 H 0.07 -0.08 8.14 -51.92 -0.42 -0.51 16 29 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.06 0.04 7.83 -51.93 -0.41 -0.37 16 31 H 0.15 -0.06 6.59 -52.49 -0.35 -0.41 16 32 H 0.10 0.25 7.96 -51.93 -0.41 -0.16 16 33 H 0.38 -0.74 8.70 45.56 0.40 -0.35 16 34 H -0.26 -1.02 7.11 56.52 0.40 -0.62 16 35 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 37 H 0.09 0.15 7.87 -51.93 -0.41 -0.26 16 38 H 0.06 0.08 7.83 -51.93 -0.41 -0.32 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.08 -0.18 8.08 -51.93 -0.42 -0.60 16 41 H 0.08 0.03 6.96 -51.93 -0.36 -0.33 16 42 H 0.14 -0.51 8.06 -52.48 -0.42 -0.94 16 43 H 0.14 -0.44 6.40 -52.48 -0.34 -0.77 16 44 H 0.41 -0.44 5.62 -40.82 -0.23 -0.67 16 45 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 46 H 0.08 -0.01 8.14 -51.93 -0.42 -0.44 16 47 H 0.39 -2.13 9.12 45.56 0.42 -1.72 16 48 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 49 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 50 H 0.14 0.59 7.65 -52.49 -0.40 0.19 16 LS Contribution 410.28 15.07 6.18 6.18 Total: 0.00 -8.84 410.28 -11.46 -20.30 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -6.73 Total: -13.09 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: -4.50 Total: -2.96 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.37 Total: -1.67 kcal Atomic # 8 Polarization: -3.34 SS G_CDS: -0.80 Total: -4.15 kcal Atomic # 14 Polarization: 0.62 SS G_CDS: -5.24 Total: -4.62 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -8.84 -11.46 -20.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335842.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.233 kcal (2) G-P(sol) polarization free energy of solvation -8.840 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.393 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.463 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds