Wall clock time and date at job start Sun Mar 7 2021 21:59:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.34851 * 125.89820 * 2 1 4 4 C 1.40943 * 107.46605 * 179.97438 * 3 2 1 5 5 C 1.50702 * 126.26614 * 180.02562 * 4 3 2 6 6 O 1.42902 * 109.46773 * 254.99948 * 5 4 3 7 7 Si 1.86299 * 109.47105 * 15.00098 * 5 4 3 8 8 C 1.34852 * 107.46493 * 0.02562 * 4 3 2 9 9 C 1.50703 * 125.89723 * 179.97438 * 8 4 3 10 10 N 1.36559 * 125.90113 * 180.26990 * 2 1 3 11 11 C 1.40229 * 125.66743 * 0.05361 * 10 2 1 12 12 C 1.38552 * 119.99304 * 64.89492 * 11 10 2 13 13 C 1.39501 * 119.78434 * 179.76820 * 12 11 10 14 14 C 1.47859 * 120.11527 * 180.22993 * 13 12 11 15 15 O 1.21553 * 119.99930 * 0.25701 * 14 13 12 16 16 N 1.34777 * 120.00302 * 180.25191 * 14 13 12 17 17 C 1.46501 * 120.00114 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.84638 * 336.19897 * 17 16 14 19 19 C 1.53774 * 113.61212 * 107.50311 * 17 16 14 20 20 C 1.53786 * 87.07888 * 89.11810 * 19 17 16 21 21 H 1.08996 * 113.69209 * 139.99354 * 20 19 17 22 22 O 1.42906 * 113.61360 * 270.88138 * 20 19 17 23 23 C 1.53776 * 87.08292 * 25.43196 * 20 19 17 24 24 C 1.39576 * 119.77279 * 0.48423 * 13 12 11 25 25 C 1.38021 * 119.98812 * 359.76974 * 24 13 12 26 26 C 1.38215 * 120.21370 * 359.97438 * 25 24 13 27 27 H 1.08997 * 109.47345 * 90.01958 * 1 2 3 28 28 H 1.09001 * 109.47256 * 210.02837 * 1 2 3 29 29 H 1.09003 * 109.46982 * 330.01766 * 1 2 3 30 30 H 1.07997 * 126.26668 * 359.94446 * 3 2 1 31 31 H 1.09000 * 109.46914 * 135.00305 * 5 4 3 32 32 H 0.96700 * 113.99701 * 60.00265 * 6 5 4 33 33 H 1.48502 * 110.00035 * 58.68172 * 7 5 4 34 34 H 1.48497 * 109.99993 * 179.97438 * 7 5 4 35 35 H 1.09002 * 109.47152 * 90.02525 * 9 8 4 36 36 H 1.09001 * 109.46980 * 330.02625 * 9 8 4 37 37 H 1.09004 * 109.47113 * 210.02606 * 9 8 4 38 38 H 1.07996 * 120.10772 * 0.02562 * 12 11 10 39 39 H 0.97003 * 119.99709 * 0.02562 * 16 14 13 40 40 H 1.08996 * 113.61585 * 203.66425 * 19 17 16 41 41 H 1.08997 * 113.62170 * 334.57178 * 19 17 16 42 42 H 0.96704 * 113.99666 * 277.49756 * 22 20 19 43 43 H 1.08998 * 113.61672 * 220.02133 * 23 20 19 44 44 H 1.09001 * 113.61654 * 89.11521 * 23 20 19 45 45 H 1.07999 * 120.01036 * 179.78674 * 24 13 12 46 46 H 1.07999 * 119.89308 * 180.02562 * 25 24 13 47 47 H 1.07998 * 119.88634 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6467 0.0006 5 6 4.8647 1.5176 0.0014 6 8 5.4556 1.5085 -1.2998 7 14 4.3909 3.2610 0.4560 8 6 3.6121 -0.7016 0.0004 9 6 4.8178 -1.6057 0.0003 10 7 2.3078 -1.1062 -0.0052 11 6 1.8644 -2.4365 -0.0125 12 6 1.1632 -2.9269 -1.1023 13 6 0.7284 -4.2524 -1.1071 14 6 -0.0160 -4.7848 -2.2684 15 8 -0.2460 -4.0685 -3.2231 16 7 -0.4394 -6.0643 -2.2684 17 6 -1.1765 -6.5919 -3.4193 18 1 -1.6721 -5.8124 -3.9980 19 6 -0.3598 -7.5731 -4.2766 20 6 -0.8866 -8.6898 -3.3598 21 1 -1.1479 -9.6053 -3.8904 22 8 -0.0637 -8.9271 -2.2158 23 6 -2.0917 -7.7784 -3.0734 24 6 0.9939 -5.0729 -0.0096 25 6 1.6886 -4.5731 1.0733 26 6 2.1238 -3.2613 1.0753 27 1 -0.3634 -0.0004 -1.0276 28 1 -0.3634 -0.8897 0.5143 29 1 -0.3633 0.8902 0.5136 30 1 1.9669 2.1204 -0.0008 31 1 5.5808 1.1344 0.7283 32 1 4.8735 1.8374 -1.9984 33 1 3.7463 3.2797 1.7937 34 1 5.5952 4.1298 0.4609 35 1 5.1081 -1.8242 1.0279 36 1 5.6425 -1.1113 -0.5130 37 1 4.5747 -2.5355 -0.5141 38 1 0.9576 -2.2862 -1.9470 39 1 -0.2561 -6.6358 -1.5064 40 1 -0.7111 -7.6509 -5.3055 41 1 0.7174 -7.4224 -4.2064 42 1 0.6959 -9.4997 -2.3897 43 1 -2.4125 -7.7932 -2.0318 44 1 -2.9164 -7.9122 -3.7734 45 1 0.6561 -6.0986 -0.0077 46 1 1.8935 -5.2094 1.9215 47 1 2.6672 -2.8758 1.9252 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12335854.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:59 Heat of formation + Delta-G solvation = -6.602437 kcal Electronic energy + Delta-G solvation = -29832.698117 eV Core-core repulsion = 25755.895240 eV Total energy + Delta-G solvation = -4076.802877 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.81673 -41.58027 -40.32288 -39.05345 -37.55274 -36.20113 -34.64371 -33.69791 -33.59483 -32.27898 -30.38075 -30.09739 -27.13011 -26.92904 -26.30314 -24.78945 -24.33459 -23.66373 -22.00578 -20.97447 -20.71960 -20.31131 -18.88963 -18.26547 -17.58470 -17.38942 -17.33362 -17.14652 -16.63571 -16.36191 -15.95850 -15.91845 -15.51841 -15.21308 -15.16198 -14.98369 -14.78352 -14.63955 -14.26468 -14.11521 -13.89052 -13.83885 -13.75910 -13.50849 -13.40334 -13.26708 -13.16717 -12.93945 -12.78209 -12.66202 -12.45770 -12.43457 -11.90083 -11.66656 -11.61836 -11.06262 -10.87052 -10.44854 -10.31781 -10.16500 -10.05983 -9.43565 -8.71455 -4.82618 -0.46012 -0.07518 1.19022 1.54856 1.68497 1.72571 1.86001 1.95619 2.03320 2.17994 2.57221 2.86530 3.33066 3.42872 3.60148 3.60870 3.67423 3.70999 3.75750 3.83882 3.88012 3.97423 4.05516 4.13353 4.19150 4.37848 4.41818 4.46830 4.51808 4.54999 4.60914 4.65431 4.68024 4.70249 4.72642 4.75417 4.77626 4.84466 4.86816 4.96763 5.01473 5.04445 5.05809 5.08471 5.25637 5.41643 5.45839 5.50881 6.08904 6.25757 6.39193 6.49761 6.53984 6.82057 7.13231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.027 3.973 3 C -0.185 4.185 4 C -0.195 4.195 5 C -0.031 4.031 6 O -0.546 6.546 7 Si 0.695 3.305 8 C 0.053 3.947 9 C -0.089 4.089 10 N -0.403 5.403 11 C 0.111 3.889 12 C -0.049 4.049 13 C -0.122 4.122 14 C 0.561 3.439 15 O -0.532 6.532 16 N -0.700 5.700 17 C 0.124 3.876 18 H 0.106 0.894 19 C -0.185 4.185 20 C 0.077 3.923 21 H 0.073 0.927 22 O -0.556 6.556 23 C -0.142 4.142 24 C -0.077 4.077 25 C -0.111 4.111 26 C -0.084 4.084 27 H 0.074 0.926 28 H 0.062 0.938 29 H 0.083 0.917 30 H 0.146 0.854 31 H 0.104 0.896 32 H 0.377 0.623 33 H -0.260 1.260 34 H -0.261 1.261 35 H 0.069 0.931 36 H 0.089 0.911 37 H 0.062 0.938 38 H 0.144 0.856 39 H 0.408 0.592 40 H 0.101 0.899 41 H 0.078 0.922 42 H 0.386 0.614 43 H 0.083 0.917 44 H 0.111 0.889 45 H 0.135 0.865 46 H 0.141 0.859 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.685 -5.392 0.458 6.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.080 4.080 3 C -0.209 4.209 4 C -0.202 4.202 5 C -0.143 4.143 6 O -0.352 6.352 7 Si 0.598 3.402 8 C -0.057 4.057 9 C -0.146 4.146 10 N -0.078 5.078 11 C 0.022 3.978 12 C -0.069 4.069 13 C -0.126 4.126 14 C 0.348 3.652 15 O -0.409 6.409 16 N -0.353 5.353 17 C 0.019 3.981 18 H 0.124 0.876 19 C -0.224 4.224 20 C 0.017 3.983 21 H 0.091 0.909 22 O -0.362 6.362 23 C -0.180 4.180 24 C -0.096 4.096 25 C -0.130 4.130 26 C -0.103 4.103 27 H 0.093 0.907 28 H 0.081 0.919 29 H 0.102 0.898 30 H 0.164 0.836 31 H 0.122 0.878 32 H 0.225 0.775 33 H -0.184 1.184 34 H -0.186 1.186 35 H 0.088 0.912 36 H 0.108 0.892 37 H 0.081 0.919 38 H 0.161 0.839 39 H 0.245 0.755 40 H 0.119 0.881 41 H 0.096 0.904 42 H 0.234 0.766 43 H 0.102 0.898 44 H 0.130 0.870 45 H 0.153 0.847 46 H 0.159 0.841 47 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -2.801 -4.373 0.959 5.281 hybrid contribution 0.643 -1.366 0.301 1.539 sum -2.158 -5.739 1.261 6.260 Atomic orbital electron populations 1.20358 0.87834 1.03295 1.02968 1.20408 0.93495 0.84839 1.09303 1.20560 0.91769 0.97538 1.10993 1.19631 0.94914 0.92607 1.13022 1.24317 0.93656 1.08068 0.88272 1.86452 1.43373 1.88708 1.16624 0.94616 0.83482 0.76933 0.85181 1.20260 0.83751 0.93986 1.07661 1.20383 0.93912 0.97818 1.02507 1.41401 1.05715 1.02738 1.57968 1.17521 1.01225 0.83914 0.95151 1.21268 0.94368 0.94464 0.96821 1.19765 1.02735 0.94504 0.95568 1.18169 0.78811 0.81792 0.86427 1.90808 1.56490 1.58009 1.35587 1.45564 1.56912 1.11758 1.21054 1.21789 0.93013 0.95642 0.87705 0.87596 1.24144 1.01726 0.96947 0.99584 1.22807 0.91959 0.96581 0.86910 0.90896 1.86337 1.42564 1.72732 1.34560 1.23464 0.96459 0.94055 1.03991 1.21480 0.96124 0.99635 0.92378 1.21056 0.98084 0.94921 0.98908 1.21452 0.98270 0.93891 0.96735 0.90724 0.91939 0.89811 0.83635 0.87837 0.77546 1.18440 1.18617 0.91197 0.89237 0.91872 0.83852 0.75476 0.88076 0.90370 0.76571 0.89792 0.87040 0.84712 0.84108 0.84752 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.02 9.92 36.01 0.36 0.33 16 2 C 0.03 0.06 6.81 -81.69 -0.56 -0.49 16 3 C -0.18 -0.36 9.27 -39.76 -0.37 -0.72 16 4 C -0.20 -0.49 5.35 -104.80 -0.56 -1.05 16 5 C -0.03 -0.05 2.50 36.01 0.09 0.04 16 6 O -0.55 -1.11 12.88 -35.23 -0.45 -1.57 16 7 Si 0.70 0.55 30.81 -169.99 -5.24 -4.69 16 8 C 0.05 0.15 6.81 -81.69 -0.56 -0.41 16 9 C -0.09 -0.11 9.72 36.01 0.35 0.24 16 10 N -0.40 -1.03 2.79 -52.61 -0.15 -1.17 16 11 C 0.11 0.18 4.66 -83.63 -0.39 -0.21 16 12 C -0.05 -0.10 9.26 -39.00 -0.36 -0.46 16 13 C -0.12 -0.14 5.87 -104.99 -0.62 -0.76 16 14 C 0.56 1.50 7.77 -12.32 -0.10 1.41 16 15 O -0.53 -3.35 15.94 5.32 0.08 -3.26 16 16 N -0.70 -0.15 5.10 -53.96 -0.28 -0.42 16 17 C 0.12 -0.03 4.32 -67.12 -0.29 -0.32 16 18 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 19 C -0.19 0.28 7.71 -25.92 -0.20 0.08 16 20 C 0.08 -0.19 5.28 -25.92 -0.14 -0.32 16 21 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 22 O -0.56 1.31 12.31 -35.23 -0.43 0.88 16 23 C -0.14 0.30 7.66 -25.92 -0.20 0.11 16 24 C -0.08 0.10 9.54 -39.16 -0.37 -0.27 16 25 C -0.11 0.19 10.02 -39.67 -0.40 -0.21 16 26 C -0.08 0.01 9.72 -39.33 -0.38 -0.37 16 27 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 28 H 0.06 0.03 7.84 -51.93 -0.41 -0.38 16 29 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 30 H 0.15 -0.04 6.59 -52.49 -0.35 -0.39 16 31 H 0.10 0.21 7.96 -51.93 -0.41 -0.20 16 32 H 0.38 -0.51 8.70 45.56 0.40 -0.11 16 33 H -0.26 -0.89 7.11 56.52 0.40 -0.49 16 34 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.09 0.15 7.87 -51.93 -0.41 -0.26 16 37 H 0.06 0.07 7.83 -51.93 -0.41 -0.33 16 38 H 0.14 0.48 7.65 -52.49 -0.40 0.08 16 39 H 0.41 -0.55 5.62 -40.82 -0.23 -0.78 16 40 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 41 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 42 H 0.39 -2.18 9.12 45.56 0.42 -1.77 16 43 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 44 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 45 H 0.14 -0.47 6.40 -52.49 -0.34 -0.81 16 46 H 0.14 -0.57 8.06 -52.49 -0.42 -1.00 16 47 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 LS Contribution 390.53 15.07 5.89 5.89 Total: 0.00 -8.90 390.53 -11.21 -20.12 By element: Atomic # 1 Polarization: -6.41 SS G_CDS: -5.95 Total: -12.36 kcal Atomic # 6 Polarization: 1.28 SS G_CDS: -4.69 Total: -3.41 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.42 Total: -1.59 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.80 Total: -3.95 kcal Atomic # 14 Polarization: 0.55 SS G_CDS: -5.24 Total: -4.69 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.90 -11.21 -20.12 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335854.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.514 kcal (2) G-P(sol) polarization free energy of solvation -8.904 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.602 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds