Wall clock time and date at job start Sun Mar 7 2021 21:59:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.34851 * 125.89820 * 2 1 4 4 C 1.40943 * 107.46605 * 179.97438 * 3 2 1 5 5 C 1.50702 * 126.26614 * 180.02562 * 4 3 2 6 6 O 1.42902 * 109.46773 * 254.99948 * 5 4 3 7 7 Si 1.86299 * 109.47105 * 15.00098 * 5 4 3 8 8 C 1.34852 * 107.46493 * 0.02562 * 4 3 2 9 9 C 1.50703 * 125.89723 * 179.97438 * 8 4 3 10 10 N 1.36559 * 125.90113 * 180.26990 * 2 1 3 11 11 C 1.40229 * 125.66743 * 0.05361 * 10 2 1 12 12 C 1.38552 * 119.99304 * 64.89492 * 11 10 2 13 13 C 1.39501 * 119.78434 * 179.76820 * 12 11 10 14 14 C 1.47859 * 120.11527 * 180.22993 * 13 12 11 15 15 O 1.21553 * 119.99930 * 0.25701 * 14 13 12 16 16 N 1.34777 * 120.00302 * 180.25191 * 14 13 12 17 17 C 1.46501 * 120.00114 * 180.02562 * 16 14 13 18 18 H 1.08998 * 112.84638 * 336.19897 * 17 16 14 19 19 C 1.53774 * 113.61212 * 107.50311 * 17 16 14 20 20 C 1.53786 * 87.07888 * 89.11810 * 19 17 16 21 21 H 1.08996 * 113.69209 * 139.99354 * 20 19 17 22 22 O 1.42906 * 113.61360 * 270.88138 * 20 19 17 23 23 C 1.53776 * 87.08292 * 25.43196 * 20 19 17 24 24 C 1.39576 * 119.77279 * 0.48423 * 13 12 11 25 25 C 1.38021 * 119.98812 * 359.76974 * 24 13 12 26 26 C 1.38215 * 120.21370 * 359.97438 * 25 24 13 27 27 H 1.08997 * 109.47345 * 90.01958 * 1 2 3 28 28 H 1.09001 * 109.47256 * 210.02837 * 1 2 3 29 29 H 1.09003 * 109.46982 * 330.01766 * 1 2 3 30 30 H 1.07997 * 126.26668 * 359.94446 * 3 2 1 31 31 H 1.09000 * 109.46914 * 135.00305 * 5 4 3 32 32 H 0.96700 * 113.99701 * 60.00265 * 6 5 4 33 33 H 1.48502 * 110.00035 * 58.68172 * 7 5 4 34 34 H 1.48497 * 109.99993 * 179.97438 * 7 5 4 35 35 H 1.09002 * 109.47152 * 90.02525 * 9 8 4 36 36 H 1.09001 * 109.46980 * 330.02625 * 9 8 4 37 37 H 1.09004 * 109.47113 * 210.02606 * 9 8 4 38 38 H 1.07996 * 120.10772 * 0.02562 * 12 11 10 39 39 H 0.97003 * 119.99709 * 0.02562 * 16 14 13 40 40 H 1.08996 * 113.61585 * 203.66425 * 19 17 16 41 41 H 1.08997 * 113.62170 * 334.57178 * 19 17 16 42 42 H 0.96704 * 113.99666 * 277.49756 * 22 20 19 43 43 H 1.08998 * 113.61672 * 220.02133 * 23 20 19 44 44 H 1.09001 * 113.61654 * 89.11521 * 23 20 19 45 45 H 1.07999 * 120.01036 * 179.78674 * 24 13 12 46 46 H 1.07999 * 119.89308 * 180.02562 * 25 24 13 47 47 H 1.07998 * 119.88634 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6467 0.0006 5 6 4.8647 1.5176 0.0014 6 8 5.4556 1.5085 -1.2998 7 14 4.3909 3.2610 0.4560 8 6 3.6121 -0.7016 0.0004 9 6 4.8178 -1.6057 0.0003 10 7 2.3078 -1.1062 -0.0052 11 6 1.8644 -2.4365 -0.0125 12 6 1.1632 -2.9269 -1.1023 13 6 0.7284 -4.2524 -1.1071 14 6 -0.0160 -4.7848 -2.2684 15 8 -0.2460 -4.0685 -3.2231 16 7 -0.4394 -6.0643 -2.2684 17 6 -1.1765 -6.5919 -3.4193 18 1 -1.6721 -5.8124 -3.9980 19 6 -0.3598 -7.5731 -4.2766 20 6 -0.8866 -8.6898 -3.3598 21 1 -1.1479 -9.6053 -3.8904 22 8 -0.0637 -8.9271 -2.2158 23 6 -2.0917 -7.7784 -3.0734 24 6 0.9939 -5.0729 -0.0096 25 6 1.6886 -4.5731 1.0733 26 6 2.1238 -3.2613 1.0753 27 1 -0.3634 -0.0004 -1.0276 28 1 -0.3634 -0.8897 0.5143 29 1 -0.3633 0.8902 0.5136 30 1 1.9669 2.1204 -0.0008 31 1 5.5808 1.1344 0.7283 32 1 4.8735 1.8374 -1.9984 33 1 3.7463 3.2797 1.7937 34 1 5.5952 4.1298 0.4609 35 1 5.1081 -1.8242 1.0279 36 1 5.6425 -1.1113 -0.5130 37 1 4.5747 -2.5355 -0.5141 38 1 0.9576 -2.2862 -1.9470 39 1 -0.2561 -6.6358 -1.5064 40 1 -0.7111 -7.6509 -5.3055 41 1 0.7174 -7.4224 -4.2064 42 1 0.6959 -9.4997 -2.3897 43 1 -2.4125 -7.7932 -2.0318 44 1 -2.9164 -7.9122 -3.7734 45 1 0.6561 -6.0986 -0.0077 46 1 1.8935 -5.2094 1.9215 47 1 2.6672 -2.8758 1.9252 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_7348514_12335854.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 21:59:58 Heat of formation + Delta-G solvation = -6.018495 kcal Electronic energy + Delta-G solvation = -29832.672795 eV Core-core repulsion = 25755.895240 eV Total energy + Delta-G solvation = -4076.777556 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.91557 -41.63274 -40.27193 -39.14453 -37.68564 -36.09548 -34.70825 -33.76999 -33.66558 -32.28770 -30.44275 -30.16892 -27.23747 -26.78617 -26.29247 -24.84319 -24.33885 -23.70087 -22.07025 -21.05485 -20.69049 -20.39530 -18.89907 -18.13910 -17.64288 -17.50962 -17.38039 -17.15843 -16.69682 -16.34979 -16.04540 -16.01761 -15.52000 -15.30201 -15.15157 -15.04986 -14.81469 -14.68589 -14.35656 -14.18916 -14.01038 -13.84559 -13.59537 -13.52688 -13.46113 -13.28979 -13.20676 -12.96252 -12.78426 -12.66219 -12.47655 -12.34135 -12.15197 -11.80696 -11.49086 -11.25899 -10.70477 -10.50840 -10.36815 -10.29137 -10.08879 -9.53754 -8.85348 -4.92612 -0.48766 -0.09233 1.06492 1.43666 1.57835 1.63569 1.74098 1.82194 1.96944 2.03501 2.53024 3.10206 3.42270 3.46764 3.63534 3.64334 3.68986 3.73319 3.82273 3.86278 3.89365 3.96291 4.08651 4.13639 4.15033 4.31656 4.37846 4.42175 4.56602 4.61673 4.64157 4.67483 4.68602 4.71203 4.71346 4.79868 4.84464 4.94076 4.95384 4.97653 5.01312 5.02469 5.04057 5.09864 5.14561 5.34327 5.45208 5.51824 5.97477 6.13240 6.37265 6.43974 6.84184 6.84249 7.02613 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 C 0.012 3.988 3 C -0.193 4.193 4 C -0.205 4.205 5 C -0.037 4.037 6 O -0.560 6.560 7 Si 0.785 3.215 8 C 0.034 3.966 9 C -0.083 4.083 10 N -0.407 5.407 11 C 0.099 3.901 12 C -0.063 4.063 13 C -0.133 4.133 14 C 0.556 3.444 15 O -0.580 6.580 16 N -0.686 5.686 17 C 0.107 3.893 18 H 0.085 0.915 19 C -0.183 4.183 20 C 0.085 3.915 21 H 0.090 0.910 22 O -0.567 6.567 23 C -0.135 4.135 24 C -0.066 4.066 25 C -0.099 4.099 26 C -0.084 4.084 27 H 0.072 0.928 28 H 0.058 0.942 29 H 0.099 0.901 30 H 0.165 0.835 31 H 0.098 0.902 32 H 0.391 0.609 33 H -0.293 1.293 34 H -0.300 1.300 35 H 0.081 0.919 36 H 0.083 0.917 37 H 0.061 0.939 38 H 0.119 0.881 39 H 0.417 0.583 40 H 0.110 0.890 41 H 0.065 0.935 42 H 0.400 0.600 43 H 0.081 0.919 44 H 0.127 0.873 45 H 0.161 0.839 46 H 0.175 0.825 47 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.990 -7.137 1.529 7.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.096 4.096 3 C -0.217 4.217 4 C -0.212 4.212 5 C -0.148 4.148 6 O -0.368 6.368 7 Si 0.691 3.309 8 C -0.075 4.075 9 C -0.140 4.140 10 N -0.082 5.082 11 C 0.010 3.990 12 C -0.083 4.083 13 C -0.137 4.137 14 C 0.345 3.655 15 O -0.461 6.461 16 N -0.338 5.338 17 C 0.001 3.999 18 H 0.103 0.897 19 C -0.221 4.221 20 C 0.025 3.975 21 H 0.108 0.892 22 O -0.376 6.376 23 C -0.172 4.172 24 C -0.085 4.085 25 C -0.118 4.118 26 C -0.104 4.104 27 H 0.091 0.909 28 H 0.077 0.923 29 H 0.117 0.883 30 H 0.182 0.818 31 H 0.115 0.885 32 H 0.241 0.759 33 H -0.220 1.220 34 H -0.229 1.229 35 H 0.100 0.900 36 H 0.101 0.899 37 H 0.080 0.920 38 H 0.137 0.863 39 H 0.256 0.744 40 H 0.128 0.872 41 H 0.084 0.916 42 H 0.251 0.749 43 H 0.100 0.900 44 H 0.145 0.855 45 H 0.179 0.821 46 H 0.192 0.808 47 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -3.114 -6.182 2.021 7.211 hybrid contribution 0.759 -0.867 -0.019 1.153 sum -2.354 -7.049 2.001 7.697 Atomic orbital electron populations 1.20372 0.86807 1.03827 1.03034 1.20810 0.94410 0.85075 1.09346 1.20853 0.91538 0.98472 1.10803 1.19795 0.95369 0.92787 1.13237 1.24462 0.93308 1.08857 0.88192 1.86413 1.44229 1.88974 1.17167 0.93526 0.80542 0.74169 0.82619 1.20584 0.84318 0.94563 1.08083 1.20346 0.93185 0.97374 1.03125 1.41528 1.05699 1.03236 1.57724 1.17640 1.01828 0.83902 0.95680 1.21106 0.95697 0.94878 0.96603 1.19726 1.03360 0.94523 0.96051 1.18478 0.78568 0.82179 0.86307 1.90777 1.58603 1.59276 1.37421 1.45503 1.55889 1.11003 1.21419 1.21977 0.94134 0.95837 0.87948 0.89709 1.24152 1.00716 0.97049 1.00224 1.22762 0.91372 0.96739 0.86585 0.89205 1.86295 1.43322 1.73280 1.34681 1.23491 0.96819 0.92677 1.04251 1.21747 0.95095 1.00335 0.91273 1.21423 0.96478 0.94432 0.99424 1.21648 0.98053 0.94390 0.96259 0.90883 0.92317 0.88267 0.81777 0.88457 0.75949 1.21962 1.22857 0.90009 0.89856 0.92001 0.86298 0.74378 0.87218 0.91595 0.74905 0.90016 0.85481 0.82123 0.80794 0.83901 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.13 9.92 71.24 0.71 0.57 16 2 C 0.01 0.07 6.81 41.05 0.28 0.35 16 3 C -0.19 -0.87 9.27 22.15 0.21 -0.66 16 4 C -0.21 -1.21 5.35 -19.98 -0.11 -1.31 16 5 C -0.04 -0.16 2.50 71.24 0.18 0.02 16 6 O -0.56 -2.65 12.88 -148.98 -1.92 -4.57 16 7 Si 0.78 1.60 30.81 68.60 2.11 3.71 16 8 C 0.03 0.23 6.81 41.05 0.28 0.51 16 9 C -0.08 -0.27 9.72 71.24 0.69 0.42 16 10 N -0.41 -2.58 2.79 -320.36 -0.89 -3.48 16 11 C 0.10 0.41 4.66 38.04 0.18 0.59 16 12 C -0.06 -0.39 9.26 22.65 0.21 -0.18 16 13 C -0.13 -0.45 5.87 -20.10 -0.12 -0.57 16 14 C 0.56 3.98 7.77 86.79 0.67 4.65 16 15 O -0.58 -9.15 15.94 -3.88 -0.06 -9.21 16 16 N -0.69 -0.73 5.10 -442.90 -2.26 -2.99 16 17 C 0.11 0.04 4.32 45.52 0.20 0.24 16 18 H 0.08 0.39 7.46 -2.39 -0.02 0.37 16 19 C -0.18 0.52 7.71 31.12 0.24 0.76 16 20 C 0.08 -0.51 5.28 31.12 0.16 -0.35 16 21 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 22 O -0.57 3.50 12.31 -148.98 -1.83 1.67 16 23 C -0.13 0.66 7.66 31.12 0.24 0.90 16 24 C -0.07 0.24 9.54 22.54 0.21 0.46 16 25 C -0.10 0.53 10.02 22.21 0.22 0.75 16 26 C -0.08 0.07 9.72 22.44 0.22 0.29 16 27 H 0.07 0.12 8.14 -2.39 -0.02 0.11 16 28 H 0.06 0.13 7.84 -2.39 -0.02 0.11 16 29 H 0.10 -0.19 8.14 -2.39 -0.02 -0.21 16 30 H 0.16 -0.10 6.59 -2.91 -0.02 -0.12 16 31 H 0.10 0.49 7.96 -2.39 -0.02 0.47 16 32 H 0.39 -0.87 8.70 -74.06 -0.64 -1.51 16 33 H -0.29 -2.20 7.11 99.48 0.71 -1.50 16 34 H -0.30 -2.58 7.11 99.48 0.71 -1.88 16 35 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 36 H 0.08 0.36 7.87 -2.39 -0.02 0.35 16 37 H 0.06 0.20 7.83 -2.38 -0.02 0.18 16 38 H 0.12 1.26 7.65 -2.91 -0.02 1.24 16 39 H 0.42 -1.36 5.62 -92.71 -0.52 -1.88 16 40 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 41 H 0.07 -0.02 8.14 -2.39 -0.02 -0.03 16 42 H 0.40 -5.14 9.12 -74.05 -0.68 -5.82 16 43 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.13 -1.04 8.14 -2.39 -0.02 -1.06 16 45 H 0.16 -1.49 6.40 -2.91 -0.02 -1.51 16 46 H 0.17 -2.04 8.06 -2.91 -0.02 -2.06 16 47 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 Total: 0.00 -23.34 390.53 -0.96 -24.30 By element: Atomic # 1 Polarization: -16.08 SS G_CDS: -0.78 Total: -16.86 kcal Atomic # 6 Polarization: 2.75 SS G_CDS: 4.67 Total: 7.42 kcal Atomic # 7 Polarization: -3.31 SS G_CDS: -3.15 Total: -6.46 kcal Atomic # 8 Polarization: -8.30 SS G_CDS: -3.82 Total: -12.11 kcal Atomic # 14 Polarization: 1.60 SS G_CDS: 2.11 Total: 3.71 kcal Total: -23.34 -0.96 -24.30 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335854.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.282 kcal (2) G-P(sol) polarization free energy of solvation -23.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.055 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.964 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.301 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds