Wall clock time and date at job start Sun Mar 7 2021 22:00:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.34810 * 125.90282 * 2 1 4 4 C 1.40990 * 107.48472 * 180.19329 * 3 2 1 5 5 C 1.50703 * 126.25678 * 179.74764 * 4 3 2 6 6 O 1.42894 * 109.46885 * 255.01914 * 5 4 3 7 7 Si 1.86297 * 109.46936 * 15.02134 * 5 4 3 8 8 C 1.34808 * 107.48388 * 359.61804 * 4 3 2 9 9 C 1.50708 * 125.90113 * 180.13380 * 8 4 3 10 10 N 1.36647 * 108.19795 * 0.37743 * 8 4 3 11 11 C 1.39667 * 125.68664 * 179.79454 * 10 8 4 12 12 C 1.40196 * 120.15600 * 89.70300 * 11 10 8 13 13 C 1.47575 * 120.19195 * 359.97438 * 12 11 10 14 14 O 1.21590 * 119.99857 * 359.97438 * 13 12 11 15 15 N 1.34775 * 120.00240 * 179.97438 * 13 12 11 16 16 C 1.46503 * 120.00377 * 179.97438 * 15 13 12 17 17 H 1.08998 * 112.84890 * 336.20359 * 16 15 13 18 18 C 1.53778 * 113.61278 * 107.50564 * 16 15 13 19 19 C 1.53779 * 87.08321 * 89.11992 * 18 16 15 20 20 H 1.08994 * 113.69513 * 139.99284 * 19 18 16 21 21 O 1.42898 * 113.61377 * 270.88707 * 19 18 16 22 22 C 1.53776 * 113.61847 * 205.00516 * 16 15 13 23 23 C 1.39660 * 119.61533 * 179.77114 * 12 11 10 24 24 C 1.37824 * 119.91873 * 0.51231 * 23 12 11 25 25 C 1.38538 * 120.30677 * 359.74327 * 24 23 12 26 26 C 1.38070 * 120.39598 * 359.97438 * 25 24 23 27 27 H 1.09000 * 109.47580 * 90.02920 * 1 2 3 28 28 H 1.08996 * 109.47289 * 210.03135 * 1 2 3 29 29 H 1.09005 * 109.47303 * 330.02900 * 1 2 3 30 30 H 1.08002 * 126.25465 * 359.91894 * 3 2 1 31 31 H 1.08999 * 109.46748 * 135.02145 * 5 4 3 32 32 H 0.96700 * 114.00129 * 179.97438 * 6 5 4 33 33 H 1.48505 * 110.00024 * 178.68257 * 7 5 4 34 34 H 1.48497 * 110.00065 * 299.99852 * 7 5 4 35 35 H 1.08997 * 109.47212 * 270.28537 * 9 8 4 36 36 H 1.08998 * 109.47000 * 30.28331 * 9 8 4 37 37 H 1.09000 * 109.46933 * 150.28699 * 9 8 4 38 38 H 0.96998 * 119.99908 * 0.02562 * 15 13 12 39 39 H 1.08999 * 113.61375 * 203.66853 * 18 16 15 40 40 H 1.09004 * 113.61633 * 334.56785 * 18 16 15 41 41 H 0.96699 * 114.00002 * 277.49604 * 21 19 18 42 42 H 1.08999 * 113.61463 * 25.43036 * 22 16 15 43 43 H 1.08998 * 113.61557 * 156.33892 * 22 16 15 44 44 H 1.08002 * 120.03950 * 180.25224 * 23 12 11 45 45 H 1.07996 * 119.85062 * 179.71734 * 24 23 12 46 46 H 1.08001 * 119.80015 * 179.97438 * 25 24 23 47 47 H 1.07997 * 119.96177 * 179.97438 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2975 1.0920 0.0000 4 6 3.6352 0.6465 -0.0045 5 6 4.8647 1.5179 -0.0115 6 8 5.4493 1.5063 -1.3154 7 14 4.3923 3.2620 0.4418 8 6 3.6133 -0.7014 0.0014 9 6 4.8195 -1.6049 0.0024 10 7 2.3084 -1.1069 0.0010 11 6 1.8670 -2.4320 0.0020 12 6 1.6496 -3.1010 1.2148 13 6 1.8863 -2.4092 2.4967 14 8 2.2714 -1.2560 2.5031 15 7 1.6755 -3.0558 3.6603 16 6 1.9110 -2.3693 4.9329 17 1 2.6147 -1.5417 4.8435 18 6 0.6198 -2.0040 5.6839 19 6 0.7104 -3.3862 6.3518 20 1 0.4440 -3.3803 7.4087 21 8 0.0504 -4.4204 5.6190 22 6 2.2258 -3.3223 6.0980 23 6 1.2036 -4.4244 1.2027 24 6 0.9905 -5.0670 0.0022 25 6 1.2115 -4.4046 -1.1943 26 6 1.6468 -3.0943 -1.1973 27 1 -0.3634 -0.0005 -1.0276 28 1 -0.3633 -0.8897 0.5143 29 1 -0.3634 0.8903 0.5134 30 1 1.9666 2.1200 -0.0012 31 1 5.5844 1.1365 0.7128 32 1 6.2467 2.0477 -1.3938 33 1 5.6008 4.1247 0.4695 34 1 3.4113 3.7935 -0.5381 35 1 5.1108 -1.8231 -1.0250 36 1 5.6436 -1.1101 0.5164 37 1 4.5764 -2.5348 0.5164 38 1 1.3686 -3.9759 3.6552 39 1 0.7395 -1.1740 6.3802 40 1 -0.2468 -1.8897 5.0326 41 1 -0.9029 -4.4656 5.7744 42 1 2.6558 -4.2724 5.7810 43 1 2.7846 -2.8527 6.9075 44 1 1.0300 -4.9449 2.1329 45 1 0.6500 -6.0919 -0.0059 46 1 1.0423 -4.9162 -2.1303 47 1 1.8173 -2.5848 -2.1341 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12335856.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:03 Heat of formation + Delta-G solvation = 7.834642 kcal Electronic energy + Delta-G solvation = -31378.994437 eV Core-core repulsion = 27302.817599 eV Total energy + Delta-G solvation = -4076.176839 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -42.65747 -41.31317 -40.15547 -38.93023 -37.50934 -36.12570 -34.37090 -33.88652 -33.35320 -32.07449 -30.35925 -29.89736 -27.07433 -26.87096 -26.02883 -24.57430 -24.40827 -23.31300 -21.86320 -20.85338 -20.53480 -19.78984 -19.04557 -18.18168 -18.15753 -17.61508 -17.25773 -16.61388 -16.46509 -16.07898 -15.84133 -15.72016 -15.51149 -15.28199 -15.03503 -14.81858 -14.61301 -14.43927 -13.94947 -13.91874 -13.81598 -13.71094 -13.48354 -13.44469 -13.25312 -13.12111 -12.98478 -12.81099 -12.74578 -12.44997 -12.36755 -12.18675 -12.05024 -11.55501 -11.54710 -10.85948 -10.75830 -10.26209 -10.16177 -10.02093 -9.92794 -9.24296 -8.35732 -4.61835 -0.40543 -0.00617 1.50665 1.66909 1.83224 1.86744 2.03733 2.11674 2.19362 2.32671 2.61660 2.91209 3.39228 3.51844 3.57855 3.68545 3.77804 3.80179 3.84555 3.93894 4.02011 4.12006 4.15508 4.30855 4.40659 4.52587 4.54203 4.56935 4.59144 4.60660 4.63614 4.73840 4.79582 4.80887 4.83133 4.90062 4.91496 4.93497 4.96542 5.02894 5.11853 5.15940 5.19115 5.21047 5.52406 5.55825 5.60195 5.75010 6.40899 6.45799 6.55533 6.58652 6.81757 6.85404 7.28437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C 0.042 3.958 3 C -0.182 4.182 4 C -0.148 4.148 5 C -0.037 4.037 6 O -0.540 6.540 7 Si 0.692 3.308 8 C 0.071 3.929 9 C -0.079 4.079 10 N -0.394 5.394 11 C 0.172 3.828 12 C -0.126 4.126 13 C 0.549 3.451 14 O -0.502 6.502 15 N -0.703 5.703 16 C 0.128 3.872 17 H 0.106 0.894 18 C -0.184 4.184 19 C 0.077 3.923 20 H 0.072 0.928 21 O -0.555 6.555 22 C -0.142 4.142 23 C -0.081 4.081 24 C -0.114 4.114 25 C -0.084 4.084 26 C -0.113 4.113 27 H 0.068 0.932 28 H 0.056 0.944 29 H 0.080 0.920 30 H 0.137 0.863 31 H 0.062 0.938 32 H 0.371 0.629 33 H -0.269 1.269 34 H -0.257 1.257 35 H 0.070 0.930 36 H 0.078 0.922 37 H 0.055 0.945 38 H 0.405 0.595 39 H 0.100 0.900 40 H 0.076 0.924 41 H 0.385 0.615 42 H 0.082 0.918 43 H 0.110 0.890 44 H 0.135 0.865 45 H 0.137 0.863 46 H 0.138 0.862 47 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.859 -5.154 4.182 7.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.066 4.066 3 C -0.206 4.206 4 C -0.155 4.155 5 C -0.147 4.147 6 O -0.346 6.346 7 Si 0.594 3.406 8 C -0.038 4.038 9 C -0.136 4.136 10 N -0.069 5.069 11 C 0.081 3.919 12 C -0.130 4.130 13 C 0.335 3.665 14 O -0.376 6.376 15 N -0.357 5.357 16 C 0.023 3.977 17 H 0.124 0.876 18 C -0.223 4.223 19 C 0.018 3.982 20 H 0.090 0.910 21 O -0.362 6.362 22 C -0.180 4.180 23 C -0.100 4.100 24 C -0.132 4.132 25 C -0.103 4.103 26 C -0.132 4.132 27 H 0.086 0.914 28 H 0.075 0.925 29 H 0.099 0.901 30 H 0.154 0.846 31 H 0.080 0.920 32 H 0.218 0.782 33 H -0.195 1.195 34 H -0.182 1.182 35 H 0.088 0.912 36 H 0.096 0.904 37 H 0.074 0.926 38 H 0.242 0.758 39 H 0.118 0.882 40 H 0.095 0.905 41 H 0.233 0.767 42 H 0.101 0.899 43 H 0.128 0.872 44 H 0.153 0.847 45 H 0.155 0.845 46 H 0.156 0.844 47 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -2.605 -4.272 3.621 6.176 hybrid contribution 0.087 -0.578 -0.469 0.749 sum -2.519 -4.850 3.152 6.309 Atomic orbital electron populations 1.20254 0.88529 1.02921 1.02120 1.20060 0.92842 0.84654 1.09009 1.20388 0.91868 0.97256 1.11087 1.18260 0.92848 0.91515 1.12831 1.24002 0.94682 1.09395 0.86641 1.86640 1.45509 1.71636 1.30802 0.94692 0.81441 0.74307 0.90122 1.19911 0.83426 0.93606 1.06840 1.20236 0.93798 0.97368 1.02235 1.40888 1.05571 1.02125 1.58337 1.17505 0.98217 0.83964 0.92205 1.20225 1.04576 0.95145 0.93080 1.18100 0.78394 0.86522 0.83435 1.90919 1.43752 1.15869 1.87100 1.45564 1.68706 1.16986 1.04437 1.21722 0.97609 0.95922 0.82475 0.87643 1.24129 0.99478 0.98239 1.00439 1.22805 0.93929 0.87037 0.94479 0.91025 1.86339 1.25772 1.53943 1.70103 1.23462 0.95039 1.00872 0.98651 1.21330 0.96738 0.92697 0.99221 1.21283 0.99314 1.00726 0.91863 1.21339 0.96232 0.93634 0.99060 1.21383 0.99327 0.95181 0.97310 0.91376 0.92460 0.90123 0.84561 0.91999 0.78235 1.19456 1.18184 0.91176 0.90355 0.92608 0.75811 0.88187 0.90492 0.76669 0.89938 0.87158 0.84699 0.84468 0.84407 0.84537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.19 10.09 36.00 0.36 0.17 16 2 C 0.04 0.21 6.02 -81.66 -0.49 -0.28 16 3 C -0.18 -1.02 9.27 -39.76 -0.37 -1.38 16 4 C -0.15 -0.86 5.39 -104.80 -0.56 -1.42 16 5 C -0.04 -0.14 2.59 36.01 0.09 -0.05 16 6 O -0.54 -2.34 12.86 -35.23 -0.45 -2.79 16 7 Si 0.69 1.85 30.84 -169.99 -5.24 -3.39 16 8 C 0.07 0.39 5.98 -81.66 -0.49 -0.10 16 9 C -0.08 -0.28 9.87 36.01 0.36 0.08 16 10 N -0.39 -1.86 1.45 -52.35 -0.08 -1.94 16 11 C 0.17 0.49 4.52 -83.36 -0.38 0.11 16 12 C -0.13 -0.24 5.89 -104.82 -0.62 -0.85 16 13 C 0.55 1.70 7.77 -12.45 -0.10 1.61 16 14 O -0.50 -3.10 13.29 5.29 0.07 -3.03 16 15 N -0.70 -0.40 5.10 -54.05 -0.28 -0.68 16 16 C 0.13 0.00 4.32 -67.12 -0.29 -0.29 16 17 H 0.11 0.16 7.46 -51.93 -0.39 -0.23 16 18 C -0.18 0.24 7.71 -25.92 -0.20 0.04 16 19 C 0.08 -0.17 5.28 -25.92 -0.14 -0.30 16 20 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 21 O -0.56 1.15 12.31 -35.23 -0.43 0.72 16 22 C -0.14 0.26 7.66 -25.92 -0.20 0.06 16 23 C -0.08 0.07 9.53 -39.20 -0.37 -0.30 16 24 C -0.11 0.22 10.02 -39.62 -0.40 -0.18 16 25 C -0.08 0.11 10.03 -39.53 -0.40 -0.29 16 26 C -0.11 -0.10 9.96 -39.45 -0.39 -0.50 16 27 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 28 H 0.06 0.14 7.83 -51.93 -0.41 -0.26 16 29 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 30 H 0.14 0.60 6.55 -52.49 -0.34 0.25 16 31 H 0.06 0.16 7.50 -51.93 -0.39 -0.23 16 32 H 0.37 0.05 8.74 45.56 0.40 0.45 16 33 H -0.27 -1.06 7.11 56.52 0.40 -0.66 16 34 H -0.26 -1.43 7.05 56.52 0.40 -1.03 16 35 H 0.07 0.21 8.14 -51.93 -0.42 -0.21 16 36 H 0.08 0.22 7.50 -51.93 -0.39 -0.17 16 37 H 0.05 0.18 7.83 -51.93 -0.41 -0.22 16 38 H 0.40 -0.32 5.62 -40.82 -0.23 -0.55 16 39 H 0.10 -0.21 8.14 -51.93 -0.42 -0.64 16 40 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.39 -2.07 9.12 45.56 0.42 -1.66 16 42 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 43 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 44 H 0.14 -0.39 6.40 -52.49 -0.34 -0.73 16 45 H 0.14 -0.58 8.06 -52.49 -0.42 -1.00 16 46 H 0.14 -0.49 8.06 -52.49 -0.42 -0.91 16 47 H 0.14 0.09 8.06 -52.49 -0.42 -0.33 16 LS Contribution 385.78 15.07 5.81 5.81 Total: 0.00 -9.22 385.78 -11.10 -20.32 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -5.93 Total: -11.14 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -4.58 Total: -3.88 kcal Atomic # 7 Polarization: -2.26 SS G_CDS: -0.35 Total: -2.62 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.82 Total: -5.11 kcal Atomic # 14 Polarization: 1.85 SS G_CDS: -5.24 Total: -3.39 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -9.22 -11.10 -20.32 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335856.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.151 kcal (2) G-P(sol) polarization free energy of solvation -9.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.935 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.317 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds