Wall clock time and date at job start Sun Mar 7 2021 22:00:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.34861 * 125.89647 * 2 1 4 4 C 1.40947 * 107.46487 * 180.23773 * 3 2 1 5 5 C 1.50700 * 126.26471 * 179.75672 * 4 3 2 6 6 O 1.42901 * 109.46977 * 255.00143 * 5 4 3 7 7 Si 1.86300 * 109.46977 * 15.00321 * 5 4 3 8 8 C 1.34850 * 107.46556 * 359.76233 * 4 3 2 9 9 C 1.50705 * 125.89828 * 179.97438 * 8 4 3 10 10 N 1.36568 * 125.90219 * 179.82554 * 2 1 3 11 11 C 1.40194 * 125.66849 * 0.02562 * 10 2 1 12 12 C 1.38823 * 120.06710 * 294.69435 * 11 10 2 13 13 C 1.38119 * 119.93563 * 179.97438 * 12 11 10 14 14 C 1.38282 * 120.06614 * 0.02562 * 13 12 11 15 15 C 1.50699 * 119.93332 * 180.02562 * 14 13 12 16 16 C 1.50700 * 109.46929 * 90.00103 * 15 14 13 17 17 O 1.21282 * 120.00441 * 359.97438 * 16 15 14 18 18 N 1.34781 * 120.00105 * 180.02562 * 16 15 14 19 19 C 1.46501 * 120.00458 * 179.97438 * 18 16 15 20 20 H 1.09002 * 112.84560 * 23.80211 * 19 18 16 21 21 C 1.53777 * 113.61369 * 154.99466 * 19 18 16 22 22 C 1.53787 * 87.08065 * 89.20256 * 21 19 18 23 23 H 1.08992 * 113.61716 * 140.06309 * 22 21 19 24 24 O 1.42905 * 113.61154 * 270.88386 * 22 21 19 25 25 C 1.53780 * 87.17190 * 25.46879 * 22 21 19 26 26 C 1.38276 * 120.12957 * 0.26863 * 14 13 12 27 27 C 1.38119 * 120.06510 * 359.46062 * 26 14 13 28 28 H 1.08998 * 109.46632 * 270.17502 * 1 2 3 29 29 H 1.09004 * 109.47404 * 30.17462 * 1 2 3 30 30 H 1.09001 * 109.46849 * 150.17904 * 1 2 3 31 31 H 1.07992 * 126.26687 * 359.97438 * 3 2 1 32 32 H 1.09001 * 109.46664 * 135.00601 * 5 4 3 33 33 H 0.96700 * 114.00080 * 60.00593 * 6 5 4 34 34 H 1.48499 * 109.99851 * 58.67966 * 7 5 4 35 35 H 1.48498 * 109.99530 * 179.97438 * 7 5 4 36 36 H 1.08993 * 109.47235 * 270.02486 * 9 8 4 37 37 H 1.09005 * 109.46772 * 30.02403 * 9 8 4 38 38 H 1.08999 * 109.47053 * 150.01658 * 9 8 4 39 39 H 1.08004 * 120.03418 * 359.95364 * 12 11 10 40 40 H 1.08006 * 119.97090 * 179.97438 * 13 12 11 41 41 H 1.08997 * 109.47176 * 329.99685 * 15 14 13 42 42 H 1.09001 * 109.47069 * 209.99295 * 15 14 13 43 43 H 0.97004 * 119.99871 * 359.97438 * 18 16 15 44 44 H 1.08994 * 113.61853 * 334.65443 * 21 19 18 45 45 H 1.09002 * 113.61486 * 203.74784 * 21 19 18 46 46 H 0.96696 * 114.00036 * 178.46879 * 24 22 21 47 47 H 1.09007 * 113.61163 * 89.07369 * 25 22 21 48 48 H 1.08997 * 113.61950 * 219.97502 * 25 22 21 49 49 H 1.07997 * 119.96333 * 179.70262 * 26 14 13 50 50 H 1.07997 * 120.03710 * 180.27080 * 27 26 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0925 0.0000 4 6 3.6349 0.6468 -0.0056 5 6 4.8647 1.5178 -0.0128 6 8 5.4488 1.5064 -1.3169 7 14 4.3931 3.2619 0.4414 8 6 3.6122 -0.7015 -0.0034 9 6 4.8179 -1.6056 -0.0083 10 7 2.3078 -1.1062 0.0034 11 6 1.8646 -2.4363 0.0069 12 6 1.1682 -2.9344 1.0996 13 6 0.7323 -4.2450 1.1000 14 6 0.9895 -5.0610 0.0136 15 6 0.5121 -6.4903 0.0169 16 6 -0.8709 -6.5593 -0.5777 17 8 -1.4155 -5.5475 -0.9656 18 7 -1.5031 -7.7455 -0.6776 19 6 -2.8478 -7.8126 -1.2552 20 1 -3.0647 -6.9770 -1.9207 21 6 -3.1917 -9.1851 -1.8573 22 6 -3.7146 -9.5771 -0.4652 23 1 -4.6305 -10.1672 -0.4930 24 8 -2.7143 -10.1447 0.3830 25 6 -3.9545 -8.0785 -0.2172 26 6 1.6883 -4.5694 -1.0737 27 6 2.1218 -3.2580 -1.0822 28 1 -0.3632 0.0031 1.0277 29 1 -0.3634 0.8884 -0.5165 30 1 -0.3633 -0.8916 -0.5111 31 1 1.9669 2.1205 -0.0004 32 1 5.5846 1.1357 0.7111 33 1 4.8631 1.8341 -2.0131 34 1 3.7555 3.2828 1.7824 35 1 5.5974 4.1307 0.4385 36 1 5.1036 -1.8247 -1.0370 37 1 5.6450 -1.1108 0.5010 38 1 4.5772 -2.5349 0.5079 39 1 0.9676 -2.2978 1.9488 40 1 0.1908 -4.6333 1.9500 41 1 0.4863 -6.8624 1.0411 42 1 1.1929 -7.1022 -0.5749 43 1 -1.0677 -8.5548 -0.3670 44 1 -2.3178 -9.7553 -2.1720 45 1 -3.9692 -9.1447 -2.6203 46 1 -3.0314 -10.3717 1.2678 47 1 -4.9402 -7.7361 -0.5325 48 1 -3.6960 -7.7559 0.7914 49 1 1.8919 -5.2104 -1.9186 50 1 2.6637 -2.8733 -1.9334 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_7348514_12335864.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 22:00:08 Heat of formation + Delta-G solvation = -13.304029 kcal Electronic energy + Delta-G solvation = -31314.088634 eV Core-core repulsion = 27081.457535 eV Total energy + Delta-G solvation = -4232.631099 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 357.177 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.70161 -41.45302 -40.35431 -39.26823 -37.53513 -36.15695 -34.81382 -33.88511 -33.56204 -32.06062 -31.92076 -30.04075 -28.57723 -26.92090 -26.80685 -25.39719 -24.39094 -23.91674 -23.06787 -21.63355 -20.83839 -20.66890 -20.16388 -18.75913 -17.95147 -17.87987 -17.33835 -17.28521 -17.13936 -16.39606 -16.37049 -16.09096 -15.73131 -15.51931 -15.36738 -15.20935 -14.88763 -14.72126 -14.54376 -14.48568 -14.18192 -14.04036 -13.86628 -13.79674 -13.73528 -13.40357 -13.30812 -13.19792 -13.08767 -12.83312 -12.79219 -12.71300 -12.54250 -12.43555 -12.07052 -11.85275 -11.61617 -11.59967 -10.94836 -10.84647 -10.18188 -10.05617 -10.02840 -10.02462 -9.26553 -8.65158 -4.80557 -0.00875 0.30743 1.30110 1.58325 1.61472 1.84625 1.95556 2.01652 2.05167 2.20716 2.63346 2.89514 3.34828 3.50991 3.56116 3.67795 3.73159 3.79139 3.81902 3.89866 3.92007 3.98646 4.10555 4.12446 4.24056 4.27683 4.37957 4.44949 4.51014 4.52248 4.54972 4.56571 4.66932 4.68501 4.69349 4.74143 4.77065 4.80346 4.84664 4.86489 4.90122 4.92479 5.07233 5.10384 5.19322 5.23941 5.36710 5.45015 5.52310 5.54230 5.74296 6.15769 6.34616 6.42702 6.54719 6.65320 6.85019 7.23473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.027 3.973 3 C -0.188 4.188 4 C -0.198 4.198 5 C -0.031 4.031 6 O -0.546 6.546 7 Si 0.695 3.305 8 C 0.052 3.948 9 C -0.083 4.083 10 N -0.400 5.400 11 C 0.116 3.884 12 C -0.106 4.106 13 C -0.092 4.092 14 C -0.057 4.057 15 C -0.104 4.104 16 C 0.516 3.484 17 O -0.531 6.531 18 N -0.708 5.708 19 C 0.125 3.875 20 H 0.103 0.897 21 C -0.142 4.142 22 C 0.077 3.923 23 H 0.071 0.929 24 O -0.554 6.554 25 C -0.185 4.185 26 C -0.092 4.092 27 C -0.105 4.105 28 H 0.070 0.930 29 H 0.082 0.918 30 H 0.065 0.935 31 H 0.145 0.855 32 H 0.103 0.897 33 H 0.377 0.623 34 H -0.260 1.260 35 H -0.261 1.261 36 H 0.074 0.926 37 H 0.079 0.921 38 H 0.061 0.939 39 H 0.129 0.871 40 H 0.129 0.871 41 H 0.107 0.893 42 H 0.107 0.893 43 H 0.408 0.592 44 H 0.083 0.917 45 H 0.109 0.891 46 H 0.385 0.615 47 H 0.099 0.901 48 H 0.077 0.923 49 H 0.130 0.870 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.921 -5.814 0.182 7.015 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.081 4.081 3 C -0.211 4.211 4 C -0.205 4.205 5 C -0.142 4.142 6 O -0.351 6.351 7 Si 0.597 3.403 8 C -0.058 4.058 9 C -0.140 4.140 10 N -0.075 5.075 11 C 0.027 3.973 12 C -0.125 4.125 13 C -0.111 4.111 14 C -0.058 4.058 15 C -0.144 4.144 16 C 0.302 3.698 17 O -0.406 6.406 18 N -0.361 5.361 19 C 0.019 3.981 20 H 0.121 0.879 21 C -0.180 4.180 22 C 0.018 3.982 23 H 0.089 0.911 24 O -0.361 6.361 25 C -0.225 4.225 26 C -0.110 4.110 27 C -0.124 4.124 28 H 0.089 0.911 29 H 0.101 0.899 30 H 0.084 0.916 31 H 0.162 0.838 32 H 0.121 0.879 33 H 0.224 0.776 34 H -0.185 1.185 35 H -0.187 1.187 36 H 0.093 0.907 37 H 0.098 0.902 38 H 0.080 0.920 39 H 0.147 0.853 40 H 0.147 0.853 41 H 0.125 0.875 42 H 0.125 0.875 43 H 0.244 0.756 44 H 0.102 0.898 45 H 0.128 0.872 46 H 0.233 0.767 47 H 0.117 0.883 48 H 0.095 0.905 49 H 0.148 0.852 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -3.433 -4.865 0.282 5.961 hybrid contribution -0.168 -1.145 0.901 1.466 sum -3.602 -6.009 1.182 7.105 Atomic orbital electron populations 1.20340 0.87898 1.03463 1.02663 1.20406 0.93490 0.84916 1.09273 1.20536 0.91780 0.97470 1.11360 1.19607 0.94856 0.92636 1.13353 1.24301 0.93732 1.08048 0.88152 1.86455 1.43384 1.88761 1.16536 0.94646 0.83455 0.76975 0.85179 1.20247 0.83926 0.93942 1.07664 1.20303 0.93384 0.97466 1.02851 1.41437 1.05545 1.03078 1.57448 1.17644 1.00972 0.83286 0.95385 1.21114 0.98472 0.95840 0.97109 1.20871 0.98921 0.92882 0.98391 1.19349 0.97359 0.94563 0.94493 1.20696 0.94447 0.95321 1.03945 1.20539 0.87382 0.83299 0.78598 1.90752 1.67544 1.34401 1.47931 1.45691 1.16907 1.09933 1.63529 1.21790 0.82271 0.98628 0.95416 0.87888 1.23446 1.02818 0.95932 0.95792 1.22799 0.91017 0.92737 0.91692 0.91059 1.86352 1.38290 1.83303 1.28107 1.24184 0.99978 0.97254 1.01034 1.20885 0.97481 0.94931 0.97749 1.21132 1.00427 0.93797 0.97048 0.91132 0.89891 0.91639 0.83784 0.87918 0.77649 1.18479 1.18651 0.90747 0.90236 0.92038 0.85349 0.85274 0.87491 0.87467 0.75568 0.89816 0.87237 0.76665 0.88280 0.90475 0.85192 0.85256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.09 9.95 36.01 0.36 0.27 16 2 C 0.03 0.08 6.81 -81.68 -0.56 -0.48 16 3 C -0.19 -0.46 9.27 -39.75 -0.37 -0.83 16 4 C -0.20 -0.60 5.35 -104.80 -0.56 -1.16 16 5 C -0.03 -0.07 2.60 36.01 0.09 0.03 16 6 O -0.55 -1.25 12.88 -35.23 -0.45 -1.70 16 7 Si 0.69 0.79 30.81 -169.99 -5.24 -4.44 16 8 C 0.05 0.18 6.81 -81.68 -0.56 -0.38 16 9 C -0.08 -0.15 9.72 36.01 0.35 0.20 16 10 N -0.40 -1.31 2.79 -52.57 -0.15 -1.46 16 11 C 0.12 0.30 4.65 -83.60 -0.39 -0.09 16 12 C -0.11 -0.19 9.74 -39.41 -0.38 -0.57 16 13 C -0.09 -0.07 9.69 -39.61 -0.38 -0.46 16 14 C -0.06 -0.03 4.38 -104.59 -0.46 -0.49 16 15 C -0.10 0.18 5.83 -29.04 -0.17 0.01 16 16 C 0.52 0.53 7.82 -10.98 -0.09 0.44 16 17 O -0.53 -2.81 15.63 5.56 0.09 -2.73 16 18 N -0.71 0.51 5.16 -52.88 -0.27 0.24 16 19 C 0.12 -0.06 4.33 -66.98 -0.29 -0.35 16 20 H 0.10 0.12 7.46 -51.93 -0.39 -0.27 16 21 C -0.14 0.30 7.66 -25.92 -0.20 0.10 16 22 C 0.08 -0.19 5.27 -25.92 -0.14 -0.32 16 23 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 24 O -0.55 1.29 12.32 -35.23 -0.43 0.86 16 25 C -0.19 0.31 7.73 -25.78 -0.20 0.11 16 26 C -0.09 -0.07 9.69 -39.61 -0.38 -0.46 16 27 C -0.10 -0.19 9.72 -39.41 -0.38 -0.57 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.06 0.13 7.83 -51.93 -0.41 -0.28 16 31 H 0.14 0.03 6.59 -52.49 -0.35 -0.31 16 32 H 0.10 0.26 7.50 -51.93 -0.39 -0.13 16 33 H 0.38 -0.45 8.70 45.56 0.40 -0.06 16 34 H -0.26 -1.01 7.11 56.52 0.40 -0.61 16 35 H -0.26 -1.05 7.11 56.52 0.40 -0.65 16 36 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 37 H 0.08 0.12 7.50 -51.93 -0.39 -0.27 16 38 H 0.06 0.09 7.83 -51.93 -0.41 -0.32 16 39 H 0.13 0.16 8.06 -52.48 -0.42 -0.27 16 40 H 0.13 -0.12 8.06 -52.48 -0.42 -0.55 16 41 H 0.11 -0.40 8.08 -51.93 -0.42 -0.82 16 42 H 0.11 -0.40 8.08 -51.93 -0.42 -0.82 16 43 H 0.41 -0.89 7.60 -40.82 -0.31 -1.20 16 44 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 46 H 0.39 -2.17 9.12 45.56 0.42 -1.75 16 47 H 0.10 -0.24 8.14 -51.93 -0.42 -0.66 16 48 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 49 H 0.13 -0.12 8.06 -52.49 -0.42 -0.54 16 50 H 0.13 0.17 8.06 -52.49 -0.42 -0.25 16 LS Contribution 414.51 15.07 6.25 6.25 Total: 0.00 -9.55 414.51 -11.85 -21.39 By element: Atomic # 1 Polarization: -6.49 SS G_CDS: -6.93 Total: -13.42 kcal Atomic # 6 Polarization: -0.28 SS G_CDS: -4.70 Total: -4.99 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -0.42 Total: -1.22 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -0.80 Total: -3.57 kcal Atomic # 14 Polarization: 0.79 SS G_CDS: -5.24 Total: -4.44 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -9.55 -11.85 -21.39 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_7348514_12335864.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.090 kcal (2) G-P(sol) polarization free energy of solvation -9.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.394 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.304 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds